BLASTX nr result

ID: Coptis21_contig00001587 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001587
         (1574 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280005.1| PREDICTED: minor histocompatibility antigen ...   536   e-150
ref|XP_002313995.1| predicted protein [Populus trichocarpa] gi|1...   534   e-149
ref|XP_002527044.1| Minor histocompatibility antigen H13, putati...   530   e-148
ref|XP_002298474.1| predicted protein [Populus trichocarpa] gi|2...   528   e-147
ref|XP_003526473.1| PREDICTED: minor histocompatibility antigen ...   524   e-146

>ref|XP_002280005.1| PREDICTED: minor histocompatibility antigen H13 [Vitis vinifera]
            gi|296083844|emb|CBI24232.3| unnamed protein product
            [Vitis vinifera]
          Length = 341

 Score =  536 bits (1380), Expect = e-150
 Identities = 263/331 (79%), Positives = 282/331 (85%)
 Frame = +2

Query: 92   MISSERVANLALAGLTLAXXXXXXXXXXXXXXTACLTVYVGCYRSVKPTPPTETMSNEHA 271
            M + ER+ANL LAGLTLA              TACLTVYVGCYRSVKPTPP+ETMSNEHA
Sbjct: 1    MKNCERLANLGLAGLTLAPLVMKVDPNLNVILTACLTVYVGCYRSVKPTPPSETMSNEHA 60

Query: 272  MRFPLIGSAMXXXXXXXXXXXXXDLVNAVLTCYFFVLGILALSATLLPAIRRFLPKTWND 451
            MRFP +GSAM             DLVNAVLTCYFFVLGI+ALSATLLPAIRR+LPK WND
Sbjct: 61   MRFPFVGSAMLLSLFLLFKFLSKDLVNAVLTCYFFVLGIIALSATLLPAIRRYLPKHWND 120

Query: 452  NIISWHLPYFRSVEIEFTISQCIAAIPGTFFCVWYAKQKHWLANNILGLAFCIQGIEMLS 631
            + I WH PYFRS+EIEFT SQ +AAIPGTFFC WYA QKHWLANNILGLAFCIQGIEMLS
Sbjct: 121  DPIIWHFPYFRSLEIEFTRSQIVAAIPGTFFCAWYASQKHWLANNILGLAFCIQGIEMLS 180

Query: 632  LGSFKTGGILLAGLFFYDIFWVFFTPVMVSVAKSFDAPIKLLFPTADSARPYSMLGLGDI 811
            LGSFKTG ILLAGLF YDIFWVFFTPVMVSVAKSFDAPIKLLFPTADSARP+SMLGLGDI
Sbjct: 181  LGSFKTGAILLAGLFVYDIFWVFFTPVMVSVAKSFDAPIKLLFPTADSARPFSMLGLGDI 240

Query: 812  VIPGIFVALALRFDVSRGKDNRYFRSAFIGYTVGICLTIIVMNWFQAAQPALLYIVPSVI 991
            VIPGIFVALALRFDVSRGK N+YF+SAF+GYT G+ +TI+VMNWFQAAQPALLYIVP+VI
Sbjct: 241  VIPGIFVALALRFDVSRGKGNQYFKSAFLGYTTGLVVTIVVMNWFQAAQPALLYIVPAVI 300

Query: 992  GFLAVHCMWNGEVKPLLEFDESKTDEESKTD 1084
            GF+A HC+WNGEVKPLLEFDESKT   SK D
Sbjct: 301  GFMAAHCIWNGEVKPLLEFDESKTASSSKDD 331


>ref|XP_002313995.1| predicted protein [Populus trichocarpa] gi|118487274|gb|ABK95465.1|
            unknown [Populus trichocarpa] gi|222850403|gb|EEE87950.1|
            predicted protein [Populus trichocarpa]
          Length = 341

 Score =  534 bits (1375), Expect = e-149
 Identities = 264/338 (78%), Positives = 287/338 (84%), Gaps = 4/338 (1%)
 Frame = +2

Query: 92   MISSERVANLALAGLTLAXXXXXXXXXXXXXXTACLTVYVGCYRSVKPTPPTETMSNEHA 271
            M + ERVANLALAGLTLA              TACLTVYVGCYRSVKPTPP+ETMSNEHA
Sbjct: 1    MKNCERVANLALAGLTLAPLFVKVDPNLNVILTACLTVYVGCYRSVKPTPPSETMSNEHA 60

Query: 272  MRFPLIGSAMXXXXXXXXXXXXXDLVNAVLTCYFFVLGILALSATLLPAIRRFLPKTWND 451
            MRFP +GSAM             DLVNAVLTCYFFVLGI+ALSATLLPAI+R+LPK WND
Sbjct: 61   MRFPFVGSAMLLSLFLLFKFLSKDLVNAVLTCYFFVLGIVALSATLLPAIKRYLPKHWND 120

Query: 452  NIISWHLPYFRSVEIEFTISQCIAAIPGTFFCVWYAKQKHWLANNILGLAFCIQGIEMLS 631
            ++ISWH PYF S+EIEFT SQ +AAIPGTFFC WYA QKHWLANNILGLAFCIQGIEMLS
Sbjct: 121  DVISWHFPYFHSLEIEFTRSQIVAAIPGTFFCAWYASQKHWLANNILGLAFCIQGIEMLS 180

Query: 632  LGSFKTGGILLAGLFFYDIFWVFFTPVMVSVAKSFDAPIKLLFPTADSARPYSMLGLGDI 811
            LGSFKTG ILLAGLF YDIFWVFFTPVMVSVAKSFDAPIKLLFPTAD+ARP+SMLGLGDI
Sbjct: 181  LGSFKTGAILLAGLFVYDIFWVFFTPVMVSVAKSFDAPIKLLFPTADTARPFSMLGLGDI 240

Query: 812  VIPGIFVALALRFDVSRGKDNRYFRSAFIGYTVGICLTIIVMNWFQAAQPALLYIVPSVI 991
            VIPGIFVALALRFDVSRGK+++YF+SAF+GYT G+ LTIIVMNWFQAAQPALLYIVP+ I
Sbjct: 241  VIPGIFVALALRFDVSRGKESQYFKSAFLGYTAGVVLTIIVMNWFQAAQPALLYIVPAAI 300

Query: 992  GFLAVHCMWNGEVKPLLEFDESKT----DEESKTDESK 1093
            GFLA H +WNGEVKPL+EFDESKT     E+S+T  SK
Sbjct: 301  GFLAAHVVWNGEVKPLMEFDESKTAASSQEDSETSSSK 338


>ref|XP_002527044.1| Minor histocompatibility antigen H13, putative [Ricinus communis]
            gi|223533606|gb|EEF35344.1| Minor histocompatibility
            antigen H13, putative [Ricinus communis]
          Length = 341

 Score =  530 bits (1364), Expect = e-148
 Identities = 259/338 (76%), Positives = 287/338 (84%), Gaps = 4/338 (1%)
 Frame = +2

Query: 92   MISSERVANLALAGLTLAXXXXXXXXXXXXXXTACLTVYVGCYRSVKPTPPTETMSNEHA 271
            M + ER+AN+ALAGLTLA              TACL VYVGCYRSVKPTPP ETMSNEHA
Sbjct: 1    MKNGERLANIALAGLTLAPLVVKVDPNLNVILTACLAVYVGCYRSVKPTPPAETMSNEHA 60

Query: 272  MRFPLIGSAMXXXXXXXXXXXXXDLVNAVLTCYFFVLGILALSATLLPAIRRFLPKTWND 451
            MRFP +GSAM             DLVNAVLTCYFFVLGI+ALSATLLPAI+R+LPK WND
Sbjct: 61   MRFPFVGSAMLLSLFLLFKFLSKDLVNAVLTCYFFVLGIIALSATLLPAIKRYLPKHWND 120

Query: 452  NIISWHLPYFRSVEIEFTISQCIAAIPGTFFCVWYAKQKHWLANNILGLAFCIQGIEMLS 631
            ++I+WH PYFRS+EIEFT SQ +A+IPGTFFC WYA QKHWLANNILGLAFCIQGIEMLS
Sbjct: 121  DVITWHFPYFRSLEIEFTRSQVVASIPGTFFCAWYASQKHWLANNILGLAFCIQGIEMLS 180

Query: 632  LGSFKTGGILLAGLFFYDIFWVFFTPVMVSVAKSFDAPIKLLFPTADSARPYSMLGLGDI 811
            LGSFKTG ILLAGLF YDIFWVFFTPVMVSVAKSFDAPIKLLFPTAD+ARP+SMLGLGDI
Sbjct: 181  LGSFKTGAILLAGLFVYDIFWVFFTPVMVSVAKSFDAPIKLLFPTADAARPFSMLGLGDI 240

Query: 812  VIPGIFVALALRFDVSRGKDNRYFRSAFIGYTVGICLTIIVMNWFQAAQPALLYIVPSVI 991
            VIPGIFVALALRFDVSRGKD++YF+SAF+GYT G+ LTI+VMNWFQAAQPALLYIVP+VI
Sbjct: 241  VIPGIFVALALRFDVSRGKDSQYFKSAFLGYTAGVVLTIVVMNWFQAAQPALLYIVPAVI 300

Query: 992  GFLAVHCMWNGEVKPLLEFDESK----TDEESKTDESK 1093
            GFLA H +WNGEVKPL+EFDESK    T E S+++ +K
Sbjct: 301  GFLAAHVIWNGEVKPLMEFDESKTAASTQESSESNSAK 338


>ref|XP_002298474.1| predicted protein [Populus trichocarpa] gi|222845732|gb|EEE83279.1|
            predicted protein [Populus trichocarpa]
          Length = 341

 Score =  528 bits (1360), Expect = e-147
 Identities = 261/338 (77%), Positives = 285/338 (84%), Gaps = 4/338 (1%)
 Frame = +2

Query: 92   MISSERVANLALAGLTLAXXXXXXXXXXXXXXTACLTVYVGCYRSVKPTPPTETMSNEHA 271
            M + ER+AN ALAGLTLA              TACL VYVGCYRSVKPTPP+ETMSNEHA
Sbjct: 1    MKNCERIANFALAGLTLAPLFVKVDPNLNVILTACLAVYVGCYRSVKPTPPSETMSNEHA 60

Query: 272  MRFPLIGSAMXXXXXXXXXXXXXDLVNAVLTCYFFVLGILALSATLLPAIRRFLPKTWND 451
            MRFP +GSAM             DLVNAVLTCYFFVLGI+ALSATLLPAI+R+LPK WND
Sbjct: 61   MRFPFVGSAMLLSLFLLFKFLSKDLVNAVLTCYFFVLGIVALSATLLPAIKRYLPKHWND 120

Query: 452  NIISWHLPYFRSVEIEFTISQCIAAIPGTFFCVWYAKQKHWLANNILGLAFCIQGIEMLS 631
            ++ISW+ PYFRS++IEFT SQ +AAIPGTFFC WYA QKHWLANNILGLAFCIQGIEMLS
Sbjct: 121  DVISWNFPYFRSLDIEFTRSQIVAAIPGTFFCAWYASQKHWLANNILGLAFCIQGIEMLS 180

Query: 632  LGSFKTGGILLAGLFFYDIFWVFFTPVMVSVAKSFDAPIKLLFPTADSARPYSMLGLGDI 811
            LGSFKTG ILLAGLF YDIFWVFFTPVMVSVAKSFDAPIKLLFPTAD+ARP+SMLGLGDI
Sbjct: 181  LGSFKTGAILLAGLFVYDIFWVFFTPVMVSVAKSFDAPIKLLFPTADAARPFSMLGLGDI 240

Query: 812  VIPGIFVALALRFDVSRGKDNRYFRSAFIGYTVGICLTIIVMNWFQAAQPALLYIVPSVI 991
            VIPGIFVALALRFDVSRGKD++YF+SAF+GY  G+ LTIIVMNWFQAAQPALLYIVP+VI
Sbjct: 241  VIPGIFVALALRFDVSRGKDSQYFKSAFLGYAAGLVLTIIVMNWFQAAQPALLYIVPAVI 300

Query: 992  GFLAVHCMWNGEVKPLLEFDESKT----DEESKTDESK 1093
            GFLA H +WNGEVKPL+EFDESKT     E+S T  SK
Sbjct: 301  GFLAAHVLWNGEVKPLMEFDESKTAVSSQEDSGTSSSK 338


>ref|XP_003526473.1| PREDICTED: minor histocompatibility antigen H13-like [Glycine max]
          Length = 341

 Score =  524 bits (1350), Expect = e-146
 Identities = 261/336 (77%), Positives = 283/336 (84%), Gaps = 3/336 (0%)
 Frame = +2

Query: 92   MISSERVANLALAGLTLAXXXXXXXXXXXXXXTACLTVYVGCYRSVKPTPPTETMSNEHA 271
            M ++ER+ANLALAGLTLA              TACLTV+VGCYRSVKPTPPTETMSNEHA
Sbjct: 1    MKNTERIANLALAGLTLAPLVVKVDPNLNVILTACLTVFVGCYRSVKPTPPTETMSNEHA 60

Query: 272  MRFPLIGSAMXXXXXXXXXXXXXDLVNAVLTCYFFVLGILALSATLLPAIRRFLPKTWND 451
            MRFP +GSAM             DLVN VLT YFFVLGI+ALSATLLP I+RFLPK WND
Sbjct: 61   MRFPFVGSAMLLSLFLLFKFLSKDLVNTVLTGYFFVLGIVALSATLLPFIKRFLPKHWND 120

Query: 452  NIISWHLPYFRSVEIEFTISQCIAAIPGTFFCVWYAKQKHWLANNILGLAFCIQGIEMLS 631
            ++I WH PYFRS+EIEFT SQ +A IPGTFFC WYA +KHWLANNILGLAFCIQGIEMLS
Sbjct: 121  DVIVWHFPYFRSLEIEFTKSQVVAGIPGTFFCAWYALRKHWLANNILGLAFCIQGIEMLS 180

Query: 632  LGSFKTGGILLAGLFFYDIFWVFFTPVMVSVAKSFDAPIKLLFPTADSARPYSMLGLGDI 811
            LGSFKTG ILLAGLF YDIFWVFFTPVMVSVAKSFDAPIKLLFPTADSARP+SMLGLGDI
Sbjct: 181  LGSFKTGAILLAGLFVYDIFWVFFTPVMVSVAKSFDAPIKLLFPTADSARPFSMLGLGDI 240

Query: 812  VIPGIFVALALRFDVSRGKDNRYFRSAFIGYTVGICLTIIVMNWFQAAQPALLYIVPSVI 991
            VIPGIFVALALRFDVSRGK  +YF+SAF+GYTVG+ LTI+VMNWFQAAQPALLYIVPSVI
Sbjct: 241  VIPGIFVALALRFDVSRGKQPQYFKSAFVGYTVGLVLTIVVMNWFQAAQPALLYIVPSVI 300

Query: 992  GFLAVHCMWNGEVKPLLEFDESKT---DEESKTDES 1090
            GFLA HC+WNG+VK LLEFDESKT    +ES  D+S
Sbjct: 301  GFLAAHCLWNGDVKQLLEFDESKTANSPQESDDDKS 336


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