BLASTX nr result

ID: Coptis21_contig00002389 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002389
         (1276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ34000.1| unnamed protein product [Thellungiella halophila]     291   3e-76
emb|CAN64807.1| hypothetical protein VITISV_007145 [Vitis vinifera]   290   4e-76
ref|XP_002325404.1| predicted protein [Populus trichocarpa] gi|2...   290   5e-76
emb|CBI29919.3| unnamed protein product [Vitis vinifera]              287   4e-75
ref|XP_002282457.1| PREDICTED: thioredoxin-like 1-1, chloroplast...   287   4e-75

>dbj|BAJ34000.1| unnamed protein product [Thellungiella halophila]
          Length = 274

 Score =  291 bits (744), Expect = 3e-76
 Identities = 144/233 (61%), Positives = 173/233 (74%), Gaps = 4/233 (1%)
 Frame = +1

Query: 244 LRPPSLNSDFHGFRIVLPHVQR---KLSFASSSPIQMMSLCIGKAQRWWEKGIQQNMKEI 414
           L+   L S+FHG +I++  VQ    K SF SSS     +L IG +Q+WWEKG+Q+NM+EI
Sbjct: 42  LKQKPLRSEFHGKQILVGDVQNESFKKSFRSSSITAQTTLRIGTSQKWWEKGLQENMREI 101

Query: 415 GCAQDLANSLINAGDQLVIVDFFSPGCGGCKALHPKICQFAEMNPDVQFLQVNHEEHKSM 594
             AQ+L +SL NAGD+LV+VDFFSPGCGGCKALHPK+CQ AE NPDVQFLQVN+EEHKSM
Sbjct: 102 SSAQELVDSLTNAGDKLVVVDFFSPGCGGCKALHPKLCQLAEQNPDVQFLQVNYEEHKSM 161

Query: 595 CYSLNVHVLPFFRLYRGAHGRLCSFSCTNSTIKKFKDALAKHTTERCSLGPTKGXXXXXX 774
           CYSL VHVLPFFR YRGAHGR+CSFSCTN+TIKKF+DALAKHT +RCSLGPTKG      
Sbjct: 162 CYSLGVHVLPFFRFYRGAHGRVCSFSCTNATIKKFRDALAKHTPDRCSLGPTKGLEEKEL 221

Query: 775 XXXXXNKDLSFKYTPKPLLV-XXXXXXXXDKKVPLPSTSNKESKEKTLVTAGK 930
                NK+L+F YTPK + V         +  +P+P  S   S EKTLV+AG+
Sbjct: 222 VALAANKELNFSYTPKIVPVEEEAASPTSNPSLPVPHPSMSASDEKTLVSAGR 274


>emb|CAN64807.1| hypothetical protein VITISV_007145 [Vitis vinifera]
          Length = 311

 Score =  290 bits (743), Expect = 4e-76
 Identities = 152/252 (60%), Positives = 175/252 (69%), Gaps = 28/252 (11%)
 Frame = +1

Query: 244 LRPPSLNSDFHGFRIVLPHV----QRKLSFASSSPIQMMSLCIGKAQRWWEKGIQQNMKE 411
           L P S NSDFHG RIVL  +    +R+ + AS +   +M L IGKAQ+WWEKG+Q NMKE
Sbjct: 60  LSPSSSNSDFHGGRIVLQEIGSMPKRRNAQASCT---LMGLAIGKAQKWWEKGLQPNMKE 116

Query: 412 IGCAQDLANSLINAGDQLVIVDFFSPGCGGCKALHPKICQFAEMNPDVQFLQVNHEEHKS 591
           +  AQDL +SL+NAGD+LV+VDFFSPGCGGC+ALHPKICQ AEMNPDV+FLQVN+EEHKS
Sbjct: 117 VTGAQDLVDSLLNAGDKLVVVDFFSPGCGGCRALHPKICQLAEMNPDVEFLQVNYEEHKS 176

Query: 592 MCYSLNVHVLPFFRLYRGAHGRLCSFSCTNSTIKKFKDALAKHTTERCSLGPTKGXXXXX 771
           MCYSLNVHVLPFFR YRGAHGRLCSFSCTN+TIKKFKDALAKHT +RCSL PTKG     
Sbjct: 177 MCYSLNVHVLPFFRFYRGAHGRLCSFSCTNATIKKFKDALAKHTPDRCSLEPTKGLEEKE 236

Query: 772 XXXXXXNKDLSFKYTPKPLLVXXXXXXXXDK-------------------KVPLPSTSNK 894
                 NKD SF Y+PKP+          +                     +PLPSTS K
Sbjct: 237 LLALSANKDFSFNYSPKPVPTPAQEEIAVEATSAAAXSNXELPLPLPLPLSLPLPSTSLK 296

Query: 895 -----ESKEKTL 915
                E KEKT+
Sbjct: 297 GFHDSEVKEKTV 308


>ref|XP_002325404.1| predicted protein [Populus trichocarpa] gi|222862279|gb|EEE99785.1|
           predicted protein [Populus trichocarpa]
          Length = 295

 Score =  290 bits (742), Expect = 5e-76
 Identities = 147/240 (61%), Positives = 175/240 (72%), Gaps = 18/240 (7%)
 Frame = +1

Query: 265 SDFHGFRIVLPHVQ---RKLSFASSSPIQMMSLCIGKAQRWWEKGIQQNMKEIGCAQDLA 435
           SDF+G R+V+   Q   R+     +S + +  L +  A++WWEKG+Q NM+E+  AQDL 
Sbjct: 56  SDFYGKRVVVHGNQSKPRRGYLPQASVVALTGLKLKYAKKWWEKGLQPNMREVTSAQDLV 115

Query: 436 NSLINAGDQLVIVDFFSPGCGGCKALHPKICQFAEMNPDVQFLQVNHEEHKSMCYSLNVH 615
           +SL+NAGDQLV+VDFFSPGCGGCKALHPKICQ AEMNPDVQFLQVN+EEHKSMCYSLNVH
Sbjct: 116 DSLMNAGDQLVVVDFFSPGCGGCKALHPKICQLAEMNPDVQFLQVNYEEHKSMCYSLNVH 175

Query: 616 VLPFFRLYRGAHGRLCSFSCTNSTIKKFKDALAKHTTERCSLGPTKGXXXXXXXXXXXNK 795
           VLPFFR YRGAHGRLCSFSCTN+TIKKFKDALAKHT ERCSLGPTKG           NK
Sbjct: 176 VLPFFRFYRGAHGRLCSFSCTNATIKKFKDALAKHTPERCSLGPTKGLEEKELVALAANK 235

Query: 796 DLSFKYTPKPL----------LVXXXXXXXXDKKVPLP-----STSNKESKEKTLVTAGK 930
           DLSF YTPKP+          +         D+ +PLP     S S ++S+EKTLV++G+
Sbjct: 236 DLSFTYTPKPVQPAPVPAEEEVAPTAGPSHSDRGLPLPLPITSSKSAQDSEEKTLVSSGR 295


>emb|CBI29919.3| unnamed protein product [Vitis vinifera]
          Length = 309

 Score =  287 bits (735), Expect = 4e-75
 Identities = 151/252 (59%), Positives = 174/252 (69%), Gaps = 28/252 (11%)
 Frame = +1

Query: 244 LRPPSLNSDFHGFRIVLPHV----QRKLSFASSSPIQMMSLCIGKAQRWWEKGIQQNMKE 411
           L   S NSDFHG RIVL  +    +R+ + AS +   +M L IGKAQ+WWEKG+Q NMKE
Sbjct: 58  LSSSSSNSDFHGGRIVLQEIGSMPKRRNAQASCT---LMGLAIGKAQKWWEKGLQPNMKE 114

Query: 412 IGCAQDLANSLINAGDQLVIVDFFSPGCGGCKALHPKICQFAEMNPDVQFLQVNHEEHKS 591
           +  AQDL +SL+NAGD+LV+VDFFSPGCGGC+ALHPKICQ AEMNPDV+FLQVN+EEHKS
Sbjct: 115 VTGAQDLVDSLLNAGDKLVVVDFFSPGCGGCRALHPKICQLAEMNPDVEFLQVNYEEHKS 174

Query: 592 MCYSLNVHVLPFFRLYRGAHGRLCSFSCTNSTIKKFKDALAKHTTERCSLGPTKGXXXXX 771
           MCYSLNVHVLPFFR YRGAHGRLCSFSCTN+TIKKFKDALAKHT +RCSL PTKG     
Sbjct: 175 MCYSLNVHVLPFFRFYRGAHGRLCSFSCTNATIKKFKDALAKHTPDRCSLEPTKGLEEKE 234

Query: 772 XXXXXXNKDLSFKYTPKPLLVXXXXXXXXDK-------------------KVPLPSTSNK 894
                 NKD SF Y+PKP+          +                     +PLPSTS K
Sbjct: 235 LLALSANKDFSFNYSPKPVPTPAQEEIAVEATSAAAFSNEELPLPLPLPLSLPLPSTSLK 294

Query: 895 -----ESKEKTL 915
                E KEKT+
Sbjct: 295 GFHDSEVKEKTV 306


>ref|XP_002282457.1| PREDICTED: thioredoxin-like 1-1, chloroplastic-like [Vitis
           vinifera]
          Length = 311

 Score =  287 bits (735), Expect = 4e-75
 Identities = 151/252 (59%), Positives = 174/252 (69%), Gaps = 28/252 (11%)
 Frame = +1

Query: 244 LRPPSLNSDFHGFRIVLPHV----QRKLSFASSSPIQMMSLCIGKAQRWWEKGIQQNMKE 411
           L   S NSDFHG RIVL  +    +R+ + AS +   +M L IGKAQ+WWEKG+Q NMKE
Sbjct: 60  LSSSSSNSDFHGGRIVLQEIGSMPKRRNAQASCT---LMGLAIGKAQKWWEKGLQPNMKE 116

Query: 412 IGCAQDLANSLINAGDQLVIVDFFSPGCGGCKALHPKICQFAEMNPDVQFLQVNHEEHKS 591
           +  AQDL +SL+NAGD+LV+VDFFSPGCGGC+ALHPKICQ AEMNPDV+FLQVN+EEHKS
Sbjct: 117 VTGAQDLVDSLLNAGDKLVVVDFFSPGCGGCRALHPKICQLAEMNPDVEFLQVNYEEHKS 176

Query: 592 MCYSLNVHVLPFFRLYRGAHGRLCSFSCTNSTIKKFKDALAKHTTERCSLGPTKGXXXXX 771
           MCYSLNVHVLPFFR YRGAHGRLCSFSCTN+TIKKFKDALAKHT +RCSL PTKG     
Sbjct: 177 MCYSLNVHVLPFFRFYRGAHGRLCSFSCTNATIKKFKDALAKHTPDRCSLEPTKGLEEKE 236

Query: 772 XXXXXXNKDLSFKYTPKPLLVXXXXXXXXDK-------------------KVPLPSTSNK 894
                 NKD SF Y+PKP+          +                     +PLPSTS K
Sbjct: 237 LLALSANKDFSFNYSPKPVPTPAQEEIAVEATSAAAFSNEELPLPLPLPLSLPLPSTSLK 296

Query: 895 -----ESKEKTL 915
                E KEKT+
Sbjct: 297 GFHDSEVKEKTV 308


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