BLASTX nr result

ID: Coptis21_contig00000511 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000511
         (1754 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280211.2| PREDICTED: nucleosome assembly protein 1-lik...   360   4e-98
gb|AFW85856.1| hypothetical protein ZEAMMB73_970342 [Zea mays]        339   1e-90
ref|NP_001105215.1| nucleosome/chromatin assembly factor group A...   339   1e-90
ref|XP_002436481.1| hypothetical protein SORBIDRAFT_10g003450 [S...   338   4e-90
ref|XP_002281573.1| PREDICTED: nucleosome assembly protein 1-lik...   334   4e-90

>ref|XP_002280211.2| PREDICTED: nucleosome assembly protein 1-like 1-like isoform 1 [Vitis
            vinifera] gi|297743095|emb|CBI35962.3| unnamed protein
            product [Vitis vinifera]
          Length = 381

 Score =  360 bits (925), Expect(2) = 4e-98
 Identities = 184/240 (76%), Positives = 194/240 (80%)
 Frame = -3

Query: 1425 AALSAEDRAGLVNALKDKLQSLAGQHPDVLETLSPTVRKRVEVLREIQSQHDELEAKFFE 1246
            AALSAEDRAGLVNALK+KLQ+LAGQH DVLETLSP VRKRVE LREIQ QHDELEAKFFE
Sbjct: 22   AALSAEDRAGLVNALKNKLQNLAGQHSDVLETLSPNVRKRVEFLREIQGQHDELEAKFFE 81

Query: 1245 ERAALEAKYQKLYEPLYSKRYDIXXXXXXXXXXXXEAPIDQEEGKGTEVKGVPDFWLNAM 1066
            ERAALEAKYQKLYEPLY+KRY+I            EAP+DQEE K TE KGVP+FWL AM
Sbjct: 82   ERAALEAKYQKLYEPLYTKRYEIVNGVVEVEGVTNEAPMDQEEDKATEEKGVPNFWLTAM 141

Query: 1065 KTNEVLTEEISERDEEALKFLKDIKWRRIENPKGFMLEFFFDANPYFKNSVLTKTYHMID 886
            KTNEVL EEISERDE ALK+LKDIKW RI+NPKGF LEF+FDANPYFKNS+LTKTYHMID
Sbjct: 142  KTNEVLAEEISERDEGALKYLKDIKWYRIDNPKGFKLEFYFDANPYFKNSILTKTYHMID 201

Query: 885  DDEPILEKAIGTEIEWLPXXXXXXXXXXXXXXXXXXXXXPITKTENCESFFNFFNPPQVP 706
            DDEPILEKAIGTEIEW P                     PITKTENCESFFNFFNPPQVP
Sbjct: 202  DDEPILEKAIGTEIEWYPGKSLTQKLLKKKPRKGSKNAKPITKTENCESFFNFFNPPQVP 261



 Score = 26.2 bits (56), Expect(2) = 4e-98
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -1

Query: 1535 NKDNFNMADLTESLPGATA 1479
            +KD FN+ADL  +LP A A
Sbjct: 4    DKDQFNIADLGAALPAAAA 22



 Score = 64.3 bits (155), Expect = 1e-07
 Identities = 38/86 (44%), Positives = 41/86 (47%)
 Frame = -1

Query: 566 AVSWFTGEAVQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESKSRKKPS 387
           AVSWFTGEAVQG                                         KSRKK S
Sbjct: 297 AVSWFTGEAVQGDEFEDIEDDDDEDGDDEDEEDEEDEDEEEDDEDEDEEEE-DKSRKKTS 355

Query: 386 AGPKKTGRAQIGEGQQGERPPECKQQ 309
            GPKK+GR++ GEGQ GERPPECKQQ
Sbjct: 356 TGPKKSGRSRAGEGQLGERPPECKQQ 381


>gb|AFW85856.1| hypothetical protein ZEAMMB73_970342 [Zea mays]
          Length = 369

 Score =  339 bits (870), Expect = 1e-90
 Identities = 176/241 (73%), Positives = 189/241 (78%), Gaps = 1/241 (0%)
 Frame = -3

Query: 1425 AALSAEDRAGLVNALKDKLQSLAGQHPDVLETLSPTVRKRVEVLREIQSQHDELEAKFFE 1246
            AALSAEDRAGLVNALKDKLQSLAGQH DVLETLSP VRKRVE LREIQSQHDE+EAKFFE
Sbjct: 22   AALSAEDRAGLVNALKDKLQSLAGQHADVLETLSPNVRKRVEFLREIQSQHDEIEAKFFE 81

Query: 1245 ERAALEAKYQKLYEPLYSKRYDIXXXXXXXXXXXXE-APIDQEEGKGTEVKGVPDFWLNA 1069
            ERAALEAKYQKLYEPLY+KRY I            E A  +  EGK  + KGVPDFWL A
Sbjct: 82   ERAALEAKYQKLYEPLYTKRYGIVNGEVEVDGVCDEPASENTVEGKEPDAKGVPDFWLTA 141

Query: 1068 MKTNEVLTEEISERDEEALKFLKDIKWRRIENPKGFMLEFFFDANPYFKNSVLTKTYHMI 889
            MKTNEVL+EEI ERDE ALK+LKDIKW RIE+PKGF L+FFFD NP+FKNSVLTKTYHM+
Sbjct: 142  MKTNEVLSEEIQERDEAALKYLKDIKWSRIEDPKGFKLDFFFDTNPFFKNSVLTKTYHMV 201

Query: 888  DDDEPILEKAIGTEIEWLPXXXXXXXXXXXXXXXXXXXXXPITKTENCESFFNFFNPPQV 709
            D+D+PILEKAIGTEIEW P                     PITKTE+CESFFNFFNPPQV
Sbjct: 202  DEDDPILEKAIGTEIEWYPGKNLTQKILKKKPKKGSKNTKPITKTEDCESFFNFFNPPQV 261

Query: 708  P 706
            P
Sbjct: 262  P 262


>ref|NP_001105215.1| nucleosome/chromatin assembly factor group A [Zea mays]
            gi|29569109|gb|AAO84021.1| nucleosome/chromatin assembly
            factor group A [Zea mays] gi|413953208|gb|AFW85857.1|
            nucleosome/chromatin assembly factor group A [Zea mays]
          Length = 380

 Score =  339 bits (870), Expect = 1e-90
 Identities = 176/241 (73%), Positives = 189/241 (78%), Gaps = 1/241 (0%)
 Frame = -3

Query: 1425 AALSAEDRAGLVNALKDKLQSLAGQHPDVLETLSPTVRKRVEVLREIQSQHDELEAKFFE 1246
            AALSAEDRAGLVNALKDKLQSLAGQH DVLETLSP VRKRVE LREIQSQHDE+EAKFFE
Sbjct: 22   AALSAEDRAGLVNALKDKLQSLAGQHADVLETLSPNVRKRVEFLREIQSQHDEIEAKFFE 81

Query: 1245 ERAALEAKYQKLYEPLYSKRYDIXXXXXXXXXXXXE-APIDQEEGKGTEVKGVPDFWLNA 1069
            ERAALEAKYQKLYEPLY+KRY I            E A  +  EGK  + KGVPDFWL A
Sbjct: 82   ERAALEAKYQKLYEPLYTKRYGIVNGEVEVDGVCDEPASENTVEGKEPDAKGVPDFWLTA 141

Query: 1068 MKTNEVLTEEISERDEEALKFLKDIKWRRIENPKGFMLEFFFDANPYFKNSVLTKTYHMI 889
            MKTNEVL+EEI ERDE ALK+LKDIKW RIE+PKGF L+FFFD NP+FKNSVLTKTYHM+
Sbjct: 142  MKTNEVLSEEIQERDEAALKYLKDIKWSRIEDPKGFKLDFFFDTNPFFKNSVLTKTYHMV 201

Query: 888  DDDEPILEKAIGTEIEWLPXXXXXXXXXXXXXXXXXXXXXPITKTENCESFFNFFNPPQV 709
            D+D+PILEKAIGTEIEW P                     PITKTE+CESFFNFFNPPQV
Sbjct: 202  DEDDPILEKAIGTEIEWYPGKNLTQKILKKKPKKGSKNTKPITKTEDCESFFNFFNPPQV 261

Query: 708  P 706
            P
Sbjct: 262  P 262


>ref|XP_002436481.1| hypothetical protein SORBIDRAFT_10g003450 [Sorghum bicolor]
            gi|241914704|gb|EER87848.1| hypothetical protein
            SORBIDRAFT_10g003450 [Sorghum bicolor]
          Length = 381

 Score =  338 bits (866), Expect = 4e-90
 Identities = 173/241 (71%), Positives = 189/241 (78%), Gaps = 1/241 (0%)
 Frame = -3

Query: 1425 AALSAEDRAGLVNALKDKLQSLAGQHPDVLETLSPTVRKRVEVLREIQSQHDELEAKFFE 1246
            AALSAEDRAGLVNALKDKLQSLAGQH DVLE+LSP VRKRVE LREIQSQHDE+EAKFFE
Sbjct: 22   AALSAEDRAGLVNALKDKLQSLAGQHADVLESLSPNVRKRVEFLREIQSQHDEIEAKFFE 81

Query: 1245 ERAALEAKYQKLYEPLYSKRYDIXXXXXXXXXXXXEAPIDQE-EGKGTEVKGVPDFWLNA 1069
            ERAALEAKYQKLYEPLY+KRYDI            E   +   EGK  + KGVPDFWL A
Sbjct: 82   ERAALEAKYQKLYEPLYTKRYDIVNGVVEVDGVSDEPTSENAAEGKEPDAKGVPDFWLTA 141

Query: 1068 MKTNEVLTEEISERDEEALKFLKDIKWRRIENPKGFMLEFFFDANPYFKNSVLTKTYHMI 889
            +KTNEVL+EEI ERDE ALK+LKDIKW RIE+PKGF LEFFFD NP+FKNSVLTKTYHM+
Sbjct: 142  LKTNEVLSEEIQERDEPALKYLKDIKWSRIEDPKGFKLEFFFDTNPFFKNSVLTKTYHMV 201

Query: 888  DDDEPILEKAIGTEIEWLPXXXXXXXXXXXXXXXXXXXXXPITKTENCESFFNFFNPPQV 709
            D+D+PILEKAIGT+I+W P                     PITKTE+CESFFNFFNPPQV
Sbjct: 202  DEDDPILEKAIGTDIDWYPGKNLTQKILKKKPKKGSKNTKPITKTEDCESFFNFFNPPQV 261

Query: 708  P 706
            P
Sbjct: 262  P 262


>ref|XP_002281573.1| PREDICTED: nucleosome assembly protein 1-like 1-like [Vitis vinifera]
          Length = 368

 Score =  334 bits (857), Expect(2) = 4e-90
 Identities = 173/239 (72%), Positives = 186/239 (77%)
 Frame = -3

Query: 1422 ALSAEDRAGLVNALKDKLQSLAGQHPDVLETLSPTVRKRVEVLREIQSQHDELEAKFFEE 1243
            AL+AEDRA LVNALK+KLQ+LAGQH DVLE L+P VRKRVE LREIQ QHDELEAKFFEE
Sbjct: 19   ALNAEDRADLVNALKNKLQNLAGQHSDVLENLTPKVRKRVETLREIQGQHDELEAKFFEE 78

Query: 1242 RAALEAKYQKLYEPLYSKRYDIXXXXXXXXXXXXEAPIDQEEGKGTEVKGVPDFWLNAMK 1063
            RAALEAKYQKLY+PLYSKRYDI            E  +DQE+    E KGVPDFWL AMK
Sbjct: 79   RAALEAKYQKLYQPLYSKRYDIVNGVVEVDGVTNEVTMDQEDK--AEEKGVPDFWLTAMK 136

Query: 1062 TNEVLTEEISERDEEALKFLKDIKWRRIENPKGFMLEFFFDANPYFKNSVLTKTYHMIDD 883
            TNEVL EEISERDE ALK++KDIKW RI+NPKGF LEFFFD NPYFKNSVLTKTYHMID+
Sbjct: 137  TNEVLAEEISERDEGALKYIKDIKWCRIDNPKGFKLEFFFDTNPYFKNSVLTKTYHMIDE 196

Query: 882  DEPILEKAIGTEIEWLPXXXXXXXXXXXXXXXXXXXXXPITKTENCESFFNFFNPPQVP 706
            DEPILEKAIGTEIEW P                     PITKTE+CESFFNFF+PPQVP
Sbjct: 197  DEPILEKAIGTEIEWFPGKCLTQKLLKKKPRKGSKNAKPITKTESCESFFNFFSPPQVP 255



 Score = 25.8 bits (55), Expect(2) = 4e-90
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -1

Query: 1535 NKDNFNMADLTESLPGATA 1479
            +K+ FNMADL  SLP   A
Sbjct: 4    SKETFNMADLGSSLPALNA 22


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