BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000955
         (1643 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269323.1| PREDICTED: tubby-like F-box protein 3-like [...   642   0.0  
gb|ADL36841.1| TLP domain class transcription factor [Malus x do...   597   e-168
ref|NP_850481.1| Tubby-like F-box protein 3 [Arabidopsis thalian...   595   e-168
ref|NP_001189775.1| Tubby-like F-box protein 3 [Arabidopsis thal...   595   e-167
ref|XP_002882136.1| hypothetical protein ARALYDRAFT_322431 [Arab...   590   e-166

>ref|XP_002269323.1| PREDICTED: tubby-like F-box protein 3-like [Vitis vinifera]
          Length = 405

 Score =  642 bits (1657), Expect = 0.0
 Identities = 318/413 (76%), Positives = 359/413 (86%), Gaps = 1/413 (0%)
 Frame = -2

Query: 1585 MSFKSMIQDMKGEIGNISRKGFEVKLSYGLKSKSHNNNNRLVQEDVFVPAEVLMMKQSCW 1406
            MSFKS+IQDM+GE G+ISRKGFEVK +YGL+S+SH    R+VQ+   V   V  ++QSCW
Sbjct: 1    MSFKSIIQDMRGEFGSISRKGFEVKFNYGLRSRSH----RVVQDSSMV---VDALRQSCW 53

Query: 1405 ANLPPELLREVLVRIEASESMWPPRKCVAACAGVCRSWREIMKEIVKVPELSGKLTFPIS 1226
            AN+PPELLR+VL+RIEASES WPPRK V ACAGVCRSWREI KEIVK PELSGKLTFPIS
Sbjct: 54   ANMPPELLRDVLMRIEASESTWPPRKNVVACAGVCRSWREITKEIVKTPELSGKLTFPIS 113

Query: 1225 LKQPGPRDSIIQCFIKRNRAAQTYHLYLGLTQGLTDNGKLLLAARKCRRTTCTDYIISLD 1046
            LKQPGPR S++QC+IKRNR+ QTYHLYLGL Q  TD+GK LLAARKCRR TCTDYIISL+
Sbjct: 114  LKQPGPRGSLLQCYIKRNRSNQTYHLYLGLNQASTDDGKFLLAARKCRRPTCTDYIISLN 173

Query: 1045 TDDMSKGSMTYIGKLRSNFLGTKFVIYDSQPPHAGATVAKSRSRRLVGLKQVSPRVPAGN 866
             DD+SKGS TYIGKLRSNFLGTKF +YD+QPP+AGA ++KSRS R +G +QVSPRVPAGN
Sbjct: 174  ADDVSKGSTTYIGKLRSNFLGTKFTVYDAQPPNAGARISKSRSTRRLGSRQVSPRVPAGN 233

Query: 865  YPVAQITYELNVLGSRGPRRMQCTMNAIPASAIEAEGTAPTQTEFLPNNLDSLPSIPFFR 686
            YPVA I+YELNVLGSRGPRRMQC M+AIPA+AIE  G APTQTEF+ +N+DS PS PFFR
Sbjct: 234  YPVAHISYELNVLGSRGPRRMQCVMDAIPANAIEPGGVAPTQTEFVLSNVDSFPSFPFFR 293

Query: 685  SKSTRVENLPSGPVAGHKG-ALVLKNKSPRWHEQLQCWCLNFRGRVTVASVKNFQLVATP 509
            SKS R E+L SGP++G K   LVLKNK+PRWHEQLQCWCLNF GRVTVASVKNFQLVA+ 
Sbjct: 294  SKSNRTESLHSGPLSGPKDEMLVLKNKAPRWHEQLQCWCLNFNGRVTVASVKNFQLVASA 353

Query: 508  ENGAQIGQEHEKVILQFGKIGKDLFTMDFQYPISAFQAFAICLSSFDTKIACE 350
            ENG   GQEHE VILQFGK+GKD+FTMD+QYPISAFQAFAICLSSFDTKIACE
Sbjct: 354  ENGV-AGQEHENVILQFGKVGKDVFTMDYQYPISAFQAFAICLSSFDTKIACE 405


>gb|ADL36841.1| TLP domain class transcription factor [Malus x domestica]
          Length = 401

 Score =  597 bits (1539), Expect = e-168
 Identities = 295/413 (71%), Positives = 351/413 (84%), Gaps = 1/413 (0%)
 Frame = -2

Query: 1585 MSFKSMIQDMKGEIGNISRKGFEVKLSYGLKSKSHNNNNRLVQEDVFVPAEVLMMKQSCW 1406
            MSFKSMIQDMKGE+G+ISRK F+VK  +G++S+S     R+VQ+  F    V  +KQSCW
Sbjct: 1    MSFKSMIQDMKGELGSISRKSFDVK--FGMRSRSQ----RVVQDTSF---RVDALKQSCW 51

Query: 1405 ANLPPELLREVLVRIEASESMWPPRKCVAACAGVCRSWREIMKEIVKVPELSGKLTFPIS 1226
            AN+PPELLR+VL+RIEAS+  WPPRK V  CAGVCR+WREIMKEIVK PE+SGKLTFPIS
Sbjct: 52   ANMPPELLRDVLMRIEASDDTWPPRKNVVCCAGVCRNWREIMKEIVKSPEVSGKLTFPIS 111

Query: 1225 LKQPGPRDSIIQCFIKRNRAAQTYHLYLGLTQGLTDNGKLLLAARKCRRTTCTDYIISLD 1046
            LKQPGPR+S++QC+IKR+R+ QTY+L+LGL+Q  TD+GK LLAA+KCRR TCTDYIISL+
Sbjct: 112  LKQPGPRNSLLQCYIKRSRSNQTYYLFLGLSQASTDDGKFLLAAKKCRRPTCTDYIISLN 171

Query: 1045 TDDMSKGSMTYIGKLRSNFLGTKFVIYDSQPPHAGATVAKSRSRRLVGLKQVSPRVPAGN 866
             + +SKG+  ++GKLRSNFLGTKF IYD+QP ++GA V K RS RLV   +VSPRVPAGN
Sbjct: 172  AEVVSKGNSAFVGKLRSNFLGTKFTIYDAQPTNSGAKVTKCRSTRLV--NKVSPRVPAGN 229

Query: 865  YPVAQITYELNVLGSRGPRRMQCTMNAIPASAIEAEGTAPTQTEFLPNNLDSLPSIPFFR 686
            YPVA I YELNV+G+RGPRRMQC M++IPA A+E  G APTQTEF+ +N DS PS+PFFR
Sbjct: 230  YPVAHIAYELNVMGARGPRRMQCVMDSIPARAVEPGGVAPTQTEFMHSNTDSFPSVPFFR 289

Query: 685  SKSTRVENLPSGPVAG-HKGALVLKNKSPRWHEQLQCWCLNFRGRVTVASVKNFQLVATP 509
            SKSTR EN PS   +G ++G LVL+NK+PRWHEQLQCWCLNF GRVTVASVKNFQLV++P
Sbjct: 290  SKSTRTENFPSPLESGENEGMLVLRNKAPRWHEQLQCWCLNFNGRVTVASVKNFQLVSSP 349

Query: 508  ENGAQIGQEHEKVILQFGKIGKDLFTMDFQYPISAFQAFAICLSSFDTKIACE 350
            ENG   GQEHE VILQFGK+GKD+FTMD++YPISAFQAFAICLSSFDTKIACE
Sbjct: 350  ENGV-AGQEHENVILQFGKVGKDVFTMDYRYPISAFQAFAICLSSFDTKIACE 401


>ref|NP_850481.1| Tubby-like F-box protein 3 [Arabidopsis thaliana]
            gi|79324947|ref|NP_001031558.1| Tubby-like F-box protein
            3 [Arabidopsis thaliana]
            gi|75248467|sp|Q8VY21.1|TLP3_ARATH RecName:
            Full=Tubby-like F-box protein 3; Short=AtTLP3
            gi|18377640|gb|AAL66970.1| putative tubby protein
            [Arabidopsis thaliana] gi|20465543|gb|AAM20254.1|
            putative tubby protein [Arabidopsis thaliana]
            gi|27372514|gb|AAK98802.1| tubby-like protein 3
            [Arabidopsis thaliana] gi|330255813|gb|AEC10907.1|
            Tubby-like F-box protein 3 [Arabidopsis thaliana]
            gi|330255814|gb|AEC10908.1| Tubby-like F-box protein 3
            [Arabidopsis thaliana]
          Length = 406

 Score =  595 bits (1535), Expect = e-168
 Identities = 296/415 (71%), Positives = 345/415 (83%), Gaps = 3/415 (0%)
 Frame = -2

Query: 1585 MSFKSMIQDMKGEIGNISRKGFEVKLSYGLKSKSHNNNNRLVQEDVFVPAEVLMMKQSCW 1406
            MSFKS+IQDM+GE+G+ISRKGF+V+  YG      + + R+VQ D  VP +    KQSCW
Sbjct: 1    MSFKSLIQDMRGELGSISRKGFDVRFGYG-----RSRSQRVVQ-DTSVPVDAF--KQSCW 52

Query: 1405 ANLPPELLREVLVRIEASESMWPPRKCVAACAGVCRSWREIMKEIVKVPELSGKLTFPIS 1226
            A++PPELLR+VL+RIE SE  WP RK V +CAGVCR+WREI+KEIV+VPELS KLTFPIS
Sbjct: 53   ASMPPELLRDVLMRIEQSEDTWPSRKNVVSCAGVCRNWREIVKEIVRVPELSSKLTFPIS 112

Query: 1225 LKQPGPRDSIIQCFIKRNRAAQTYHLYLGLTQGLT-DNGKLLLAARKCRRTTCTDYIISL 1049
            LKQPGPR S++QC+I RNR+ QTY+LYLGL Q  + D+GK LLAA++ RR TCTDYIISL
Sbjct: 113  LKQPGPRGSLVQCYIMRNRSNQTYYLYLGLNQAASNDDGKFLLAAKRFRRPTCTDYIISL 172

Query: 1048 DTDDMSKGSMTYIGKLRSNFLGTKFVIYDSQPPHAGATVAKSRSRRLVGLKQVSPRVPAG 869
            + DD+S+GS TYIGKLRSNFLGTKF +YD+QP + G  V ++RS RL+ LKQVSPR+P+G
Sbjct: 173  NCDDVSRGSNTYIGKLRSNFLGTKFTVYDAQPTNPGTQVTRTRSSRLLSLKQVSPRIPSG 232

Query: 868  NYPVAQITYELNVLGSRGPRRMQCTMNAIPASAIEAEGTAPTQTEFLPNNLDSLPSIPFF 689
            NYPVA I+YELNVLGSRGPRRMQC M+AIPASA+E  GTAPTQTE + +NLDS PS  FF
Sbjct: 233  NYPVAHISYELNVLGSRGPRRMQCVMDAIPASAVEPGGTAPTQTELVHSNLDSFPSFSFF 292

Query: 688  RSKSTRVENLPSGP--VAGHKGALVLKNKSPRWHEQLQCWCLNFRGRVTVASVKNFQLVA 515
            RSKS R E+LPSGP   A  +G LVLKNK+PRWHEQLQCWCLNF GRVTVASVKNFQLVA
Sbjct: 293  RSKSIRAESLPSGPSSAAQKEGLLVLKNKAPRWHEQLQCWCLNFNGRVTVASVKNFQLVA 352

Query: 514  TPENGAQIGQEHEKVILQFGKIGKDLFTMDFQYPISAFQAFAICLSSFDTKIACE 350
             PENG   G EHE VILQFGK+GKD+FTMD+QYPISAFQAF ICLSSFDTKIACE
Sbjct: 353  APENG-PAGPEHENVILQFGKVGKDVFTMDYQYPISAFQAFTICLSSFDTKIACE 406


>ref|NP_001189775.1| Tubby-like F-box protein 3 [Arabidopsis thaliana]
            gi|3738302|gb|AAC63644.1| putative tubby protein
            [Arabidopsis thaliana] gi|20197552|gb|AAM15124.1|
            putative tubby protein [Arabidopsis thaliana]
            gi|227204449|dbj|BAH57076.1| AT2G47900 [Arabidopsis
            thaliana] gi|330255815|gb|AEC10909.1| Tubby-like F-box
            protein 3 [Arabidopsis thaliana]
          Length = 407

 Score =  595 bits (1533), Expect = e-167
 Identities = 296/416 (71%), Positives = 344/416 (82%), Gaps = 4/416 (0%)
 Frame = -2

Query: 1585 MSFKSMIQDMKGEIGNISRKGFEVKLSYGLKSKSHNNNNRLVQEDVFVPAEVLMMKQSCW 1406
            MSFKS+IQDM+GE+G+ISRKGF+V+  YG      + + R+VQ D  VP +    KQSCW
Sbjct: 1    MSFKSLIQDMRGELGSISRKGFDVRFGYG-----RSRSQRVVQ-DTSVPVDAF--KQSCW 52

Query: 1405 ANLPPELLREVLVRIEASESMWPPRKCVAACAGVCRSWREIMKEIVKVPELSGKLTFPIS 1226
            A++PPELLR+VL+RIE SE  WP RK V +CAGVCR+WREI+KEIV+VPELS KLTFPIS
Sbjct: 53   ASMPPELLRDVLMRIEQSEDTWPSRKNVVSCAGVCRNWREIVKEIVRVPELSSKLTFPIS 112

Query: 1225 LKQPGPRDSIIQCFIKRNRAAQTYHLYLGLTQGLT--DNGKLLLAARKCRRTTCTDYIIS 1052
            LKQPGPR S++QC+I RNR+ QTY+LYLGL Q     D+GK LLAA++ RR TCTDYIIS
Sbjct: 113  LKQPGPRGSLVQCYIMRNRSNQTYYLYLGLNQAAASNDDGKFLLAAKRFRRPTCTDYIIS 172

Query: 1051 LDTDDMSKGSMTYIGKLRSNFLGTKFVIYDSQPPHAGATVAKSRSRRLVGLKQVSPRVPA 872
            L+ DD+S+GS TYIGKLRSNFLGTKF +YD+QP + G  V ++RS RL+ LKQVSPR+P+
Sbjct: 173  LNCDDVSRGSNTYIGKLRSNFLGTKFTVYDAQPTNPGTQVTRTRSSRLLSLKQVSPRIPS 232

Query: 871  GNYPVAQITYELNVLGSRGPRRMQCTMNAIPASAIEAEGTAPTQTEFLPNNLDSLPSIPF 692
            GNYPVA I+YELNVLGSRGPRRMQC M+AIPASA+E  GTAPTQTE + +NLDS PS  F
Sbjct: 233  GNYPVAHISYELNVLGSRGPRRMQCVMDAIPASAVEPGGTAPTQTELVHSNLDSFPSFSF 292

Query: 691  FRSKSTRVENLPSGP--VAGHKGALVLKNKSPRWHEQLQCWCLNFRGRVTVASVKNFQLV 518
            FRSKS R E+LPSGP   A  +G LVLKNK+PRWHEQLQCWCLNF GRVTVASVKNFQLV
Sbjct: 293  FRSKSIRAESLPSGPSSAAQKEGLLVLKNKAPRWHEQLQCWCLNFNGRVTVASVKNFQLV 352

Query: 517  ATPENGAQIGQEHEKVILQFGKIGKDLFTMDFQYPISAFQAFAICLSSFDTKIACE 350
            A PENG   G EHE VILQFGK+GKD+FTMD+QYPISAFQAF ICLSSFDTKIACE
Sbjct: 353  AAPENG-PAGPEHENVILQFGKVGKDVFTMDYQYPISAFQAFTICLSSFDTKIACE 407


>ref|XP_002882136.1| hypothetical protein ARALYDRAFT_322431 [Arabidopsis lyrata subsp.
            lyrata] gi|297327975|gb|EFH58395.1| hypothetical protein
            ARALYDRAFT_322431 [Arabidopsis lyrata subsp. lyrata]
          Length = 407

 Score =  590 bits (1520), Expect = e-166
 Identities = 293/416 (70%), Positives = 343/416 (82%), Gaps = 4/416 (0%)
 Frame = -2

Query: 1585 MSFKSMIQDMKGEIGNISRKGFEVKLSYGLKSKSHNNNNRLVQEDVFVPAEVLMMKQSCW 1406
            MSFKS+IQDM+GE+G+ISRKGF+V+  YG      + + R+VQ D  VP +    KQSCW
Sbjct: 1    MSFKSLIQDMRGELGSISRKGFDVRFGYG-----RSRSQRVVQ-DTSVPVDAF--KQSCW 52

Query: 1405 ANLPPELLREVLVRIEASESMWPPRKCVAACAGVCRSWREIMKEIVKVPELSGKLTFPIS 1226
            AN+PPELLR+VL+RIE SE  WP RK V +CAGVCR+WREI+KEIVKVPE+S KLTFPIS
Sbjct: 53   ANMPPELLRDVLMRIELSEDTWPSRKNVVSCAGVCRNWREIVKEIVKVPEVSSKLTFPIS 112

Query: 1225 LKQPGPRDSIIQCFIKRNRAAQTYHLYLGLTQGLT--DNGKLLLAARKCRRTTCTDYIIS 1052
            LKQPGPR S++QC+I RNR+ QTY+LYLGL Q     D+GK LLAA++ RR TCTDYIIS
Sbjct: 113  LKQPGPRGSLVQCYIMRNRSNQTYYLYLGLNQAAASNDDGKFLLAAKRFRRPTCTDYIIS 172

Query: 1051 LDTDDMSKGSMTYIGKLRSNFLGTKFVIYDSQPPHAGATVAKSRSRRLVGLKQVSPRVPA 872
            L+ DD+S+GS TYIGKLRSNFLGTKF ++D+QP + G  V ++RS RL+ LKQVSPR+P+
Sbjct: 173  LNCDDVSRGSNTYIGKLRSNFLGTKFTVFDAQPTNPGTQVTRTRSSRLLSLKQVSPRIPS 232

Query: 871  GNYPVAQITYELNVLGSRGPRRMQCTMNAIPASAIEAEGTAPTQTEFLPNNLDSLPSIPF 692
            GNYPVA I+YELNVLGSRGPRRMQC M+AIPASA+E  GTAPTQTE + +NL++ PS  F
Sbjct: 233  GNYPVAHISYELNVLGSRGPRRMQCVMDAIPASAVEPGGTAPTQTELIHSNLENFPSFSF 292

Query: 691  FRSKSTRVENLPSGP--VAGHKGALVLKNKSPRWHEQLQCWCLNFRGRVTVASVKNFQLV 518
            FRSKS R E+L SGP   A  +G LVLKNK+PRWHEQLQCWCLNF GRVTVASVKNFQLV
Sbjct: 293  FRSKSIRAESLSSGPASAAQKEGLLVLKNKAPRWHEQLQCWCLNFNGRVTVASVKNFQLV 352

Query: 517  ATPENGAQIGQEHEKVILQFGKIGKDLFTMDFQYPISAFQAFAICLSSFDTKIACE 350
            A PENG   G EHE VILQFGK+GKD+FTMD+QYPISAFQAF ICLSSFDTKIACE
Sbjct: 353  AAPENG-PAGPEHENVILQFGKVGKDVFTMDYQYPISAFQAFTICLSSFDTKIACE 407