BLASTX nr result

ID: Coptis21_contig00002138 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002138
         (1027 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524093.1| conserved hypothetical protein [Ricinus comm...    61   4e-07

>ref|XP_002524093.1| conserved hypothetical protein [Ricinus communis]
            gi|223536661|gb|EEF38303.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 484

 Score = 61.2 bits (147), Expect = 4e-07
 Identities = 63/221 (28%), Positives = 99/221 (44%), Gaps = 12/221 (5%)
 Frame = +2

Query: 392  VVLENGNGVSEITPSVEGLALNVDKENEVADNGIDITETFPNADGLNASGVEGEALSNAS 571
            +VL++ +   EI P     A    KE ++A NG    +   NA+G        +A +N S
Sbjct: 7    IVLKHESVSEEINPEESASAPR--KEEKIAANG----QVPINANGTTEHVANVDANANVS 60

Query: 572  ETMGSNPPKKLGAVXXXXXXXXXXXXXXXSTV-VAXXXXXXXXXXXXFMSRGV-ANGLKK 745
            ET  SN  K+L                  ST   +            F ++GV A+ +K 
Sbjct: 61   ETKLSNSLKELATPSSKNNKMSKDKPNLKSTASFSRHQKPSLSQSLSFPAKGVRADNMKM 120

Query: 746  STDG-------KHVKTDTK---VNGTDSKSSVYARLSNPTRRVSTGGSSIETKPTVDGSA 895
            S DG       KH K D +   VN   S +S+   L+ P+RR+STG  S E+      + 
Sbjct: 121  SIDGHPTKTMSKHAKDDGRKGQVNSNGSGTSLSC-LTQPSRRLSTGVHSKESSGNDTKAI 179

Query: 896  PKRATLASVPSMRRSAPGKSDTVKASVDGPASEVTESHDQS 1018
             +R TLA++PS +++ P K  ++  S +   +EV+E  D +
Sbjct: 180  SRRTTLATMPSKQKAMPVKLSSLNESTNSLPAEVSELADNN 220


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