BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000699
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...    58   9e-07

>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 32/80 (40%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
 Frame = +3

Query: 18  VFIGSNTSFSLPAGNYSGCKPGCIYFTGGTRDMTQMSGRFVDQDMGIFNVETEKFESF-C 194
           +FIG N+S SL A ++SGC   CIY+T    D     G F D D+GIF +  E  E   C
Sbjct: 318 LFIGENSSLSLSATDFSGCMGNCIYYTDDYLD-ANYDGHFGDHDLGIFKLCDETIEPLPC 376

Query: 195 DGNDIVS--EFSPHVWIRPN 248
              +  S  ++SP +W+ PN
Sbjct: 377 YPRNFTSPLQWSPPLWVSPN 396