BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002256
         (1465 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275953.1| PREDICTED: succinyl-CoA ligase [ADP-forming]...   466   0.0  
ref|XP_003542431.1| PREDICTED: succinyl-CoA ligase [ADP-forming]...   447   0.0  
ref|XP_004140571.1| PREDICTED: succinyl-CoA ligase [ADP-forming]...   455   0.0  
ref|XP_003537078.1| PREDICTED: succinyl-CoA ligase [ADP-forming]...   447   e-180
ref|XP_002452471.1| hypothetical protein SORBIDRAFT_04g026360 [S...   456   e-180

>ref|XP_002275953.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
            mitochondrial [Vitis vinifera]
            gi|147782941|emb|CAN72294.1| hypothetical protein
            VITISV_037293 [Vitis vinifera]
            gi|297744178|emb|CBI37148.3| unnamed protein product
            [Vitis vinifera]
          Length = 423

 Score =  466 bits (1200), Expect(2) = 0.0
 Identities = 234/254 (92%), Positives = 248/254 (97%)
 Frame = +2

Query: 431  TTCGPLIIACRKGGTSIEDLAEKFPDMIIKVPIDVFKGITDEDAAKVVDGLNPKVADRDA 610
            ++ GP+IIACRKGGTSIEDLAEKFPDMI+KVPIDVF+GITDEDAAKVVDGL PKVADR+A
Sbjct: 152  SSAGPIIIACRKGGTSIEDLAEKFPDMIVKVPIDVFQGITDEDAAKVVDGLAPKVADRNA 211

Query: 611  SMEQVKKLYKLFCACDCTMLEINPLAETSDNQLVAADAKLNFDDNAAFRQKEIFALRDAS 790
            S+EQVKKLYKLFC CDCT+LEINP+AETSDNQLVAADAKLNFDDNAAFRQK IFALRDA+
Sbjct: 212  SIEQVKKLYKLFCECDCTLLEINPIAETSDNQLVAADAKLNFDDNAAFRQKHIFALRDAT 271

Query: 791  QEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEN 970
            QEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASE+
Sbjct: 272  QEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASES 331

Query: 971  QVVEAFKILTSDSKVKAILVNIFGGIMKCDIIASGIVNAAKQVDLKVPVVVRLEGTNVDQ 1150
            QVVEAFKILT+D KVKAILVNIFGGIMKCDIIASGIVNAAK+V LKVPVVVRLEGTNVDQ
Sbjct: 332  QVVEAFKILTADDKVKAILVNIFGGIMKCDIIASGIVNAAKEVSLKVPVVVRLEGTNVDQ 391

Query: 1151 GKRILKESGLALIT 1192
            GKRILKESG+ALIT
Sbjct: 392  GKRILKESGMALIT 405



 Score =  209 bits (532), Expect(2) = 0.0
 Identities = 100/122 (81%), Positives = 114/122 (93%)
 Frame = +1

Query: 1   RLNIHEYQGAELMSKYGINVPKGTVVSSVDQVKDAIKTFFPNENELVVKSQILAGGRGLG 180
           RLNIHEYQGAELMSKYGINVPKG  V S+++V+  I+  FP ENELVVKSQILAGGRGLG
Sbjct: 27  RLNIHEYQGAELMSKYGINVPKGVAVGSIEEVRKTIQDVFPKENELVVKSQILAGGRGLG 86

Query: 181 TFKSGLKGGVHIVKTEEVEDIAGKMLGQILVTKQTGPEGKIVSRVYLCQKLSLVNEMYFA 360
           TFKSGLKGGVHIVKT++VE++AGKMLGQILVTKQTGP+GK+VS+VYLC+K+SLVNEMYFA
Sbjct: 87  TFKSGLKGGVHIVKTDQVEELAGKMLGQILVTKQTGPQGKVVSKVYLCEKMSLVNEMYFA 146

Query: 361 IT 366
           IT
Sbjct: 147 IT 148


>ref|XP_003542431.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
            mitochondrial-like [Glycine max]
          Length = 422

 Score =  447 bits (1149), Expect(2) = 0.0
 Identities = 225/254 (88%), Positives = 240/254 (94%)
 Frame = +2

Query: 431  TTCGPLIIACRKGGTSIEDLAEKFPDMIIKVPIDVFKGITDEDAAKVVDGLNPKVADRDA 610
            T+ GP+IIAC KGGTSIEDLAEKFPDMIIKVP+DVF+GITDEDAAKVVDGL  KVADR+ 
Sbjct: 152  TSAGPIIIACSKGGTSIEDLAEKFPDMIIKVPVDVFEGITDEDAAKVVDGLALKVADRNK 211

Query: 611  SMEQVKKLYKLFCACDCTMLEINPLAETSDNQLVAADAKLNFDDNAAFRQKEIFALRDAS 790
            S+EQVK LYKLF  CDCT+LEINP+AET+DNQLVAADAKLNFDDNAA+RQKEIFALRD +
Sbjct: 212  SIEQVKNLYKLFVDCDCTLLEINPIAETADNQLVAADAKLNFDDNAAYRQKEIFALRDTT 271

Query: 791  QEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEN 970
            QEDPREV AAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASE 
Sbjct: 272  QEDPREVTAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEG 331

Query: 971  QVVEAFKILTSDSKVKAILVNIFGGIMKCDIIASGIVNAAKQVDLKVPVVVRLEGTNVDQ 1150
            QVVEAFKILT+D KVKAILVNIFGGIMKCD+IASGIVNAAK+V LKVPVVVRLEGTNVD 
Sbjct: 332  QVVEAFKILTADDKVKAILVNIFGGIMKCDVIASGIVNAAKEVALKVPVVVRLEGTNVDH 391

Query: 1151 GKRILKESGLALIT 1192
            GKRILKESG+ALIT
Sbjct: 392  GKRILKESGMALIT 405



 Score =  217 bits (552), Expect(2) = 0.0
 Identities = 106/122 (86%), Positives = 117/122 (95%)
 Frame = +1

Query: 1   RLNIHEYQGAELMSKYGINVPKGTVVSSVDQVKDAIKTFFPNENELVVKSQILAGGRGLG 180
           RLNIHEYQGAELMSK+G+NVP+G  VSSV++V+ AIK  FPNENELVVKSQILAGGRGLG
Sbjct: 27  RLNIHEYQGAELMSKHGVNVPRGVAVSSVEEVRKAIKDLFPNENELVVKSQILAGGRGLG 86

Query: 181 TFKSGLKGGVHIVKTEEVEDIAGKMLGQILVTKQTGPEGKIVSRVYLCQKLSLVNEMYFA 360
           TFKSGLKGGVHIVKT++VEDIAGKMLGQILVTKQTGP+GKIVS+VYLC+KLSLVNEMYFA
Sbjct: 87  TFKSGLKGGVHIVKTDQVEDIAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFA 146

Query: 361 IT 366
           IT
Sbjct: 147 IT 148


>ref|XP_004140571.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
            mitochondrial-like [Cucumis sativus]
            gi|449487361|ref|XP_004157588.1| PREDICTED: succinyl-CoA
            ligase [ADP-forming] subunit beta, mitochondrial-like
            [Cucumis sativus]
          Length = 421

 Score =  455 bits (1171), Expect(2) = 0.0
 Identities = 230/253 (90%), Positives = 239/253 (94%)
 Frame = +2

Query: 434  TCGPLIIACRKGGTSIEDLAEKFPDMIIKVPIDVFKGITDEDAAKVVDGLNPKVADRDAS 613
            T GPLIIACRKGGTSIEDLAE FPDMIIKVPIDVF+GITDEDAAKVVDGL PK ADR  S
Sbjct: 153  TAGPLIIACRKGGTSIEDLAENFPDMIIKVPIDVFQGITDEDAAKVVDGLAPKGADRQDS 212

Query: 614  MEQVKKLYKLFCACDCTMLEINPLAETSDNQLVAADAKLNFDDNAAFRQKEIFALRDASQ 793
            +EQVKKLYKLFC CDCT+LE+NP+AETSDNQLVAADAKLNFDDNAAFRQK IFALRD +Q
Sbjct: 213  IEQVKKLYKLFCECDCTLLEVNPMAETSDNQLVAADAKLNFDDNAAFRQKAIFALRDPTQ 272

Query: 794  EDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASENQ 973
            EDPREV AAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASE Q
Sbjct: 273  EDPREVDAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQ 332

Query: 974  VVEAFKILTSDSKVKAILVNIFGGIMKCDIIASGIVNAAKQVDLKVPVVVRLEGTNVDQG 1153
            VVEAFKILTSD KVKAILVNIFGGIMKCD+IASGIVNAAKQV LKVPV+VRLEGTNVDQG
Sbjct: 333  VVEAFKILTSDEKVKAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVIVRLEGTNVDQG 392

Query: 1154 KRILKESGLALIT 1192
            KRILKESG+ LIT
Sbjct: 393  KRILKESGMTLIT 405



 Score =  208 bits (529), Expect(2) = 0.0
 Identities = 102/122 (83%), Positives = 113/122 (92%)
 Frame = +1

Query: 1   RLNIHEYQGAELMSKYGINVPKGTVVSSVDQVKDAIKTFFPNENELVVKSQILAGGRGLG 180
           RLNIHEYQGAELMSKYGINVPKG  VSSVD+VK A++  FP+  ELVVKSQILAGGRGLG
Sbjct: 27  RLNIHEYQGAELMSKYGINVPKGLAVSSVDEVKSAMQAAFPDAKELVVKSQILAGGRGLG 86

Query: 181 TFKSGLKGGVHIVKTEEVEDIAGKMLGQILVTKQTGPEGKIVSRVYLCQKLSLVNEMYFA 360
           TFKSGLKGGVHIVK ++VE+IAGKMLGQILVTKQTGP+GK+VS+VYLC+KLSL NEMYFA
Sbjct: 87  TFKSGLKGGVHIVKVDQVEEIAGKMLGQILVTKQTGPQGKVVSKVYLCEKLSLTNEMYFA 146

Query: 361 IT 366
           IT
Sbjct: 147 IT 148


>ref|XP_003537078.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
            mitochondrial [Glycine max]
          Length = 422

 Score =  447 bits (1150), Expect(2) = e-180
 Identities = 225/254 (88%), Positives = 241/254 (94%)
 Frame = +2

Query: 431  TTCGPLIIACRKGGTSIEDLAEKFPDMIIKVPIDVFKGITDEDAAKVVDGLNPKVADRDA 610
            T+ GP+IIAC KGGTSIEDLAEKFPDMIIKVP+DVF+GITDE AAKVVDGL  KVADR+ 
Sbjct: 152  TSAGPIIIACSKGGTSIEDLAEKFPDMIIKVPVDVFEGITDEGAAKVVDGLALKVADRNK 211

Query: 611  SMEQVKKLYKLFCACDCTMLEINPLAETSDNQLVAADAKLNFDDNAAFRQKEIFALRDAS 790
            S+EQVK LYKLF  CDCT+LEINP+AET+DNQLVAADAKLNFDDNAA+RQKEIF+LRD +
Sbjct: 212  SIEQVKNLYKLFVDCDCTLLEINPIAETADNQLVAADAKLNFDDNAAYRQKEIFSLRDTT 271

Query: 791  QEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEN 970
            QEDPREV AAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEN
Sbjct: 272  QEDPREVTAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEN 331

Query: 971  QVVEAFKILTSDSKVKAILVNIFGGIMKCDIIASGIVNAAKQVDLKVPVVVRLEGTNVDQ 1150
            QVVEAFKILT+D KVKAILVNIFGGIMKCD+IASGIVNAAK+V LKVPVVVRLEGTNVDQ
Sbjct: 332  QVVEAFKILTADDKVKAILVNIFGGIMKCDVIASGIVNAAKEVALKVPVVVRLEGTNVDQ 391

Query: 1151 GKRILKESGLALIT 1192
            GKRILKESG+ALIT
Sbjct: 392  GKRILKESGMALIT 405



 Score =  214 bits (544), Expect(2) = e-180
 Identities = 104/122 (85%), Positives = 115/122 (94%)
 Frame = +1

Query: 1   RLNIHEYQGAELMSKYGINVPKGTVVSSVDQVKDAIKTFFPNENELVVKSQILAGGRGLG 180
           RLNIHEYQGAELMSK+G+NVP+G  VSSV++ +  IK  FPNENELVVKSQILAGGRGLG
Sbjct: 27  RLNIHEYQGAELMSKHGVNVPRGVAVSSVEEARKVIKDLFPNENELVVKSQILAGGRGLG 86

Query: 181 TFKSGLKGGVHIVKTEEVEDIAGKMLGQILVTKQTGPEGKIVSRVYLCQKLSLVNEMYFA 360
           TFKSGLKGGVHIVKT++VEDIAGKMLGQILVTKQTGP+GKIVS+VYLC+KLSLVNEMYFA
Sbjct: 87  TFKSGLKGGVHIVKTDQVEDIAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFA 146

Query: 361 IT 366
           IT
Sbjct: 147 IT 148


>ref|XP_002452471.1| hypothetical protein SORBIDRAFT_04g026360 [Sorghum bicolor]
            gi|241932302|gb|EES05447.1| hypothetical protein
            SORBIDRAFT_04g026360 [Sorghum bicolor]
          Length = 422

 Score =  456 bits (1172), Expect(2) = e-180
 Identities = 229/253 (90%), Positives = 242/253 (95%)
 Frame = +2

Query: 434  TCGPLIIACRKGGTSIEDLAEKFPDMIIKVPIDVFKGITDEDAAKVVDGLNPKVADRDAS 613
            T GPLIIAC KGGTSIEDLAEK+PDMIIKVPIDVFKGITDEDAAKVVDGL  K ADR +S
Sbjct: 153  TAGPLIIACSKGGTSIEDLAEKYPDMIIKVPIDVFKGITDEDAAKVVDGLALKAADRQSS 212

Query: 614  MEQVKKLYKLFCACDCTMLEINPLAETSDNQLVAADAKLNFDDNAAFRQKEIFALRDASQ 793
            +EQ+KKLY+LFC CDCT+LEINPLAET+DN+LVAADAKLNFDDNAAFRQKEIFALRD +Q
Sbjct: 213  IEQIKKLYELFCKCDCTLLEINPLAETADNKLVAADAKLNFDDNAAFRQKEIFALRDTTQ 272

Query: 794  EDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASENQ 973
            EDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGG+ASE Q
Sbjct: 273  EDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGSASEGQ 332

Query: 974  VVEAFKILTSDSKVKAILVNIFGGIMKCDIIASGIVNAAKQVDLKVPVVVRLEGTNVDQG 1153
            VVEAFKILTSD +VKAILVNIFGGIMKCD+IASGIVNAAKQVDLKVPVVVRLEGTNVDQG
Sbjct: 333  VVEAFKILTSDDRVKAILVNIFGGIMKCDVIASGIVNAAKQVDLKVPVVVRLEGTNVDQG 392

Query: 1154 KRILKESGLALIT 1192
            KRILKESG+ LIT
Sbjct: 393  KRILKESGMTLIT 405



 Score =  204 bits (520), Expect(2) = e-180
 Identities = 100/122 (81%), Positives = 108/122 (88%)
 Frame = +1

Query: 1   RLNIHEYQGAELMSKYGINVPKGTVVSSVDQVKDAIKTFFPNENELVVKSQILAGGRGLG 180
           RLNIHEYQGAELM KYGINVP+G    SV +VKDA+K  FP+E E+VVKSQILAGGRGLG
Sbjct: 27  RLNIHEYQGAELMGKYGINVPRGAAAGSVQEVKDALKNMFPSEKEIVVKSQILAGGRGLG 86

Query: 181 TFKSGLKGGVHIVKTEEVEDIAGKMLGQILVTKQTGPEGKIVSRVYLCQKLSLVNEMYFA 360
           TFKSGL+GGVHIVK EE E IA KMLGQILVTKQTGPEGKIVS+VYLC+KLSL NEMYFA
Sbjct: 87  TFKSGLQGGVHIVKAEEAESIASKMLGQILVTKQTGPEGKIVSKVYLCEKLSLTNEMYFA 146

Query: 361 IT 366
           IT
Sbjct: 147 IT 148