BLASTX nr result

ID: Coptis21_contig00001954 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001954
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520384.1| PREDICTED: uncharacterized protein LOC100795...    42   2e-06

>ref|XP_003520384.1| PREDICTED: uncharacterized protein LOC100795634 [Glycine max]
          Length = 1815

 Score = 41.6 bits (96), Expect(2) = 2e-06
 Identities = 21/52 (40%), Positives = 32/52 (61%)
 Frame = +2

Query: 5   LAKLRQIILKLKSVSVLECEACQLSLNCCSWSPCFKFHQFSSSNVVHSDIWG 160
           L KL+ ++  LK++ VL+CE+CQL  +  S  P       S+ + +HSDIWG
Sbjct: 598 LPKLKIMVPSLKNLRVLDCESCQLGKHVRSSFPQTVQRCDSAFSTIHSDIWG 649



 Score = 35.0 bits (79), Expect(2) = 2e-06
 Identities = 16/37 (43%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
 Frame = +1

Query: 181 FGFQWFAEFVDEMWRIN-LFLKEDCTEFLNLFDAFYN 288
           FGF++F  F+DE  R   ++L +D +E L +F +FYN
Sbjct: 656 FGFRYFVTFIDEFSRCTWVYLMKDRSELLPIFVSFYN 692


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