BLASTX nr result
ID: Coptis21_contig00002313
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00002313
(2526 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002283852.1| PREDICTED: F-box-like/WD repeat-containing p... 690 0.0
emb|CBI33743.3| unnamed protein product [Vitis vinifera] 670 0.0
ref|XP_004141895.1| PREDICTED: F-box-like/WD repeat-containing p... 669 0.0
ref|XP_002524944.1| Polyadenylation factor subunit, putative [Ri... 667 0.0
ref|XP_003524669.1| PREDICTED: F-box-like/WD repeat-containing p... 666 0.0
>ref|XP_002283852.1| PREDICTED: F-box-like/WD repeat-containing protein TBL1X-like isoform
1 [Vitis vinifera]
Length = 590
Score = 690 bits (1780), Expect = 0.0
Identities = 323/402 (80%), Positives = 356/402 (88%)
Frame = +2
Query: 719 IDRDPIRDREEKVDVKHEDSDVCGGPEPMDICTSLPSLPCQIPDSDVTILEGHTSEVFAC 898
ID + D+E+ V VKH+++ V GGPEPMDI TS C+IP SDVTILEGHTSEV AC
Sbjct: 189 IDTEMTTDQEDVVTVKHDENGVSGGPEPMDISTSSTFQACEIPSSDVTILEGHTSEVCAC 248
Query: 899 AWSPTGSLLASGSGDSTARIWTVAPGACSSSVQNGPPNVLVLKHFKGRTNEKSKDVTTID 1078
AWSP GSLLASGSGDSTARIWT+A G C SSVQNGP NVLVLKH KGRTNEKSKDVTT+D
Sbjct: 249 AWSPAGSLLASGSGDSTARIWTIADGTCRSSVQNGPSNVLVLKHVKGRTNEKSKDVTTLD 308
Query: 1079 WNGEGTHLATGSYDGQARIWGRDGELKSTLNKHKGPVFSLKWNKKGDYLLSGSVDKTAIV 1258
WNG+GT LATGSYDGQARIW +GEL+STL+KHKGP+FSLKWN+KGDYLL+GS DKTAIV
Sbjct: 309 WNGDGTLLATGSYDGQARIWSTNGELRSTLSKHKGPIFSLKWNRKGDYLLTGSCDKTAIV 368
Query: 1259 WDVRTGEWKQQFEFHTAPTLDVDWRNNNSFATCSTDAMIYVCKIGENRPIKTFSGHQGEV 1438
WDV+T EWKQQFEFH PTLDVDWRNN SFAT STD MIYVCKIGENRPIKTFSGHQGEV
Sbjct: 369 WDVKTEEWKQQFEFHAGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFSGHQGEV 428
Query: 1439 NAIKWDPTGSLLASCSDDGTAKIWSIKHDKYVHDLKEHVKEIYTIRWSPTGPGSINPNQQ 1618
N +KWDPTG LLASCSDD TAKIWSIK +KY+HDL+EH KEIYTIRWSPTG G+ NPNQ
Sbjct: 429 NCVKWDPTGQLLASCSDDITAKIWSIKQEKYLHDLREHAKEIYTIRWSPTGQGTNNPNQP 488
Query: 1619 LVLASASFDSTIKLWDVDTGSILHTFTGHREPVYSVAFSPNGEYLASGSLDKSMHIWSVK 1798
LVLASASFDST+KLWDV+ G +L + GHR+PVYSVAFSPNGEYLASGSLD+SMHIWS+K
Sbjct: 489 LVLASASFDSTVKLWDVEQGKLLCSLNGHRDPVYSVAFSPNGEYLASGSLDRSMHIWSLK 548
Query: 1799 EGKLVKTYTGDGGIFEVCWNKEGDKIAACFANNTVCVMDFKM 1924
E K+VKTYTG+GGIFEVCWNKEGDKIAACFANNTVCV+DF+M
Sbjct: 549 ERKIVKTYTGNGGIFEVCWNKEGDKIAACFANNTVCVLDFRM 590
Score = 143 bits (360), Expect = 3e-31
Identities = 70/98 (71%), Positives = 81/98 (82%)
Frame = +1
Query: 55 MASITSVELNYLVFRYLQESGFTHAAFALGYEAAINKSPIDGNLVPPGALITFVQKGLQY 234
M+SITS ELNYLVFRYL ESGFTH+AF+LGYEA INK PIDGN+VPPGALITFVQKGLQ+
Sbjct: 1 MSSITSAELNYLVFRYLHESGFTHSAFSLGYEAGINKCPIDGNMVPPGALITFVQKGLQF 60
Query: 235 LELEANLSTGXXXXXXXXXXXQPLDLITKDVYELQRMI 348
+E+EANLS QPLDLITKDV++L++MI
Sbjct: 61 VEMEANLSNSDTDVDDDFSFLQPLDLITKDVHQLRQMI 98
>emb|CBI33743.3| unnamed protein product [Vitis vinifera]
Length = 725
Score = 670 bits (1728), Expect = 0.0
Identities = 313/378 (82%), Positives = 340/378 (89%)
Frame = +2
Query: 791 GPEPMDICTSLPSLPCQIPDSDVTILEGHTSEVFACAWSPTGSLLASGSGDSTARIWTVA 970
GPEPMDI TS C+IP SDVTILEGHTSEV ACAWSP GSLLASGSGDSTARIWT+A
Sbjct: 348 GPEPMDISTSSTFQACEIPSSDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIA 407
Query: 971 PGACSSSVQNGPPNVLVLKHFKGRTNEKSKDVTTIDWNGEGTHLATGSYDGQARIWGRDG 1150
G C SSVQNGP NVLVLKH KGRTNEKSKDVTT+DWNG+GT LATGSYDGQARIW +G
Sbjct: 408 DGTCRSSVQNGPSNVLVLKHVKGRTNEKSKDVTTLDWNGDGTLLATGSYDGQARIWSTNG 467
Query: 1151 ELKSTLNKHKGPVFSLKWNKKGDYLLSGSVDKTAIVWDVRTGEWKQQFEFHTAPTLDVDW 1330
EL+STL+KHKGP+FSLKWN+KGDYLL+GS DKTAIVWDV+T EWKQQFEFH PTLDVDW
Sbjct: 468 ELRSTLSKHKGPIFSLKWNRKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHAGPTLDVDW 527
Query: 1331 RNNNSFATCSTDAMIYVCKIGENRPIKTFSGHQGEVNAIKWDPTGSLLASCSDDGTAKIW 1510
RNN SFAT STD MIYVCKIGENRPIKTFSGHQGEVN +KWDPTG LLASCSDD TAKIW
Sbjct: 528 RNNVSFATSSTDNMIYVCKIGENRPIKTFSGHQGEVNCVKWDPTGQLLASCSDDITAKIW 587
Query: 1511 SIKHDKYVHDLKEHVKEIYTIRWSPTGPGSINPNQQLVLASASFDSTIKLWDVDTGSILH 1690
SIK +KY+HDL+EH KEIYTIRWSPTG G+ NPNQ LVLASASFDST+KLWDV+ G +L
Sbjct: 588 SIKQEKYLHDLREHAKEIYTIRWSPTGQGTNNPNQPLVLASASFDSTVKLWDVEQGKLLC 647
Query: 1691 TFTGHREPVYSVAFSPNGEYLASGSLDKSMHIWSVKEGKLVKTYTGDGGIFEVCWNKEGD 1870
+ GHR+PVYSVAFSPNGEYLASGSLD+SMHIWS+KE K+VKTYTG+GGIFEVCWNKEGD
Sbjct: 648 SLNGHRDPVYSVAFSPNGEYLASGSLDRSMHIWSLKERKIVKTYTGNGGIFEVCWNKEGD 707
Query: 1871 KIAACFANNTVCVMDFKM 1924
KIAACFANNTVCV+DF+M
Sbjct: 708 KIAACFANNTVCVLDFRM 725
Score = 143 bits (360), Expect = 3e-31
Identities = 70/98 (71%), Positives = 81/98 (82%)
Frame = +1
Query: 55 MASITSVELNYLVFRYLQESGFTHAAFALGYEAAINKSPIDGNLVPPGALITFVQKGLQY 234
M+SITS ELNYLVFRYL ESGFTH+AF+LGYEA INK PIDGN+VPPGALITFVQKGLQ+
Sbjct: 1 MSSITSAELNYLVFRYLHESGFTHSAFSLGYEAGINKCPIDGNMVPPGALITFVQKGLQF 60
Query: 235 LELEANLSTGXXXXXXXXXXXQPLDLITKDVYELQRMI 348
+E+EANLS QPLDLITKDV++L++MI
Sbjct: 61 VEMEANLSNSDTDVDDDFSFLQPLDLITKDVHQLRQMI 98
>ref|XP_004141895.1| PREDICTED: F-box-like/WD repeat-containing protein TBL1XR1-like
[Cucumis sativus] gi|449513123|ref|XP_004164237.1|
PREDICTED: F-box-like/WD repeat-containing protein
TBL1XR1-like [Cucumis sativus]
Length = 594
Score = 669 bits (1726), Expect = 0.0
Identities = 316/401 (78%), Positives = 353/401 (88%)
Frame = +2
Query: 722 DRDPIRDREEKVDVKHEDSDVCGGPEPMDICTSLPSLPCQIPDSDVTILEGHTSEVFACA 901
DRD + D++EKV ++ V G EPMDI T+ S C+I SDVTIL+GHTSEV ACA
Sbjct: 196 DRDMVMDQDEKVHANQGENGVFG--EPMDISTTSTSQSCEISSSDVTILQGHTSEVCACA 253
Query: 902 WSPTGSLLASGSGDSTARIWTVAPGACSSSVQNGPPNVLVLKHFKGRTNEKSKDVTTIDW 1081
W+PTGSLLASGSGDSTARIW +A G+ S Q+GP NVLVLKH KGRTNEKSKDVTT+DW
Sbjct: 254 WNPTGSLLASGSGDSTARIWPIADGSSRSGGQSGPLNVLVLKHVKGRTNEKSKDVTTLDW 313
Query: 1082 NGEGTHLATGSYDGQARIWGRDGELKSTLNKHKGPVFSLKWNKKGDYLLSGSVDKTAIVW 1261
NG+GT LATGSYDGQARIW +GEL+STL+KHKGP+FSLKWNKKGDYLL+GS DKTAIVW
Sbjct: 314 NGDGTLLATGSYDGQARIWSTNGELRSTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVW 373
Query: 1262 DVRTGEWKQQFEFHTAPTLDVDWRNNNSFATCSTDAMIYVCKIGENRPIKTFSGHQGEVN 1441
DV+ EWKQQFEFH+ PTLDVDWRNN SFAT STD MIYVCKIGE RPIKTF+GHQGEVN
Sbjct: 374 DVKAEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGETRPIKTFAGHQGEVN 433
Query: 1442 AIKWDPTGSLLASCSDDGTAKIWSIKHDKYVHDLKEHVKEIYTIRWSPTGPGSINPNQQL 1621
+KWDPTGSLLASCSDD TAKIWS+K DKYV+DL+EH KEIYTIRWSPTGPG+ NPNQQL
Sbjct: 434 CVKWDPTGSLLASCSDDITAKIWSMKQDKYVYDLREHSKEIYTIRWSPTGPGTNNPNQQL 493
Query: 1622 VLASASFDSTIKLWDVDTGSILHTFTGHREPVYSVAFSPNGEYLASGSLDKSMHIWSVKE 1801
VLASASFDST+KLWDV+ G ++ + GHREPVYSVAFSPNGEYLASGSLDKSMHIWS+KE
Sbjct: 494 VLASASFDSTVKLWDVELGKLICSLNGHREPVYSVAFSPNGEYLASGSLDKSMHIWSLKE 553
Query: 1802 GKLVKTYTGDGGIFEVCWNKEGDKIAACFANNTVCVMDFKM 1924
GK+VKTYTG+GGIFEVCWNKEGDKIAACFANNTVCV+DF+M
Sbjct: 554 GKIVKTYTGNGGIFEVCWNKEGDKIAACFANNTVCVLDFRM 594
Score = 142 bits (357), Expect = 6e-31
Identities = 72/98 (73%), Positives = 79/98 (80%)
Frame = +1
Query: 55 MASITSVELNYLVFRYLQESGFTHAAFALGYEAAINKSPIDGNLVPPGALITFVQKGLQY 234
M SITSVELNYLVFRYLQESGF H+AFALGYEA INK IDGNLVPPGAL+T VQKGLQY
Sbjct: 1 MTSITSVELNYLVFRYLQESGFIHSAFALGYEAGINKCSIDGNLVPPGALVTVVQKGLQY 60
Query: 235 LELEANLSTGXXXXXXXXXXXQPLDLITKDVYELQRMI 348
LE+EANLS QPLDLITKDV+EL+++I
Sbjct: 61 LEMEANLSNNDTDIDEDFSFLQPLDLITKDVHELRQII 98
>ref|XP_002524944.1| Polyadenylation factor subunit, putative [Ricinus communis]
gi|223535779|gb|EEF37441.1| Polyadenylation factor
subunit, putative [Ricinus communis]
Length = 582
Score = 667 bits (1720), Expect = 0.0
Identities = 313/415 (75%), Positives = 354/415 (85%), Gaps = 14/415 (3%)
Frame = +2
Query: 722 DRDPIRDREEKVDVKHE--------------DSDVCGGPEPMDICTSLPSLPCQIPDSDV 859
DR+ + D+ +K +VKHE + + GGPEPMD+ + S C+IP SDV
Sbjct: 168 DRETVADQADKNNVKHENIKHENVKHENVKHEENGTGGPEPMDVSVTSTSQACEIPSSDV 227
Query: 860 TILEGHTSEVFACAWSPTGSLLASGSGDSTARIWTVAPGACSSSVQNGPPNVLVLKHFKG 1039
ILEGHTSEV ACAWSPTGSLLASGSGDSTARIW +A G S VQNGP NVLVLKH KG
Sbjct: 228 MILEGHTSEVCACAWSPTGSLLASGSGDSTARIWAIAEGTSRSGVQNGPLNVLVLKHVKG 287
Query: 1040 RTNEKSKDVTTIDWNGEGTHLATGSYDGQARIWGRDGELKSTLNKHKGPVFSLKWNKKGD 1219
RTNEKSKDVTT+DWNGEGT LATGSYDGQARIW GELK+TL+KHKGP+FSLKWNKKGD
Sbjct: 288 RTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWNTSGELKTTLSKHKGPIFSLKWNKKGD 347
Query: 1220 YLLSGSVDKTAIVWDVRTGEWKQQFEFHTAPTLDVDWRNNNSFATCSTDAMIYVCKIGEN 1399
+LL+GS DKTAIVWDV+T EWKQQFEFH+ P LDVDWRNN SFAT STD MIYVC++G+N
Sbjct: 348 FLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPILDVDWRNNTSFATSSTDNMIYVCRVGDN 407
Query: 1400 RPIKTFSGHQGEVNAIKWDPTGSLLASCSDDGTAKIWSIKHDKYVHDLKEHVKEIYTIRW 1579
RP+KTF+GHQGEVN +KWDPTGSLLASCSDD +AKIWS+K DKYVHDL+EH KEIYTIRW
Sbjct: 408 RPVKTFAGHQGEVNCVKWDPTGSLLASCSDDISAKIWSMKQDKYVHDLREHSKEIYTIRW 467
Query: 1580 SPTGPGSINPNQQLVLASASFDSTIKLWDVDTGSILHTFTGHREPVYSVAFSPNGEYLAS 1759
SPTGPG+ NPNQQLVLASASFDST+KLWDV+ G +L T +GHR+PVYSVAFSPNGEYLAS
Sbjct: 468 SPTGPGTNNPNQQLVLASASFDSTVKLWDVELGKLLCTLSGHRDPVYSVAFSPNGEYLAS 527
Query: 1760 GSLDKSMHIWSVKEGKLVKTYTGDGGIFEVCWNKEGDKIAACFANNTVCVMDFKM 1924
GSLD+S++IWS+KE K+VKTYTG GGIFEVCWNKEGDKIAACFANNTVCV+D +M
Sbjct: 528 GSLDRSINIWSLKEVKIVKTYTGQGGIFEVCWNKEGDKIAACFANNTVCVLDLRM 582
Score = 145 bits (367), Expect = 4e-32
Identities = 73/98 (74%), Positives = 80/98 (81%)
Frame = +1
Query: 55 MASITSVELNYLVFRYLQESGFTHAAFALGYEAAINKSPIDGNLVPPGALITFVQKGLQY 234
M +ITS ELNYLVFRYLQESGFTH+AFALGYEA INK IDGN+VPPGALITFVQKG+QY
Sbjct: 1 MTTITSSELNYLVFRYLQESGFTHSAFALGYEAGINKCTIDGNMVPPGALITFVQKGIQY 60
Query: 235 LELEANLSTGXXXXXXXXXXXQPLDLITKDVYELQRMI 348
LE+EANLS QPLDLITKDVYEL++MI
Sbjct: 61 LEMEANLSNSDADVDEDFSFLQPLDLITKDVYELRQMI 98
>ref|XP_003524669.1| PREDICTED: F-box-like/WD repeat-containing protein TBL1XR1-like
isoform 2 [Glycine max]
Length = 560
Score = 666 bits (1719), Expect = 0.0
Identities = 309/400 (77%), Positives = 350/400 (87%)
Frame = +2
Query: 725 RDPIRDREEKVDVKHEDSDVCGGPEPMDICTSLPSLPCQIPDSDVTILEGHTSEVFACAW 904
R+ D E++V VK E++ GGPEPMDI T+ S C IP SDVTILEGHTSEV ACAW
Sbjct: 161 REMFVDHEDRVPVKLEENGAVGGPEPMDISTTSTSQLCGIPSSDVTILEGHTSEVCACAW 220
Query: 905 SPTGSLLASGSGDSTARIWTVAPGACSSSVQNGPPNVLVLKHFKGRTNEKSKDVTTIDWN 1084
SPTGSLLASGSGDSTARIWT+A G C +NGP NVLVLKH +G+TNEKSKDVTT+DWN
Sbjct: 221 SPTGSLLASGSGDSTARIWTIAEGRCKPGSENGPLNVLVLKHVRGKTNEKSKDVTTLDWN 280
Query: 1085 GEGTHLATGSYDGQARIWGRDGELKSTLNKHKGPVFSLKWNKKGDYLLSGSVDKTAIVWD 1264
GEGT LATGSYDGQARIW +GELKSTL+KHKGP+FSLKWNKKGDYLL+GS D+TAIVWD
Sbjct: 281 GEGTLLATGSYDGQARIWTTNGELKSTLSKHKGPIFSLKWNKKGDYLLTGSCDQTAIVWD 340
Query: 1265 VRTGEWKQQFEFHTAPTLDVDWRNNNSFATCSTDAMIYVCKIGENRPIKTFSGHQGEVNA 1444
V+ EWKQQFEFH+ PTLDVDWRNN SFAT STD MI+VCKIGE PIKTF+GHQGEVN
Sbjct: 341 VKAEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIHVCKIGETHPIKTFTGHQGEVNC 400
Query: 1445 IKWDPTGSLLASCSDDGTAKIWSIKHDKYVHDLKEHVKEIYTIRWSPTGPGSINPNQQLV 1624
+KWDPTGSLLASCSDD TAKIWS+K D Y+HDL+EH KEIYTIRWSPTGPG+ NPN +LV
Sbjct: 401 VKWDPTGSLLASCSDDITAKIWSMKQDTYLHDLREHSKEIYTIRWSPTGPGTNNPNHKLV 460
Query: 1625 LASASFDSTIKLWDVDTGSILHTFTGHREPVYSVAFSPNGEYLASGSLDKSMHIWSVKEG 1804
LASASFDST+KLWDV+ G ++++ GHR PVYSVAFSPNG+YL SGSLD+SMHIWS+++G
Sbjct: 461 LASASFDSTVKLWDVELGKLIYSLDGHRHPVYSVAFSPNGDYLVSGSLDRSMHIWSLRDG 520
Query: 1805 KLVKTYTGDGGIFEVCWNKEGDKIAACFANNTVCVMDFKM 1924
K+VKTYTG+GGIFEVCWNKEGDKIAACFANNTVCV+DF+M
Sbjct: 521 KIVKTYTGNGGIFEVCWNKEGDKIAACFANNTVCVLDFRM 560
Score = 138 bits (347), Expect = 8e-30
Identities = 70/98 (71%), Positives = 77/98 (78%)
Frame = +1
Query: 55 MASITSVELNYLVFRYLQESGFTHAAFALGYEAAINKSPIDGNLVPPGALITFVQKGLQY 234
MASI+S ELNYLV+RYLQESGFTHAAF GYEA INK IDGNLVP GAL+TFVQKGLQY
Sbjct: 1 MASISSAELNYLVYRYLQESGFTHAAFTFGYEAGINKCSIDGNLVPSGALVTFVQKGLQY 60
Query: 235 LELEANLSTGXXXXXXXXXXXQPLDLITKDVYELQRMI 348
E+EANLS QPLDLITKDV+EL++MI
Sbjct: 61 FEMEANLSNCDADLEEDFSFLQPLDLITKDVHELRQMI 98