BLASTX nr result

ID: Coptis21_contig00002197 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002197
         (201 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302929.1| nbs-lrr resistance protein [Populus trichoca...    62   6e-08
emb|CAN62110.1| hypothetical protein VITISV_038734 [Vitis vinifera]    60   2e-07
emb|CAN81857.1| hypothetical protein VITISV_034960 [Vitis vinifera]    59   4e-07
emb|CBI29726.3| unnamed protein product [Vitis vinifera]               59   5e-07
ref|XP_002269572.2| PREDICTED: putative disease resistance prote...    57   1e-06

>ref|XP_002302929.1| nbs-lrr resistance protein [Populus trichocarpa]
            gi|222844655|gb|EEE82202.1| nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1063

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 33/65 (50%), Positives = 44/65 (67%)
 Frame = +3

Query: 3    LRNLTSLQELVVSNCRSLKSLSESSLQHLTALQKLRIWNCPELEIMSVDFQHLISLQYL* 182
            LR L+SL++LVV +C    SLSE  ++HLTAL+ L ++NCPEL  +    QHL SLQ L 
Sbjct: 974  LRGLSSLRDLVVGSCDKFISLSEG-VRHLTALENLSLYNCPELNSLPESIQHLTSLQSLS 1032

Query: 183  LVRLP 197
            +V  P
Sbjct: 1033 IVGCP 1037


>emb|CAN62110.1| hypothetical protein VITISV_038734 [Vitis vinifera]
          Length = 1625

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 32/60 (53%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
 Frame = +3

Query: 3    LRNLTSLQELVVSNCRSLKSLSESSLQHLTALQKLRIWNCPELE-IMSVDFQHLISLQYL 179
            L++LTSL+ L ++NCR L+SL+E  LQHLT+L+ L I NCP L+ +  V  QHL SL+ L
Sbjct: 1285 LQHLTSLKTLGINNCRMLQSLTEVGLQHLTSLESLWINNCPMLQSLTKVGLQHLTSLESL 1344



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 29/59 (49%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
 Frame = +3

Query: 6    RNLTSLQELVVSNCRSLKSLSESSLQHLTALQKLRIWNCPELE-IMSVDFQHLISLQYL 179
            ++L SL+ L +  C  L+SL+E+ LQHLT+L+KL I NCP L+ +  V  QHL SL+ L
Sbjct: 1236 QHLISLKRLEIYGCSRLQSLTEAGLQHLTSLEKLEIANCPMLQSLTKVGLQHLTSLKTL 1294


>emb|CAN81857.1| hypothetical protein VITISV_034960 [Vitis vinifera]
          Length = 1136

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 33/72 (45%), Positives = 45/72 (62%), Gaps = 7/72 (9%)
 Frame = +3

Query: 3    LRNLTSLQELVVSNCRSLKSLSESSLQHLTALQKLRIWNCPELEIM-------SVDFQHL 161
            L+ LTSL+ L + NC  L+ L+E  LQHLT+L+ L I NCP+L+ +       S   QHL
Sbjct: 916  LQQLTSLERLYIHNCHELQYLTEVGLQHLTSLETLYINNCPKLQHLTKQRLQDSRGLQHL 975

Query: 162  ISLQYL*LVRLP 197
            ISL+YL +   P
Sbjct: 976  ISLKYLGVENCP 987


>emb|CBI29726.3| unnamed protein product [Vitis vinifera]
          Length = 153

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 25/47 (53%), Positives = 39/47 (82%)
 Frame = +3

Query: 3   LRNLTSLQELVVSNCRSLKSLSESSLQHLTALQKLRIWNCPELEIMS 143
           L++LTSL EL +S C  L+SL+++ LQHLT+L+ LRIW+CP+L+ ++
Sbjct: 73  LQHLTSLIELKISGCPGLQSLTQAGLQHLTSLETLRIWDCPKLQYLT 119


>ref|XP_002269572.2| PREDICTED: putative disease resistance protein At3g14460-like [Vitis
            vinifera]
          Length = 1595

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 32/67 (47%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
 Frame = +3

Query: 3    LRNLTSLQELVVSNCRSLKSLSESSLQHLTALQKLRIWNCPELEIMS-VDFQHLISLQYL 179
            L+ LTSL  L ++NC  L+SL+E  LQHLT L+ L I  C EL+ ++ V FQHL SL+ L
Sbjct: 1233 LQQLTSLLNLKITNCPELQSLTEVGLQHLTFLEVLHINRCHELQYLTEVGFQHLTSLETL 1292

Query: 180  *LVRLPQ 200
             +   P+
Sbjct: 1293 HIYNCPK 1299


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