BLASTX nr result

ID: Coptis21_contig00000494 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000494
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265940.2| PREDICTED: 60S ribosomal protein L5-like [Vi...    86   4e-15
emb|CBI38287.3| unnamed protein product [Vitis vinifera]               86   4e-15
gb|AFK39593.1| unknown [Lotus japonicus]                               82   6e-14
gb|AFK36106.1| unknown [Lotus japonicus]                               80   2e-13
ref|XP_002524859.1| ribosomal protein L5, putative [Ricinus comm...    79   4e-13

>ref|XP_002265940.2| PREDICTED: 60S ribosomal protein L5-like [Vitis vinifera]
          Length = 262

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 42/50 (84%), Positives = 44/50 (88%)
 Frame = +3

Query: 3   AGIRADPTPKKSEKEAPKAHKRFNLKKLTYDERRNKLIARLNALNSAAGA 152
           A IRADPTPKKSEKE PK HKR NLKKLTY+ER+ KLI RLNALNSAAGA
Sbjct: 205 ASIRADPTPKKSEKEPPKVHKRHNLKKLTYEERKAKLIERLNALNSAAGA 254


>emb|CBI38287.3| unnamed protein product [Vitis vinifera]
          Length = 95

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 42/50 (84%), Positives = 44/50 (88%)
 Frame = +3

Query: 3   AGIRADPTPKKSEKEAPKAHKRFNLKKLTYDERRNKLIARLNALNSAAGA 152
           A IRADPTPKKSEKE PK HKR NLKKLTY+ER+ KLI RLNALNSAAGA
Sbjct: 38  ASIRADPTPKKSEKEPPKVHKRHNLKKLTYEERKAKLIERLNALNSAAGA 87


>gb|AFK39593.1| unknown [Lotus japonicus]
          Length = 301

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 40/48 (83%), Positives = 42/48 (87%)
 Frame = +3

Query: 3   AGIRADPTPKKSEKEAPKAHKRFNLKKLTYDERRNKLIARLNALNSAA 146
           A IRADPT KKSEK  PK HKR+NLKKLTYDER+NKLIARL ALNSAA
Sbjct: 244 AAIRADPTSKKSEKPQPKEHKRYNLKKLTYDERKNKLIARLQALNSAA 291


>gb|AFK36106.1| unknown [Lotus japonicus]
          Length = 302

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 39/49 (79%), Positives = 42/49 (85%)
 Frame = +3

Query: 3   AGIRADPTPKKSEKEAPKAHKRFNLKKLTYDERRNKLIARLNALNSAAG 149
           A IRADP+ KKS K  PK HKR+NLKKLTYDER+NKLIARL ALNSAAG
Sbjct: 244 AAIRADPSTKKSGKPEPKEHKRYNLKKLTYDERKNKLIARLQALNSAAG 292


>ref|XP_002524859.1| ribosomal protein L5, putative [Ricinus communis]
           gi|223535822|gb|EEF37483.1| ribosomal protein L5,
           putative [Ricinus communis]
          Length = 299

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 38/50 (76%), Positives = 43/50 (86%)
 Frame = +3

Query: 3   AGIRADPTPKKSEKEAPKAHKRFNLKKLTYDERRNKLIARLNALNSAAGA 152
           A IRADP+PKKSEK+ PK HKR+NLKKLTY+ER+ KLI RL ALNSAA A
Sbjct: 244 AAIRADPSPKKSEKQPPKEHKRYNLKKLTYEERKAKLIERLQALNSAADA 293


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