BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001918
         (1207 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pen...   361   2e-97
emb|CBI17645.3| unnamed protein product [Vitis vinifera]              361   2e-97
emb|CAN82640.1| hypothetical protein VITISV_028821 [Vitis vinifera]   361   2e-97
ref|XP_002514857.1| pentatricopeptide repeat-containing protein,...   341   2e-91
ref|XP_003552441.1| PREDICTED: putative pentatricopeptide repeat...   336   6e-90

>ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
            repeat-containing protein At3g23330 [Vitis vinifera]
          Length = 1008

 Score =  361 bits (926), Expect = 2e-97
 Identities = 198/256 (77%), Positives = 208/256 (81%), Gaps = 4/256 (1%)
 Frame = +1

Query: 247  DLGRRSKIVLEDNENDTT----DPDLAVFKDTTHLDLSDTVGLGILDAFFASLSMILVSE 414
            DLGRRSKIVLED E +TT    DPD      +  LDLS   GLG+ DAFFASLSMI+VSE
Sbjct: 42   DLGRRSKIVLEDLEVETTGDKKDPD------SISLDLSLDSGLGVFDAFFASLSMIIVSE 95

Query: 415  IGDETFIIAALMAMRHPKSIVLSGALSALVVMTVLSTGLGRIVPNLISRKHTNSAATVLY 594
            IGDETFIIAALMAMRHPKSIVLSGALSAL+VMTVLSTGLGRIVPNLISRKHTNSAATVLY
Sbjct: 96   IGDETFIIAALMAMRHPKSIVLSGALSALIVMTVLSTGLGRIVPNLISRKHTNSAATVLY 155

Query: 595  AFFGLRLLYIAWRSDSKGSQXXXXXXXXXXXXTQQGKTASRRFFSRFCTPIFLESFVLTF 774
            AFFGLRLLYIAWRSDSK SQ            + QGKT+ RRFFSRFCTPIFLESF+LTF
Sbjct: 156  AFFGLRLLYIAWRSDSKASQKKEMEEVEEKLESGQGKTSFRRFFSRFCTPIFLESFILTF 215

Query: 775  LAEWGDRSQIATIALATHKNAIGVAVGATLGHTICTSIAVVGGSMLASKISQGTVATVXX 954
            LAEWGDRSQIATIALATHKNAIGVAVGAT+GHTICTS+AVVGGSMLASKISQGTVATV  
Sbjct: 216  LAEWGDRSQIATIALATHKNAIGVAVGATIGHTICTSLAVVGGSMLASKISQGTVATVGG 275

Query: 955  XXXXXXXXXXXXXPPL 1002
                         PPL
Sbjct: 276  LLFLGFSLSSYFYPPL 291


>emb|CBI17645.3| unnamed protein product [Vitis vinifera]
          Length = 291

 Score =  361 bits (926), Expect = 2e-97
 Identities = 198/256 (77%), Positives = 208/256 (81%), Gaps = 4/256 (1%)
 Frame = +1

Query: 247  DLGRRSKIVLEDNENDTT----DPDLAVFKDTTHLDLSDTVGLGILDAFFASLSMILVSE 414
            DLGRRSKIVLED E +TT    DPD      +  LDLS   GLG+ DAFFASLSMI+VSE
Sbjct: 42   DLGRRSKIVLEDLEVETTGDKKDPD------SISLDLSLDSGLGVFDAFFASLSMIIVSE 95

Query: 415  IGDETFIIAALMAMRHPKSIVLSGALSALVVMTVLSTGLGRIVPNLISRKHTNSAATVLY 594
            IGDETFIIAALMAMRHPKSIVLSGALSAL+VMTVLSTGLGRIVPNLISRKHTNSAATVLY
Sbjct: 96   IGDETFIIAALMAMRHPKSIVLSGALSALIVMTVLSTGLGRIVPNLISRKHTNSAATVLY 155

Query: 595  AFFGLRLLYIAWRSDSKGSQXXXXXXXXXXXXTQQGKTASRRFFSRFCTPIFLESFVLTF 774
            AFFGLRLLYIAWRSDSK SQ            + QGKT+ RRFFSRFCTPIFLESF+LTF
Sbjct: 156  AFFGLRLLYIAWRSDSKASQKKEMEEVEEKLESGQGKTSFRRFFSRFCTPIFLESFILTF 215

Query: 775  LAEWGDRSQIATIALATHKNAIGVAVGATLGHTICTSIAVVGGSMLASKISQGTVATVXX 954
            LAEWGDRSQIATIALATHKNAIGVAVGAT+GHTICTS+AVVGGSMLASKISQGTVATV  
Sbjct: 216  LAEWGDRSQIATIALATHKNAIGVAVGATIGHTICTSLAVVGGSMLASKISQGTVATVGG 275

Query: 955  XXXXXXXXXXXXXPPL 1002
                         PPL
Sbjct: 276  LLFLGFSLSSYFYPPL 291


>emb|CAN82640.1| hypothetical protein VITISV_028821 [Vitis vinifera]
          Length = 291

 Score =  361 bits (926), Expect = 2e-97
 Identities = 198/256 (77%), Positives = 208/256 (81%), Gaps = 4/256 (1%)
 Frame = +1

Query: 247  DLGRRSKIVLEDNENDTT----DPDLAVFKDTTHLDLSDTVGLGILDAFFASLSMILVSE 414
            DLGRRSKIVLED E +TT    DPD      +  LDLS   GLG+ DAFFASLSMI+VSE
Sbjct: 42   DLGRRSKIVLEDLEVETTGDKKDPD------SISLDLSLDSGLGVFDAFFASLSMIIVSE 95

Query: 415  IGDETFIIAALMAMRHPKSIVLSGALSALVVMTVLSTGLGRIVPNLISRKHTNSAATVLY 594
            IGDETFIIAALMAMRHPKSIVLSGALSAL+VMTVLSTGLGRIVPNLISRKHTNSAATVLY
Sbjct: 96   IGDETFIIAALMAMRHPKSIVLSGALSALIVMTVLSTGLGRIVPNLISRKHTNSAATVLY 155

Query: 595  AFFGLRLLYIAWRSDSKGSQXXXXXXXXXXXXTQQGKTASRRFFSRFCTPIFLESFVLTF 774
            AFFGLRLLYIAWRSDSK SQ            + QGKT+ RRFFSRFCTPIFLESF+LTF
Sbjct: 156  AFFGLRLLYIAWRSDSKASQKKEMEEVEEKLESGQGKTSFRRFFSRFCTPIFLESFILTF 215

Query: 775  LAEWGDRSQIATIALATHKNAIGVAVGATLGHTICTSIAVVGGSMLASKISQGTVATVXX 954
            LAEWGDRSQIATIALATHKNAIGVAVGAT+GHTICTS+AVVGGSMLASKISQGTVATV  
Sbjct: 216  LAEWGDRSQIATIALATHKNAIGVAVGATIGHTICTSLAVVGGSMLASKISQGTVATVGG 275

Query: 955  XXXXXXXXXXXXXPPL 1002
                         PPL
Sbjct: 276  LLFLGFSLSSYFYPPL 291


>ref|XP_002514857.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223545908|gb|EEF47411.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 832

 Score =  341 bits (875), Expect = 2e-91
 Identities = 186/262 (70%), Positives = 203/262 (77%)
 Frame = +1

Query: 217  EAQVGKKPLKDLGRRSKIVLEDNENDTTDPDLAVFKDTTHLDLSDTVGLGILDAFFASLS 396
            E +     +KDLGRR  IV +D + ++ +  L       H+D     GLG+ DAF ASLS
Sbjct: 33   EKEESTASIKDLGRRGMIVTKDIDGNSVNLGL-------HVDS----GLGVFDAFIASLS 81

Query: 397  MILVSEIGDETFIIAALMAMRHPKSIVLSGALSALVVMTVLSTGLGRIVPNLISRKHTNS 576
            MI+VSEIGDETFIIAALMAMRHPKSIVLSGAL+AL+VMTVLSTGLGRIVPNLISRKHTNS
Sbjct: 82   MIIVSEIGDETFIIAALMAMRHPKSIVLSGALTALIVMTVLSTGLGRIVPNLISRKHTNS 141

Query: 577  AATVLYAFFGLRLLYIAWRSDSKGSQXXXXXXXXXXXXTQQGKTASRRFFSRFCTPIFLE 756
            AATVLYAFFGLRLLYIAWRSDSK SQ            + QGKT  RRFFSRFCTPIFLE
Sbjct: 142  AATVLYAFFGLRLLYIAWRSDSKVSQKKEMEEVEEKLESGQGKTTFRRFFSRFCTPIFLE 201

Query: 757  SFVLTFLAEWGDRSQIATIALATHKNAIGVAVGATLGHTICTSIAVVGGSMLASKISQGT 936
            SF+LTFLAEWGDRSQIATIALATHKNAIGVAVGAT+GHTICTS+AVVGGSMLASKISQGT
Sbjct: 202  SFILTFLAEWGDRSQIATIALATHKNAIGVAVGATIGHTICTSLAVVGGSMLASKISQGT 261

Query: 937  VATVXXXXXXXXXXXXXXXPPL 1002
            VAT+               PPL
Sbjct: 262  VATIGGLLFLGFSLSSYFYPPL 283


>ref|XP_003552441.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g23330-like [Glycine max]
          Length = 1011

 Score =  336 bits (862), Expect = 6e-90
 Identities = 187/254 (73%), Positives = 198/254 (77%), Gaps = 2/254 (0%)
 Frame = +1

Query: 247  DLGRRSKIVLEDNENDTTDPDLAVFKDTTHLDLS-DTVGLGILDAFFASLSMILVSEIGD 423
            DLGRR+KI L D END+             L L  D+ G G+ DAFFAS SMILVSEIGD
Sbjct: 48   DLGRRAKIALNDIENDSI------------LSLGLDSTGPGLFDAFFASFSMILVSEIGD 95

Query: 424  ETFIIAALMAMRHPKSIVLSGALSALVVMTVLSTGLGRIVPNLISRKHTNSAATVLYAFF 603
            ETFIIAALMAMRHPKSIVLSGALSAL++MTVLSTGLGRIVPNLISRKHTNSAATVLYAFF
Sbjct: 96   ETFIIAALMAMRHPKSIVLSGALSALIIMTVLSTGLGRIVPNLISRKHTNSAATVLYAFF 155

Query: 604  GLRLLYIAWR-SDSKGSQXXXXXXXXXXXXTQQGKTASRRFFSRFCTPIFLESFVLTFLA 780
            GLRLLYIAWR SDSK SQ              QGKT+ RRFFSRFCTPIFLESF+LTFLA
Sbjct: 156  GLRLLYIAWRSSDSKSSQKKEMEEVEEKLDGGQGKTSVRRFFSRFCTPIFLESFILTFLA 215

Query: 781  EWGDRSQIATIALATHKNAIGVAVGATLGHTICTSIAVVGGSMLASKISQGTVATVXXXX 960
            EWGDRSQIATIALATHKNAIGVAVGAT+GHTICTS+AVVGGSMLASKISQ +VATV    
Sbjct: 216  EWGDRSQIATIALATHKNAIGVAVGATIGHTICTSLAVVGGSMLASKISQRSVATVGGLL 275

Query: 961  XXXXXXXXXXXPPL 1002
                       PPL
Sbjct: 276  FIGFSISSYFYPPL 289