BLASTX nr result

ID: Coptis21_contig00002112 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002112
         (1196 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274536.1| PREDICTED: solute carrier family 25 member 4...   483   e-134
ref|XP_003594624.1| Solute carrier family 25 member [Medicago tr...   471   e-130
ref|XP_002312303.1| predicted protein [Populus trichocarpa] gi|2...   461   e-127
ref|XP_004147664.1| PREDICTED: solute carrier family 25 member 4...   459   e-127
ref|XP_002457772.1| hypothetical protein SORBIDRAFT_03g013340 [S...   449   e-124

>ref|XP_002274536.1| PREDICTED: solute carrier family 25 member 44 [Vitis vinifera]
            gi|297736782|emb|CBI25983.3| unnamed protein product
            [Vitis vinifera]
          Length = 324

 Score =  483 bits (1242), Expect = e-134
 Identities = 229/309 (74%), Positives = 264/309 (85%)
 Frame = -1

Query: 1196 ETDINWHRLDKTRFHVFGAVLFTAQLTILHPTAVVKTRMQVAGSGFGHMNGMSVFKNILK 1017
            ETDINW+RLDKTRFH+ GA+LFTAQ  +LHPTAVVKTRMQV GSG  HM G+SVF++ILK
Sbjct: 16   ETDINWNRLDKTRFHIIGAILFTAQSALLHPTAVVKTRMQVDGSGLSHMGGISVFRHILK 75

Query: 1016 TDGVPGIFRGFGTAAFGYMPVRVVSLTSLEVSKDMMLKYTKGFDIPEATRIGIANAVGGL 837
            +DG+PG+FRGFGT+A G +P RV++LTSLEVSKDMM KYTK  D+PEATR+GIAN V GL
Sbjct: 76   SDGIPGLFRGFGTSAIGSLPGRVLALTSLEVSKDMMFKYTKHLDMPEATRVGIANGVAGL 135

Query: 836  MSHLVCCAYCVPLDVIVQRLMVQGLPGTTVCNGAFDVIHKVIRTEGIRGLYRGFGLTALT 657
             S+LV C Y VPLDV+ QRLMVQGLPGT  C+G FDV+HKV++ EG RG+YRGFGLTA+T
Sbjct: 136  SSNLVSCVYYVPLDVVCQRLMVQGLPGTAYCSGPFDVVHKVMKAEGFRGMYRGFGLTAVT 195

Query: 656  QSPASALWWGAYGAAQHVIWRSLGYENDMDSKPSHIEMVTVQXXXXXXXXACSSVITTPI 477
            QSPA ALWWG YGAAQH+IWRSL Y  + + KPSH+EM TVQ        ACSSV+TTPI
Sbjct: 196  QSPAYALWWGVYGAAQHMIWRSLDYRENTERKPSHLEMATVQASAGIVAGACSSVVTTPI 255

Query: 476  DTIKTRLQVMDDYGFGRPSVMSTAKTLLAEEGWRGLYRGFGPRFLNMSLYGTSMIVTYEL 297
            DT+KTRLQVMD+YG GRPSVM TAKTLL E+GWRG YRGFGPRFLNMSLYGT+MIVTYEL
Sbjct: 256  DTVKTRLQVMDNYGAGRPSVMKTAKTLLKEDGWRGFYRGFGPRFLNMSLYGTTMIVTYEL 315

Query: 296  IKRLSVKEA 270
            IKRLS+K+A
Sbjct: 316  IKRLSLKQA 324


>ref|XP_003594624.1| Solute carrier family 25 member [Medicago truncatula]
            gi|355483672|gb|AES64875.1| Solute carrier family 25
            member [Medicago truncatula]
          Length = 323

 Score =  471 bits (1213), Expect = e-130
 Identities = 227/309 (73%), Positives = 265/309 (85%)
 Frame = -1

Query: 1196 ETDINWHRLDKTRFHVFGAVLFTAQLTILHPTAVVKTRMQVAGSGFGHMNGMSVFKNILK 1017
            +TDINW RLDKTRFH+ GAVLFTAQ  +LHPTAVVKTRMQVA SG  +M GMSVF +IL+
Sbjct: 15   DTDINWDRLDKTRFHIIGAVLFTAQSALLHPTAVVKTRMQVAASGLSNMKGMSVFTHILR 74

Query: 1016 TDGVPGIFRGFGTAAFGYMPVRVVSLTSLEVSKDMMLKYTKGFDIPEATRIGIANAVGGL 837
            +DG+PGIFRGFGT+A G MP RV++LTSLE+SKD MLK+T+G DIPEA+RIG+ANAV G+
Sbjct: 75   SDGIPGIFRGFGTSAIGSMPGRVLALTSLEMSKDFMLKHTQGSDIPEASRIGLANAVAGM 134

Query: 836  MSHLVCCAYCVPLDVIVQRLMVQGLPGTTVCNGAFDVIHKVIRTEGIRGLYRGFGLTALT 657
            +S+LV C Y VPLDVI QRLMVQGLPGTT C G FDVI +V+  EG+RGLYRGFGLTA++
Sbjct: 135  VSNLVSCVYFVPLDVICQRLMVQGLPGTTYCKGPFDVIRRVVHAEGVRGLYRGFGLTAVS 194

Query: 656  QSPASALWWGAYGAAQHVIWRSLGYENDMDSKPSHIEMVTVQXXXXXXXXACSSVITTPI 477
            QSPASALWWG+YGAAQH+IWRSLGY++DM+ KPSH+EMVTVQ        A SSVITTPI
Sbjct: 195  QSPASALWWGSYGAAQHIIWRSLGYKDDMEKKPSHVEMVTVQATAGMVAGASSSVITTPI 254

Query: 476  DTIKTRLQVMDDYGFGRPSVMSTAKTLLAEEGWRGLYRGFGPRFLNMSLYGTSMIVTYEL 297
            DT+KTRLQVMD+YG GRPSV+ TA+TLL E+GW G YRGFGPRFLNMSLYGT+MIVTYEL
Sbjct: 255  DTVKTRLQVMDNYGSGRPSVLKTARTLLKEDGWWGFYRGFGPRFLNMSLYGTTMIVTYEL 314

Query: 296  IKRLSVKEA 270
            I+ L +  A
Sbjct: 315  IRMLLLVRA 323


>ref|XP_002312303.1| predicted protein [Populus trichocarpa] gi|222852123|gb|EEE89670.1|
            predicted protein [Populus trichocarpa]
          Length = 334

 Score =  461 bits (1187), Expect = e-127
 Identities = 220/307 (71%), Positives = 256/307 (83%)
 Frame = -1

Query: 1196 ETDINWHRLDKTRFHVFGAVLFTAQLTILHPTAVVKTRMQVAGSGFGHMNGMSVFKNILK 1017
            +TDINW RLDKT+FH+ GAVLFT Q  +LHPTAVVKTRMQVA SG  HM G+SV K+IL+
Sbjct: 17   DTDINWARLDKTKFHIIGAVLFTVQQGLLHPTAVVKTRMQVADSGLSHMGGISVAKHILR 76

Query: 1016 TDGVPGIFRGFGTAAFGYMPVRVVSLTSLEVSKDMMLKYTKGFDIPEATRIGIANAVGGL 837
             DG+PG+FRGFGT+A G +P RV+SLT+LEVSKDMM KYT+  D+PEATR+GIAN V G+
Sbjct: 77   NDGIPGLFRGFGTSAIGALPGRVLSLTALEVSKDMMFKYTEALDMPEATRVGIANGVAGM 136

Query: 836  MSHLVCCAYCVPLDVIVQRLMVQGLPGTTVCNGAFDVIHKVIRTEGIRGLYRGFGLTALT 657
            +S+LV C Y VPLDVI QRLMVQGLPG     G FDV+ KV++TEG RGLYRGFGLTA+T
Sbjct: 137  LSNLVSCVYYVPLDVICQRLMVQGLPGVASYKGPFDVMCKVMKTEGFRGLYRGFGLTAVT 196

Query: 656  QSPASALWWGAYGAAQHVIWRSLGYENDMDSKPSHIEMVTVQXXXXXXXXACSSVITTPI 477
            Q PASALWWG YGAAQH+IWRS+GY +D+D KPSH+EMVTVQ        ACSS+ITTP+
Sbjct: 197  QPPASALWWGTYGAAQHIIWRSMGYRDDIDKKPSHLEMVTVQAMAGTVAGACSSIITTPM 256

Query: 476  DTIKTRLQVMDDYGFGRPSVMSTAKTLLAEEGWRGLYRGFGPRFLNMSLYGTSMIVTYEL 297
            DTIKTRLQVMD+YG GRPSV+ T KTLL E+GWRG YRGFGPRFLNMSLYGT+MIVTYEL
Sbjct: 257  DTIKTRLQVMDNYGSGRPSVLKTTKTLLKEDGWRGFYRGFGPRFLNMSLYGTTMIVTYEL 316

Query: 296  IKRLSVK 276
            I R+  +
Sbjct: 317  ITRMKAQ 323


>ref|XP_004147664.1| PREDICTED: solute carrier family 25 member 44-like [Cucumis sativus]
            gi|449514787|ref|XP_004164480.1| PREDICTED: solute
            carrier family 25 member 44-like [Cucumis sativus]
          Length = 327

 Score =  459 bits (1180), Expect = e-127
 Identities = 215/303 (70%), Positives = 256/303 (84%)
 Frame = -1

Query: 1196 ETDINWHRLDKTRFHVFGAVLFTAQLTILHPTAVVKTRMQVAGSGFGHMNGMSVFKNILK 1017
            +TDINW+RLDKT+FH+ GA+LFT Q  +LHPTAVVKTRMQV GSG  HM G+SVF NILK
Sbjct: 17   DTDINWNRLDKTKFHIIGAILFTVQSALLHPTAVVKTRMQVDGSGLSHMRGVSVFWNILK 76

Query: 1016 TDGVPGIFRGFGTAAFGYMPVRVVSLTSLEVSKDMMLKYTKGFDIPEATRIGIANAVGGL 837
            +DG+ G++RGFGT+A G +P RV++LTSLEVSKD+MLKYT+  ++PEATRIG+AN V G+
Sbjct: 77   SDGISGLYRGFGTSAIGSLPGRVLALTSLEVSKDIMLKYTENLEMPEATRIGLANGVAGM 136

Query: 836  MSHLVCCAYCVPLDVIVQRLMVQGLPGTTVCNGAFDVIHKVIRTEGIRGLYRGFGLTALT 657
            +S+LV C Y VPLDV+ QRLMVQGLPGTT CN   DV+ KV++ EG RGLYRGFGLTA+T
Sbjct: 137  ISNLVSCIYYVPLDVVCQRLMVQGLPGTTYCNSPLDVVRKVMKAEGFRGLYRGFGLTAVT 196

Query: 656  QSPASALWWGAYGAAQHVIWRSLGYENDMDSKPSHIEMVTVQXXXXXXXXACSSVITTPI 477
            QSPASALWWG YGAAQH+IWRSLGY + M+ KPSH+EMVTVQ        ACSSVITTPI
Sbjct: 197  QSPASALWWGVYGAAQHIIWRSLGYRDSMEKKPSHMEMVTVQATAGMVAGACSSVITTPI 256

Query: 476  DTIKTRLQVMDDYGFGRPSVMSTAKTLLAEEGWRGLYRGFGPRFLNMSLYGTSMIVTYEL 297
            DT+KTRLQV+D+YG GRPSV+ T++ LL E+GW G YRGFGPRFLNMSLYGT+MIVTYEL
Sbjct: 257  DTVKTRLQVIDNYGIGRPSVLKTSRALLKEDGWLGFYRGFGPRFLNMSLYGTTMIVTYEL 316

Query: 296  IKR 288
            I +
Sbjct: 317  ISK 319


>ref|XP_002457772.1| hypothetical protein SORBIDRAFT_03g013340 [Sorghum bicolor]
            gi|241929747|gb|EES02892.1| hypothetical protein
            SORBIDRAFT_03g013340 [Sorghum bicolor]
          Length = 328

 Score =  449 bits (1155), Expect = e-124
 Identities = 220/307 (71%), Positives = 250/307 (81%)
 Frame = -1

Query: 1196 ETDINWHRLDKTRFHVFGAVLFTAQLTILHPTAVVKTRMQVAGSGFGHMNGMSVFKNILK 1017
            E +INW RLDKTRFHV GA+LFTAQ   LHPTAVVKTRMQVA  G  HM+G +VF+ IL+
Sbjct: 20   EANINWERLDKTRFHVIGAILFTAQQGALHPTAVVKTRMQVAEGGLAHMSGFAVFRRILR 79

Query: 1016 TDGVPGIFRGFGTAAFGYMPVRVVSLTSLEVSKDMMLKYTKGFDIPEATRIGIANAVGGL 837
            +DG+PGIFRGFGT+A G +P RV++LTSLE+SK+MM KY + FD+ EA+RI +AN V GL
Sbjct: 80   SDGIPGIFRGFGTSAVGALPGRVLALTSLEISKEMMFKYCEHFDMSEASRIAVANGVAGL 139

Query: 836  MSHLVCCAYCVPLDVIVQRLMVQGLPGTTVCNGAFDVIHKVIRTEGIRGLYRGFGLTALT 657
            MS +  C+Y VPLDVI QRLMVQGLPG     G FDVI+KV+RTEGIRGLYRGFG+T LT
Sbjct: 140  MSSICSCSYFVPLDVICQRLMVQGLPGMATYRGPFDVINKVVRTEGIRGLYRGFGITMLT 199

Query: 656  QSPASALWWGAYGAAQHVIWRSLGYENDMDSKPSHIEMVTVQXXXXXXXXACSSVITTPI 477
            QSPASALWW AYG AQH IWRSLGY ND  +KPS  E+V VQ        ACSS+ITTPI
Sbjct: 200  QSPASALWWSAYGGAQHAIWRSLGYGNDSPTKPSQSELVAVQATAGTIAGACSSIITTPI 259

Query: 476  DTIKTRLQVMDDYGFGRPSVMSTAKTLLAEEGWRGLYRGFGPRFLNMSLYGTSMIVTYEL 297
            DTIKTRLQVMD+YG GRPSVM T + LL E+GWRG YRGFGPRFLNMSL+GTSMIVTYEL
Sbjct: 260  DTIKTRLQVMDNYGKGRPSVMKTTRLLLDEDGWRGFYRGFGPRFLNMSLWGTSMIVTYEL 319

Query: 296  IKRLSVK 276
            IKRLSVK
Sbjct: 320  IKRLSVK 326


Top