BLASTX nr result

ID: Coptis21_contig00000498 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000498
         (1249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634361.1| PREDICTED: uncharacterized protein LOC100854...   252   2e-64
emb|CBI18930.3| unnamed protein product [Vitis vinifera]              252   2e-64
ref|XP_002307747.1| predicted protein [Populus trichocarpa] gi|2...   241   4e-61
ref|NP_001235579.1| uncharacterized protein LOC100500267 precurs...   231   2e-58
ref|XP_002510591.1| conserved hypothetical protein [Ricinus comm...   230   5e-58

>ref|XP_003634361.1| PREDICTED: uncharacterized protein LOC100854733 [Vitis vinifera]
          Length = 234

 Score =  252 bits (643), Expect = 2e-64
 Identities = 123/188 (65%), Positives = 143/188 (76%)
 Frame = -3

Query: 566 SLSIPAKFDGFVYNKNHRRMEDLIIIEAFFDPVCPDSRDAWPPLKQILQHYGSRISLIVH 387
           ++SIPAKFDGFVYN     + D IIIEAFFDPVCPDSRDAWPPLK+ + +Y  R+SLIVH
Sbjct: 30  AVSIPAKFDGFVYNYTGTGI-DSIIIEAFFDPVCPDSRDAWPPLKRAIAYYAPRVSLIVH 88

Query: 386 PFPLPYHENAFVSSRALHIVDKLNASATYNMLEMFFKHQGKFYNQPTHKMSRKAVVDSVV 207
           PF LPYH+NAF +SRALHIV+KLN+SATY++LEM FKHQ  FYNQ T  MSR A+VD +V
Sbjct: 89  PFALPYHDNAFATSRALHIVNKLNSSATYHLLEMLFKHQEIFYNQITVNMSRTAIVDCIV 148

Query: 206 KLXXXXXXXXXXXXXXXSFDDRETDLRTRVSFKYGCSRGVSGTPFFFVNGFLLPDAGSPL 27
           K                 F DR+TDL TRVSFKYGCSRGV GTP+FFVNGF LPD GS +
Sbjct: 149 KFVSKAVGESLFSAIKSGFSDRQTDLTTRVSFKYGCSRGVLGTPYFFVNGFPLPDPGSAI 208

Query: 26  DYNNWRSI 3
           +Y+ WRSI
Sbjct: 209 NYSKWRSI 216


>emb|CBI18930.3| unnamed protein product [Vitis vinifera]
          Length = 514

 Score =  252 bits (643), Expect = 2e-64
 Identities = 123/188 (65%), Positives = 143/188 (76%)
 Frame = -3

Query: 566 SLSIPAKFDGFVYNKNHRRMEDLIIIEAFFDPVCPDSRDAWPPLKQILQHYGSRISLIVH 387
           ++SIPAKFDGFVYN     + D IIIEAFFDPVCPDSRDAWPPLK+ + +Y  R+SLIVH
Sbjct: 30  AVSIPAKFDGFVYNYTGTGI-DSIIIEAFFDPVCPDSRDAWPPLKRAIAYYAPRVSLIVH 88

Query: 386 PFPLPYHENAFVSSRALHIVDKLNASATYNMLEMFFKHQGKFYNQPTHKMSRKAVVDSVV 207
           PF LPYH+NAF +SRALHIV+KLN+SATY++LEM FKHQ  FYNQ T  MSR A+VD +V
Sbjct: 89  PFALPYHDNAFATSRALHIVNKLNSSATYHLLEMLFKHQEIFYNQITVNMSRTAIVDCIV 148

Query: 206 KLXXXXXXXXXXXXXXXSFDDRETDLRTRVSFKYGCSRGVSGTPFFFVNGFLLPDAGSPL 27
           K                 F DR+TDL TRVSFKYGCSRGV GTP+FFVNGF LPD GS +
Sbjct: 149 KFVSKAVGESLFSAIKSGFSDRQTDLTTRVSFKYGCSRGVLGTPYFFVNGFPLPDPGSAI 208

Query: 26  DYNNWRSI 3
           +Y+ WRSI
Sbjct: 209 NYSKWRSI 216


>ref|XP_002307747.1| predicted protein [Populus trichocarpa] gi|222857196|gb|EEE94743.1|
           predicted protein [Populus trichocarpa]
          Length = 212

 Score =  241 bits (614), Expect = 4e-61
 Identities = 113/184 (61%), Positives = 140/184 (76%)
 Frame = -3

Query: 554 PAKFDGFVYNKNHRRMEDLIIIEAFFDPVCPDSRDAWPPLKQILQHYGSRISLIVHPFPL 375
           PA++DGFVY +N +   + I++EAFFDPVCPDSRD+WPPLK+ L+HYGSR+ L+VH  PL
Sbjct: 11  PARYDGFVY-ENRQGDLNSILVEAFFDPVCPDSRDSWPPLKEALKHYGSRVWLVVHLLPL 69

Query: 374 PYHENAFVSSRALHIVDKLNASATYNMLEMFFKHQGKFYNQPTHKMSRKAVVDSVVKLXX 195
           PYH+NAFVS RALHI + LN+S T+ +LE FFKHQ KFYN  T  +S+ ++V+ +VK   
Sbjct: 70  PYHDNAFVSCRALHIANTLNSSFTFPLLEEFFKHQEKFYNAKTSNLSKTSIVEEIVKFAT 129

Query: 194 XXXXXXXXXXXXXSFDDRETDLRTRVSFKYGCSRGVSGTPFFFVNGFLLPDAGSPLDYNN 15
                         F+DR+TDL+TRVSFKY  SRGV GTPFFFVNGF+LPDAGSPLDYN 
Sbjct: 130 VAVGNSYSSAFESGFNDRQTDLKTRVSFKYSTSRGVFGTPFFFVNGFVLPDAGSPLDYNG 189

Query: 14  WRSI 3
           WRSI
Sbjct: 190 WRSI 193


>ref|NP_001235579.1| uncharacterized protein LOC100500267 precursor [Glycine max]
           gi|255629877|gb|ACU15289.1| unknown [Glycine max]
          Length = 236

 Score =  231 bits (590), Expect = 2e-58
 Identities = 104/184 (56%), Positives = 134/184 (72%)
 Frame = -3

Query: 554 PAKFDGFVYNKNHRRMEDLIIIEAFFDPVCPDSRDAWPPLKQILQHYGSRISLIVHPFPL 375
           P++FDGFVY K +  + D ++IEAF+DPVCPDSRD+WPPLKQ L HY SR+SL++H  PL
Sbjct: 30  PSRFDGFVYGKGNLNLLDTVLIEAFYDPVCPDSRDSWPPLKQALHHYASRVSLLLHLLPL 89

Query: 374 PYHENAFVSSRALHIVDKLNASATYNMLEMFFKHQGKFYNQPTHKMSRKAVVDSVVKLXX 195
           PYH+NAFV+SRALHIV+ LNASAT+ +LE FF++Q  FY   T  +SR ++++ VVK   
Sbjct: 90  PYHDNAFVTSRALHIVNNLNASATFPLLEWFFRYQENFYGAQTRNLSRASIIEEVVKSAT 149

Query: 194 XXXXXXXXXXXXXSFDDRETDLRTRVSFKYGCSRGVSGTPFFFVNGFLLPDAGSPLDYNN 15
                         F+D  TD++TRVSFKY  SRGV GTPFF+VNGFLLPD G+ +DY  
Sbjct: 150 QVVGSSYYKTIKNGFNDTTTDIQTRVSFKYAASRGVYGTPFFYVNGFLLPDTGAAVDYKT 209

Query: 14  WRSI 3
           WR +
Sbjct: 210 WRKV 213


>ref|XP_002510591.1| conserved hypothetical protein [Ricinus communis]
           gi|223551292|gb|EEF52778.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 362

 Score =  230 bits (587), Expect = 5e-58
 Identities = 109/184 (59%), Positives = 135/184 (73%), Gaps = 2/184 (1%)
 Frame = -3

Query: 554 PAKFDGFVYNKNH--RRMEDLIIIEAFFDPVCPDSRDAWPPLKQILQHYGSRISLIVHPF 381
           PA++DGF+Y K+   R   D I+IEAFFDPVCPDSRD+WPPLKQ L +YGSR SL++H  
Sbjct: 28  PARYDGFLYEKHGPCRHHADTILIEAFFDPVCPDSRDSWPPLKQALHYYGSRTSLLLHLL 87

Query: 380 PLPYHENAFVSSRALHIVDKLNASATYNMLEMFFKHQGKFYNQPTHKMSRKAVVDSVVKL 201
           PLPYH+NA+V+SRALHI + LN S+T+ +LE FFKHQ +FYN  T  +SR +VV  +V+ 
Sbjct: 88  PLPYHDNAYVASRALHIANNLNHSSTFPLLERFFKHQERFYNAQTRNLSRVSVVKDIVEF 147

Query: 200 XXXXXXXXXXXXXXXSFDDRETDLRTRVSFKYGCSRGVSGTPFFFVNGFLLPDAGSPLDY 21
                           F+DRETDL+TRVSFKY  SRGV GTP F++NGF+LPDAGS LDY
Sbjct: 148 ASVAIGNSYHSAIESGFNDRETDLQTRVSFKYSTSRGVFGTPTFYINGFVLPDAGSTLDY 207

Query: 20  NNWR 9
           N WR
Sbjct: 208 NGWR 211


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