BLASTX nr result

ID: Coptis21_contig00002073 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002073
         (594 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002880102.1| calcium-binding EF hand family protein [Arab...   216   2e-54
ref|NP_566015.1| calcium-binding EF-hand-containing protein [Ara...   214   1e-53
ref|XP_002512195.1| calcium ion binding protein, putative [Ricin...   212   4e-53
ref|XP_002270910.1| PREDICTED: uncharacterized protein LOC100249...   210   2e-52
ref|XP_002330899.1| predicted protein [Populus trichocarpa] gi|1...   204   9e-51

>ref|XP_002880102.1| calcium-binding EF hand family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297325941|gb|EFH56361.1| calcium-binding EF
           hand family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 142

 Score =  216 bits (550), Expect = 2e-54
 Identities = 105/140 (75%), Positives = 124/140 (88%)
 Frame = -3

Query: 568 MGVVILDGTTVRSFIEDETEFSKTVDQRFKSLDLNSDGVLSRSELRNAFESFRLLESHFG 389
           MGVV++DG+TVRSF++DE +F K+VD+RF +LDLN DGVLSRSELR AFES RLLESHFG
Sbjct: 1   MGVVVIDGSTVRSFVDDEEQFKKSVDERFTALDLNKDGVLSRSELRKAFESMRLLESHFG 60

Query: 388 ISVVTPPQELTQLYDSIFEGFDEDHNGTVDLEEFRSEMKKIMLAIADGLGESPIQMVIDD 209
           + VVTPP ELT+LYDSIFE FD D +G+VDLEEFRSEMKKI+LAIADGLG  PI MV+DD
Sbjct: 61  VDVVTPPDELTKLYDSIFEKFDTDQSGSVDLEEFRSEMKKIVLAIADGLGSCPITMVLDD 120

Query: 208 DDQSFLKKAADLEASKIAQA 149
           D+ +FLKKAADLEASK+ +A
Sbjct: 121 DENNFLKKAADLEASKLEKA 140


>ref|NP_566015.1| calcium-binding EF-hand-containing protein [Arabidopsis thaliana]
           gi|3128177|gb|AAC16081.1| expressed protein [Arabidopsis
           thaliana] gi|18252875|gb|AAL62364.1| unknown protein
           [Arabidopsis thaliana] gi|21387065|gb|AAM47936.1|
           unknown protein [Arabidopsis thaliana]
           gi|21554910|gb|AAM63727.1| unknown [Arabidopsis
           thaliana] gi|330255313|gb|AEC10407.1| calcium-binding
           EF-hand-containing protein [Arabidopsis thaliana]
          Length = 142

 Score =  214 bits (544), Expect = 1e-53
 Identities = 105/140 (75%), Positives = 122/140 (87%)
 Frame = -3

Query: 568 MGVVILDGTTVRSFIEDETEFSKTVDQRFKSLDLNSDGVLSRSELRNAFESFRLLESHFG 389
           MGVV++DG+TVRSF++DE +F K+VD+RF +LDLN DGVLSRSELR AFES RLLESHFG
Sbjct: 1   MGVVLIDGSTVRSFVDDEEQFKKSVDERFAALDLNKDGVLSRSELRKAFESMRLLESHFG 60

Query: 388 ISVVTPPQELTQLYDSIFEGFDEDHNGTVDLEEFRSEMKKIMLAIADGLGESPIQMVIDD 209
           + VVTP  ELT LYDSIFE FD D +G+VDLEEFRSEMKKI+LAIADGLG  PI MV+DD
Sbjct: 61  VDVVTPQDELTNLYDSIFEKFDTDQSGSVDLEEFRSEMKKIVLAIADGLGSCPITMVLDD 120

Query: 208 DDQSFLKKAADLEASKIAQA 149
           DD +FLKKAADLEASK+ +A
Sbjct: 121 DDDNFLKKAADLEASKLEKA 140


>ref|XP_002512195.1| calcium ion binding protein, putative [Ricinus communis]
           gi|223548739|gb|EEF50229.1| calcium ion binding protein,
           putative [Ricinus communis]
          Length = 143

 Score =  212 bits (539), Expect = 4e-53
 Identities = 102/137 (74%), Positives = 121/137 (88%)
 Frame = -3

Query: 568 MGVVILDGTTVRSFIEDETEFSKTVDQRFKSLDLNSDGVLSRSELRNAFESFRLLESHFG 389
           MGVV++DG+TVR F+ DE +F K+VD+ F  LDLN+DGVLSRSELR AFES RL+ESHFG
Sbjct: 1   MGVVVIDGSTVRDFVNDEAQFKKSVDESFAQLDLNNDGVLSRSELRKAFESLRLIESHFG 60

Query: 388 ISVVTPPQELTQLYDSIFEGFDEDHNGTVDLEEFRSEMKKIMLAIADGLGESPIQMVIDD 209
           I VVTPP++LTQLYDSIFE FD D +GTVDL+EFR+E+KKI+LAIADGLG SPIQM ++D
Sbjct: 61  IDVVTPPEQLTQLYDSIFEKFDCDKSGTVDLDEFRTEIKKILLAIADGLGSSPIQMALED 120

Query: 208 DDQSFLKKAADLEASKI 158
           DDQ FLKKAADLEASK+
Sbjct: 121 DDQGFLKKAADLEASKL 137


>ref|XP_002270910.1| PREDICTED: uncharacterized protein LOC100249460 [Vitis vinifera]
          Length = 139

 Score =  210 bits (534), Expect = 2e-52
 Identities = 102/136 (75%), Positives = 120/136 (88%)
 Frame = -3

Query: 568 MGVVILDGTTVRSFIEDETEFSKTVDQRFKSLDLNSDGVLSRSELRNAFESFRLLESHFG 389
           MGVVI+DG+TVR F+ ++  F+K+VD RF +LDLN DGVLSRSELR AFE+FRLLE+HFG
Sbjct: 1   MGVVIIDGSTVRDFVGNDALFNKSVDDRFSALDLNGDGVLSRSELRKAFETFRLLEAHFG 60

Query: 388 ISVVTPPQELTQLYDSIFEGFDEDHNGTVDLEEFRSEMKKIMLAIADGLGESPIQMVIDD 209
           + VVTPP++LTQLYDSIF+ FD DH+ TVDLEEFRSEMKKIMLAIADGLG  PIQM ++D
Sbjct: 61  VDVVTPPEQLTQLYDSIFDKFDCDHSDTVDLEEFRSEMKKIMLAIADGLGSCPIQMALED 120

Query: 208 DDQSFLKKAADLEASK 161
           DDQ+FLKKAAD EASK
Sbjct: 121 DDQNFLKKAADFEASK 136


>ref|XP_002330899.1| predicted protein [Populus trichocarpa] gi|118484657|gb|ABK94199.1|
           unknown [Populus trichocarpa]
           gi|222872721|gb|EEF09852.1| predicted protein [Populus
           trichocarpa]
          Length = 146

 Score =  204 bits (519), Expect = 9e-51
 Identities = 97/139 (69%), Positives = 120/139 (86%)
 Frame = -3

Query: 568 MGVVILDGTTVRSFIEDETEFSKTVDQRFKSLDLNSDGVLSRSELRNAFESFRLLESHFG 389
           MGVVI+DG+TVR F+ DE +F+K+VD+ F  LDLN+DGVLSRSELR AFE+ RL+E+HFG
Sbjct: 1   MGVVIIDGSTVRDFVNDEAQFNKSVDEAFTKLDLNNDGVLSRSELRKAFETLRLIETHFG 60

Query: 388 ISVVTPPQELTQLYDSIFEGFDEDHNGTVDLEEFRSEMKKIMLAIADGLGESPIQMVIDD 209
           + V T P+ELT LYDSIF+ FD D +G+VDLEE+RSE+KKIMLAIADGLG SPIQM ++D
Sbjct: 61  VDVATAPEELTNLYDSIFDKFDCDQSGSVDLEEYRSELKKIMLAIADGLGSSPIQMALED 120

Query: 208 DDQSFLKKAADLEASKIAQ 152
           DDQ F+K+AADLEASK+ Q
Sbjct: 121 DDQGFIKQAADLEASKLPQ 139


Top