BLASTX nr result

ID: Coptis21_contig00001721 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001721
         (1203 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279802.1| PREDICTED: guanylate kinase isoform 1 [Vitis...   356   6e-96
ref|XP_004165842.1| PREDICTED: guanylate kinase-like isoform 1 [...   350   4e-94
gb|ACF84228.1| unknown [Zea mays]                                     349   9e-94
ref|XP_004134163.1| PREDICTED: guanylate kinase-like isoform 1 [...   348   1e-93
ref|XP_002312736.1| predicted protein [Populus trichocarpa] gi|2...   348   1e-93

>ref|XP_002279802.1| PREDICTED: guanylate kinase isoform 1 [Vitis vinifera]
           gi|359477474|ref|XP_003631981.1| PREDICTED: guanylate
           kinase isoform 2 [Vitis vinifera]
          Length = 295

 Score =  356 bits (914), Expect = 6e-96
 Identities = 186/257 (72%), Positives = 220/257 (85%), Gaps = 1/257 (0%)
 Frame = -1

Query: 981 YLKFKPQPQIIYPFMASDIKTIVSKRSPYKPLAPI-TADKPEIFRSLEAALGSPFGTEPI 805
           Y+K  P+P  I  +++S  K   ++R P  P+ P+ T ++ E+ R+LEA LGS F +EP+
Sbjct: 38  YIK-TPKPSAIR-YISSTSKMGDARRPPAVPIPPVDTENRSELLRALEATLGSSFSSEPL 95

Query: 804 SPPPKPLIIVISGPSGVGKDAVIKKLRGVREGIHFVVTATSRAMRPGEVEGIDYYFVSKE 625
           SPPPKP+IIVISGPSGVGKDAVIKKLR  REGIHFVVTATSRA R GEVEG DYYFVSKE
Sbjct: 96  SPPPKPIIIVISGPSGVGKDAVIKKLREAREGIHFVVTATSRAKREGEVEGKDYYFVSKE 155

Query: 624 QFLTMVERNELLEYALVYGDYKGIPKQQIREFMSKGYDIVLRVDIQGAATLKSILGNSAV 445
           +FL M+ RNELLEYALVYGDYKGIPKQ+IRE+M+ GYDIVLRVDIQGA+TL+ I G+SAV
Sbjct: 156 EFLGMISRNELLEYALVYGDYKGIPKQRIREYMTMGYDIVLRVDIQGASTLRKIFGDSAV 215

Query: 444 FIFLVAENETALVERLVERKTETTETLLVRIATARQEVKHVKEFDYVVVNAEGKLDNAVK 265
           FIFLVAE+E ALV+RL++RKTET ETLLVRIATAR+E+ H+K FDYVVVNAEGKL++AVK
Sbjct: 216 FIFLVAESELALVKRLIDRKTETKETLLVRIATAREEMNHMKNFDYVVVNAEGKLEDAVK 275

Query: 264 LVESIIDAEKAKVNQRN 214
           LVESIIDAEKAKV QR+
Sbjct: 276 LVESIIDAEKAKVRQRS 292


>ref|XP_004165842.1| PREDICTED: guanylate kinase-like isoform 1 [Cucumis sativus]
            gi|449517619|ref|XP_004165843.1| PREDICTED: guanylate
            kinase-like isoform 2 [Cucumis sativus]
          Length = 295

 Score =  350 bits (898), Expect = 4e-94
 Identities = 190/290 (65%), Positives = 226/290 (77%), Gaps = 19/290 (6%)
 Frame = -1

Query: 1026 RIF--TTLSHTPKLSSKY--------------LKFKPQPQ--IIYPFMASDIKTIVSKRS 901
            RIF  TTLS +  L +K+              LK KP     +  PF +S  +   ++R 
Sbjct: 3    RIFFATTLSRSSMLHTKFHNPIPFPNFLNPISLKSKPIQSFPLTPPFFSSISQMGDARRP 62

Query: 900  PYKPLAPIT-ADKPEIFRSLEAALGSPFGTEPISPPPKPLIIVISGPSGVGKDAVIKKLR 724
            P+  + P   AD+ E+ RSLE +L S F ++P+ P P PL+IVISGPSGVGKDAVIK+LR
Sbjct: 63   PFPTIPPPDKADRSELLRSLEFSLASSFSSDPLVPNPSPLVIVISGPSGVGKDAVIKRLR 122

Query: 723  GVREGIHFVVTATSRAMRPGEVEGIDYYFVSKEQFLTMVERNELLEYALVYGDYKGIPKQ 544
             VREG+HFVVTATSR MRPGEV+G DYYFVSKE FL M+ RNELLEYALVYGDYKGIPK+
Sbjct: 123  EVREGLHFVVTATSRPMRPGEVDGKDYYFVSKEDFLDMIARNELLEYALVYGDYKGIPKR 182

Query: 543  QIREFMSKGYDIVLRVDIQGAATLKSILGNSAVFIFLVAENETALVERLVERKTETTETL 364
            QIREFM+KGYDIVLRVD QGA TL+ +LGNSAVF+FL+AE+E  LVERL++RKTET E+L
Sbjct: 183  QIREFMAKGYDIVLRVDTQGAETLRKVLGNSAVFVFLMAESEVKLVERLIDRKTETKESL 242

Query: 363  LVRIATARQEVKHVKEFDYVVVNAEGKLDNAVKLVESIIDAEKAKVNQRN 214
            LVR+ATAR+EVKHVK FDYVVVNA+GKL++AVKLVESIIDAEKAKV QRN
Sbjct: 243  LVRVATAREEVKHVKNFDYVVVNADGKLESAVKLVESIIDAEKAKVLQRN 292


>gb|ACF84228.1| unknown [Zea mays]
          Length = 292

 Score =  349 bits (895), Expect = 9e-94
 Identities = 176/237 (74%), Positives = 210/237 (88%), Gaps = 1/237 (0%)
 Frame = -1

Query: 912 SKRSPYKPLAPIT-ADKPEIFRSLEAALGSPFGTEPISPPPKPLIIVISGPSGVGKDAVI 736
           S R P  P  P   ADK ++FR LEAALG+ F +EP++PPP+P+++VISGPSGVGKDAVI
Sbjct: 56  SHRPPPPPPPPHPGADKDQLFRGLEAALGTAFSSEPLAPPPQPMVLVISGPSGVGKDAVI 115

Query: 735 KKLRGVREGIHFVVTATSRAMRPGEVEGIDYYFVSKEQFLTMVERNELLEYALVYGDYKG 556
           K+L+  REGIHFVVTATSRAMRPGEVEG DYYFVSKE+FLTM+ER ELLEYALVYG+YKG
Sbjct: 116 KRLQEEREGIHFVVTATSRAMRPGEVEGKDYYFVSKEEFLTMIEREELLEYALVYGEYKG 175

Query: 555 IPKQQIREFMSKGYDIVLRVDIQGAATLKSILGNSAVFIFLVAENETALVERLVERKTET 376
           IPKQQIR++M+KG DIVLRVDIQGAATL+ ILG SAVFIFLVAE+E ALV+RL+ RKTET
Sbjct: 176 IPKQQIRDYMAKGCDIVLRVDIQGAATLRQILGESAVFIFLVAESEEALVKRLIHRKTET 235

Query: 375 TETLLVRIATARQEVKHVKEFDYVVVNAEGKLDNAVKLVESIIDAEKAKVNQRNVRI 205
           ++ LLVR+ATAR+EVKH+K FDYVVVNA+GKL+ AVK VESIIDAEK+K+++R+V I
Sbjct: 236 SDMLLVRVATAREEVKHMKNFDYVVVNAQGKLEEAVKQVESIIDAEKSKIHKRHVNI 292


>ref|XP_004134163.1| PREDICTED: guanylate kinase-like isoform 1 [Cucumis sativus]
            gi|449432755|ref|XP_004134164.1| PREDICTED: guanylate
            kinase-like isoform 2 [Cucumis sativus]
            gi|449432757|ref|XP_004134165.1| PREDICTED: guanylate
            kinase-like isoform 3 [Cucumis sativus]
          Length = 295

 Score =  348 bits (894), Expect = 1e-93
 Identities = 189/290 (65%), Positives = 226/290 (77%), Gaps = 19/290 (6%)
 Frame = -1

Query: 1026 RIF--TTLSHTPKLSSKY--------------LKFKPQPQ--IIYPFMASDIKTIVSKRS 901
            RIF  TTLS +  L +K+              LK KP     +  PF +S  +   ++R 
Sbjct: 3    RIFFATTLSRSSMLHTKFHNPIPFPNFLNPISLKSKPIQSFPLTPPFFSSISQMGDARRP 62

Query: 900  PYKPLAPIT-ADKPEIFRSLEAALGSPFGTEPISPPPKPLIIVISGPSGVGKDAVIKKLR 724
            P+  + P   AD+ E+ RSLE +L S F ++P+ P P PL+IVISGPSGVGKDAVIK+LR
Sbjct: 63   PFPTIPPPDKADRSELLRSLEFSLASSFSSDPLVPNPSPLVIVISGPSGVGKDAVIKRLR 122

Query: 723  GVREGIHFVVTATSRAMRPGEVEGIDYYFVSKEQFLTMVERNELLEYALVYGDYKGIPKQ 544
             VREG+HFVVTATSR MRPGEV+G DYYFVSKE FL M+ RNELLEYALVYGDYKGIPK+
Sbjct: 123  EVREGLHFVVTATSRPMRPGEVDGKDYYFVSKEDFLDMIARNELLEYALVYGDYKGIPKR 182

Query: 543  QIREFMSKGYDIVLRVDIQGAATLKSILGNSAVFIFLVAENETALVERLVERKTETTETL 364
            QIREFM+KGYDIVLRVD QGA TL+ +LGNSAVF+FL+AE+E  LVERL++RKTET E+L
Sbjct: 183  QIREFMAKGYDIVLRVDTQGAETLRKVLGNSAVFVFLMAESEVKLVERLIDRKTETKESL 242

Query: 363  LVRIATARQEVKHVKEFDYVVVNAEGKLDNAVKLVESIIDAEKAKVNQRN 214
            LVR+ATAR+EVKHVK FDYVVVNA+GKL++AVKLVESIIDAEKAKV +RN
Sbjct: 243  LVRVATAREEVKHVKNFDYVVVNADGKLESAVKLVESIIDAEKAKVLRRN 292


>ref|XP_002312736.1| predicted protein [Populus trichocarpa] gi|222852556|gb|EEE90103.1|
           predicted protein [Populus trichocarpa]
          Length = 223

 Score =  348 bits (894), Expect = 1e-93
 Identities = 176/222 (79%), Positives = 198/222 (89%)
 Frame = -1

Query: 882 PITADKPEIFRSLEAALGSPFGTEPISPPPKPLIIVISGPSGVGKDAVIKKLRGVREGIH 703
           P    KPE+ R+LE +LGS F T PI PPP PLIIVISGPSGVGKDA+IKKLR VRE +H
Sbjct: 2   PDKVSKPEMLRALEFSLGSSFSTNPIFPPPNPLIIVISGPSGVGKDAIIKKLRQVRESLH 61

Query: 702 FVVTATSRAMRPGEVEGIDYYFVSKEQFLTMVERNELLEYALVYGDYKGIPKQQIREFMS 523
           FVVTATSR MR GEV+G DYYFVSKE+FL+MVERNELLEYALVYGDYKGIPK+QIREFM 
Sbjct: 62  FVVTATSRPMREGEVDGKDYYFVSKEEFLSMVERNELLEYALVYGDYKGIPKKQIREFME 121

Query: 522 KGYDIVLRVDIQGAATLKSILGNSAVFIFLVAENETALVERLVERKTETTETLLVRIATA 343
           KG+DIVLRVD+QGA TL+ ILGNSAVFI+LVAE+E  LV+RL++RKTET+E LLVRIATA
Sbjct: 122 KGHDIVLRVDVQGAETLRKILGNSAVFIYLVAESELELVKRLIDRKTETSEALLVRIATA 181

Query: 342 RQEVKHVKEFDYVVVNAEGKLDNAVKLVESIIDAEKAKVNQR 217
           R+EVKHV++FDYVVVN EGKLD+AVKLVESIIDAEKAKV QR
Sbjct: 182 REEVKHVRDFDYVVVNGEGKLDSAVKLVESIIDAEKAKVRQR 223


Top