BLASTX nr result
ID: Coptis21_contig00000496
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00000496 (1595 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp|P48496.1|TPIC_SPIOL RecName: Full=Triosephosphate isomerase, ... 408 e-133 ref|XP_002274871.1| PREDICTED: triosephosphate isomerase, chloro... 427 e-132 gb|ADG27841.1| triosephosphate isomerase [Gossypium hirsutum] 414 e-129 ref|XP_004147017.1| PREDICTED: triosephosphate isomerase, chloro... 415 e-127 ref|XP_002529248.1| triosephosphate isomerase, putative [Ricinus... 412 e-127 >sp|P48496.1|TPIC_SPIOL RecName: Full=Triosephosphate isomerase, chloroplastic; Short=TIM; Short=Triose-phosphate isomerase; Flags: Precursor gi|806312|gb|AAA66289.1| triosephosphate isomerase, chloroplast isozyme [Spinacia oleracea] Length = 322 Score = 408 bits (1049), Expect(2) = e-133 Identities = 205/269 (76%), Positives = 227/269 (84%) Frame = +1 Query: 547 NWKCNGTKDSISKLVSDLNNATLEXXXXXXXXXXFVYLDQVKNTLTDRVEISAQNSWVGK 726 NWKCNGTK+SI+KLVSDLN+ATLE FVY+DQVK++LT RVEISAQN W+GK Sbjct: 78 NWKCNGTKESITKLVSDLNSATLEADVDVVVAPPFVYIDQVKSSLTGRVEISAQNCWIGK 137 Query: 727 GGAFTGXXXXXXXXXXXXXXXXXXXXXXXXEISVEQLKDIGCKWVILGHSERRHVIGEDD 906 GGAFTG EISVEQLKD+GC+WVILGHSERRHVIGE + Sbjct: 138 GGAFTG------------------------EISVEQLKDLGCQWVILGHSERRHVIGEQN 173 Query: 907 QFIGKKAAYALSENLKVIACIGEKLEEREAGKTFDVCFQQLKAFADSVPSWDDVVVAYEP 1086 +FIGKKAAYAL++ + VIACIGE LEEREAGKTFDVC+QQLKAFAD++PSWD+VVVAYEP Sbjct: 174 EFIGKKAAYALNQGVGVIACIGELLEEREAGKTFDVCYQQLKAFADALPSWDNVVVAYEP 233 Query: 1087 VWAIGTGKVASPEQAQEVHVAVRDWLKKNVSAEVASKTRIIYGGSVNGSNCAELAKKEDI 1266 VWAIGTGKVASP+QAQEVHVAVRDWLKKNVS EVASKTRIIYGGSVNG NCAELAK+EDI Sbjct: 234 VWAIGTGKVASPDQAQEVHVAVRDWLKKNVSEEVASKTRIIYGGSVNGGNCAELAKQEDI 293 Query: 1267 DGFLVGGASLKGPEFATIINSVTSKKVAA 1353 DGFLVGGASLKGPEFATI+NSVT+KKVAA Sbjct: 294 DGFLVGGASLKGPEFATIVNSVTAKKVAA 322 Score = 94.4 bits (233), Expect(2) = e-133 Identities = 53/83 (63%), Positives = 64/83 (77%), Gaps = 2/83 (2%) Frame = +2 Query: 239 MALVSTSLASNPKSTAAAVISSSHFSGLRRSCLKFDQSES-RNSFFNQIDSHLRISSTKK 415 MA+VSTSLAS + +AV S+ FSGLRRS LK + S S ++SFF +DSHLR+SS+ + Sbjct: 1 MAVVSTSLASQITNPNSAV--STQFSGLRRSFLKLENSVSTQSSFFQNVDSHLRLSSSSR 58 Query: 416 GC-RGVVAMAGSGTFFVGGNWKC 481 C RGVVAMAGSG FFVGGNWKC Sbjct: 59 RCPRGVVAMAGSGKFFVGGNWKC 81 >ref|XP_002274871.1| PREDICTED: triosephosphate isomerase, chloroplastic-like isoform 1 [Vitis vinifera] Length = 324 Score = 427 bits (1097), Expect(2) = e-132 Identities = 216/269 (80%), Positives = 229/269 (85%) Frame = +1 Query: 547 NWKCNGTKDSISKLVSDLNNATLEXXXXXXXXXXFVYLDQVKNTLTDRVEISAQNSWVGK 726 NWKCNGTKDSISKLVSDLN+A LE FVYLDQVKN+LTDR+EISAQNSWVGK Sbjct: 80 NWKCNGTKDSISKLVSDLNSAKLEADVDVVVAPPFVYLDQVKNSLTDRIEISAQNSWVGK 139 Query: 727 GGAFTGXXXXXXXXXXXXXXXXXXXXXXXXEISVEQLKDIGCKWVILGHSERRHVIGEDD 906 GGAFTG EISVEQLKDIGC WVILGHSERRHVIGEDD Sbjct: 140 GGAFTG------------------------EISVEQLKDIGCNWVILGHSERRHVIGEDD 175 Query: 907 QFIGKKAAYALSENLKVIACIGEKLEEREAGKTFDVCFQQLKAFADSVPSWDDVVVAYEP 1086 QFIGKKAAYALS+ LKVIACIGE L+EREAGKTFDVCFQQ+KAFAD+VPSWDDVV+AYEP Sbjct: 176 QFIGKKAAYALSQGLKVIACIGELLQEREAGKTFDVCFQQMKAFADAVPSWDDVVIAYEP 235 Query: 1087 VWAIGTGKVASPEQAQEVHVAVRDWLKKNVSAEVASKTRIIYGGSVNGSNCAELAKKEDI 1266 VWAIGTGKVA+P QAQEVH+AVRDWLKKNVSAEVASKTRIIYGGSVNGSNC+ELAK+EDI Sbjct: 236 VWAIGTGKVATPLQAQEVHIAVRDWLKKNVSAEVASKTRIIYGGSVNGSNCSELAKQEDI 295 Query: 1267 DGFLVGGASLKGPEFATIINSVTSKKVAA 1353 DGFLVGGASLKGPEFA I+NSVTSKKVAA Sbjct: 296 DGFLVGGASLKGPEFAVIVNSVTSKKVAA 324 Score = 74.7 bits (182), Expect(2) = e-132 Identities = 49/86 (56%), Positives = 57/86 (66%), Gaps = 6/86 (6%) Frame = +2 Query: 242 ALVSTSLASN---PKSTAAAVISSS--HFSGLRRSCLKFDQSESRNSFFNQIDSHLRISS 406 A+ STSLAS PK+T + SS FSGLRRS D S FF+ S+LRISS Sbjct: 3 AVTSTSLASQLSTPKATTPSYSYSSATQFSGLRRSFSNLDHSPQ--PFFS---SNLRISS 57 Query: 407 T-KKGCRGVVAMAGSGTFFVGGNWKC 481 + +K CRG+VAMAGSG FFVGGNWKC Sbjct: 58 SPRKPCRGIVAMAGSGKFFVGGNWKC 83 >gb|ADG27841.1| triosephosphate isomerase [Gossypium hirsutum] Length = 307 Score = 414 bits (1065), Expect(2) = e-129 Identities = 209/269 (77%), Positives = 225/269 (83%) Frame = +1 Query: 547 NWKCNGTKDSISKLVSDLNNATLEXXXXXXXXXXFVYLDQVKNTLTDRVEISAQNSWVGK 726 NWKCNGTKDSI+KLVSDLN+A LE FVYLDQV +LT R+E+SAQNSW+GK Sbjct: 63 NWKCNGTKDSITKLVSDLNSAKLETDVDVVVSPPFVYLDQVTASLTSRIEVSAQNSWIGK 122 Query: 727 GGAFTGXXXXXXXXXXXXXXXXXXXXXXXXEISVEQLKDIGCKWVILGHSERRHVIGEDD 906 GGAFTG EISVEQLKDIGCKWVILGHSERRH+IGEDD Sbjct: 123 GGAFTG------------------------EISVEQLKDIGCKWVILGHSERRHIIGEDD 158 Query: 907 QFIGKKAAYALSENLKVIACIGEKLEEREAGKTFDVCFQQLKAFADSVPSWDDVVVAYEP 1086 QFIGKKAAYAL+E L VIACIGE LEEREAGKTFDVCF+QLKAFAD VPSWD++V+AYEP Sbjct: 159 QFIGKKAAYALNEGLGVIACIGELLEEREAGKTFDVCFRQLKAFADVVPSWDNIVIAYEP 218 Query: 1087 VWAIGTGKVASPEQAQEVHVAVRDWLKKNVSAEVASKTRIIYGGSVNGSNCAELAKKEDI 1266 VWAIGTGKVA+P+QAQEVHVAV DWLKKNVS EVASKTRIIYGGSVNGSNCAELAK+EDI Sbjct: 219 VWAIGTGKVATPQQAQEVHVAVHDWLKKNVSEEVASKTRIIYGGSVNGSNCAELAKQEDI 278 Query: 1267 DGFLVGGASLKGPEFATIINSVTSKKVAA 1353 DGFLVGGASLKGPEFATI+NSVTSKKVAA Sbjct: 279 DGFLVGGASLKGPEFATIVNSVTSKKVAA 307 Score = 76.3 bits (186), Expect(2) = e-129 Identities = 36/58 (62%), Positives = 44/58 (75%) Frame = +2 Query: 308 HFSGLRRSCLKFDQSESRNSFFNQIDSHLRISSTKKGCRGVVAMAGSGTFFVGGNWKC 481 HF+GL RS K D S+S+ SF I+S LR++S++K CR V AMAGSG FFVGGNWKC Sbjct: 10 HFNGLHRSSPKLDSSQSQ-SFLQHINSQLRLASSRKPCRAVTAMAGSGKFFVGGNWKC 66 >ref|XP_004147017.1| PREDICTED: triosephosphate isomerase, chloroplastic-like [Cucumis sativus] gi|449489711|ref|XP_004158393.1| PREDICTED: triosephosphate isomerase, chloroplastic-like [Cucumis sativus] Length = 306 Score = 415 bits (1067), Expect(2) = e-127 Identities = 208/268 (77%), Positives = 225/268 (83%) Frame = +1 Query: 547 NWKCNGTKDSISKLVSDLNNATLEXXXXXXXXXXFVYLDQVKNTLTDRVEISAQNSWVGK 726 NWKCNGTK+SI+KLV+DLNNA LE FVY++QVK++LT R+EISAQNSWV K Sbjct: 62 NWKCNGTKESIAKLVADLNNAKLEDDVDVVVAPPFVYIEQVKSSLTSRIEISAQNSWVSK 121 Query: 727 GGAFTGXXXXXXXXXXXXXXXXXXXXXXXXEISVEQLKDIGCKWVILGHSERRHVIGEDD 906 GGAFTG EISVEQLKDIGCKWVILGHSERRHVIGEDD Sbjct: 122 GGAFTG------------------------EISVEQLKDIGCKWVILGHSERRHVIGEDD 157 Query: 907 QFIGKKAAYALSENLKVIACIGEKLEEREAGKTFDVCFQQLKAFADSVPSWDDVVVAYEP 1086 QFIGKKAAYALSE L VIACIGE LEEREAGKTFDVCFQQLKA+AD+VPSWD +V+AYEP Sbjct: 158 QFIGKKAAYALSEGLGVIACIGELLEEREAGKTFDVCFQQLKAYADAVPSWDSIVIAYEP 217 Query: 1087 VWAIGTGKVASPEQAQEVHVAVRDWLKKNVSAEVASKTRIIYGGSVNGSNCAELAKKEDI 1266 VWAIGTGKVA+PEQAQEVH A+RDWLKKNVS+EVASKTRIIYGGSVNGSNCAELAKKEDI Sbjct: 218 VWAIGTGKVATPEQAQEVHAAIRDWLKKNVSSEVASKTRIIYGGSVNGSNCAELAKKEDI 277 Query: 1267 DGFLVGGASLKGPEFATIINSVTSKKVA 1350 DGFLVGGASLKGPEF TI+NSVT+KKVA Sbjct: 278 DGFLVGGASLKGPEFGTIVNSVTAKKVA 305 Score = 68.6 bits (166), Expect(2) = e-127 Identities = 41/81 (50%), Positives = 49/81 (60%) Frame = +2 Query: 239 MALVSTSLASNPKSTAAAVISSSHFSGLRRSCLKFDQSESRNSFFNQIDSHLRISSTKKG 418 MA VSTSLAS FS LR S D S +S F+ + S +R++S++KG Sbjct: 1 MAAVSTSLASR-------------FSPLRFSSSNSDIS---HSLFHNVHSQIRLASSRKG 44 Query: 419 CRGVVAMAGSGTFFVGGNWKC 481 RGVV MAGSG FFVGGNWKC Sbjct: 45 SRGVVTMAGSGKFFVGGNWKC 65 >ref|XP_002529248.1| triosephosphate isomerase, putative [Ricinus communis] gi|223531284|gb|EEF33126.1| triosephosphate isomerase, putative [Ricinus communis] Length = 313 Score = 412 bits (1060), Expect(2) = e-127 Identities = 207/269 (76%), Positives = 226/269 (84%) Frame = +1 Query: 547 NWKCNGTKDSISKLVSDLNNATLEXXXXXXXXXXFVYLDQVKNTLTDRVEISAQNSWVGK 726 NWKCNGTK+SISKLVSDLN+A LE F+Y+DQVK++LTDR+EISAQNSWV K Sbjct: 69 NWKCNGTKESISKLVSDLNDAKLEADVDVVVAPPFIYIDQVKSSLTDRIEISAQNSWVSK 128 Query: 727 GGAFTGXXXXXXXXXXXXXXXXXXXXXXXXEISVEQLKDIGCKWVILGHSERRHVIGEDD 906 GGAFTG EISVEQL DIGCKWVILGHSERRHVIGE+D Sbjct: 129 GGAFTG------------------------EISVEQLNDIGCKWVILGHSERRHVIGEND 164 Query: 907 QFIGKKAAYALSENLKVIACIGEKLEEREAGKTFDVCFQQLKAFADSVPSWDDVVVAYEP 1086 +FIGKKAAYALS+ L VIACIGE LEEREAGKTFDVCFQQLKA+AD+VPSWD +V+AYEP Sbjct: 165 EFIGKKAAYALSQGLGVIACIGELLEEREAGKTFDVCFQQLKAYADAVPSWDKIVIAYEP 224 Query: 1087 VWAIGTGKVASPEQAQEVHVAVRDWLKKNVSAEVASKTRIIYGGSVNGSNCAELAKKEDI 1266 VWAIGTGKVA+P+QAQEVHVA+RDWLKKN+S EVASKTRIIYGGSVNG NCAELAK+EDI Sbjct: 225 VWAIGTGKVATPQQAQEVHVALRDWLKKNISEEVASKTRIIYGGSVNGGNCAELAKQEDI 284 Query: 1267 DGFLVGGASLKGPEFATIINSVTSKKVAA 1353 DGFLVGGASLKGPEFATIINSVTSKKVAA Sbjct: 285 DGFLVGGASLKGPEFATIINSVTSKKVAA 313 Score = 70.9 bits (172), Expect(2) = e-127 Identities = 43/83 (51%), Positives = 54/83 (65%), Gaps = 2/83 (2%) Frame = +2 Query: 239 MALVSTSLASNPKSTAAAVISSSHFSGLRRSCLKFDQSESRN-SFFNQIDSHLR-ISSTK 412 MA++STSL+ S FSGLR+SC K ++ S + SF +S LR ISS++ Sbjct: 1 MAMLSTSLSG-----------PSQFSGLRQSCPKLLETHSLSQSFLRHFNSQLRSISSSR 49 Query: 413 KGCRGVVAMAGSGTFFVGGNWKC 481 K R VVAMAG+GTFFVGGNWKC Sbjct: 50 KPSRHVVAMAGTGTFFVGGNWKC 72