BLASTX nr result
ID: Coptis21_contig00000494
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00000494 (412 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002265940.2| PREDICTED: 60S ribosomal protein L5-like [Vi... 86 4e-15 emb|CBI38287.3| unnamed protein product [Vitis vinifera] 86 4e-15 gb|AFK39593.1| unknown [Lotus japonicus] 82 6e-14 gb|AFK36106.1| unknown [Lotus japonicus] 80 2e-13 ref|XP_002524859.1| ribosomal protein L5, putative [Ricinus comm... 79 4e-13 >ref|XP_002265940.2| PREDICTED: 60S ribosomal protein L5-like [Vitis vinifera] Length = 262 Score = 85.5 bits (210), Expect = 4e-15 Identities = 42/50 (84%), Positives = 44/50 (88%) Frame = +3 Query: 3 AGIRADPTPKKSEKEAPKAHKRFNLKKLTYDERRNKLIARLNALNSAAGA 152 A IRADPTPKKSEKE PK HKR NLKKLTY+ER+ KLI RLNALNSAAGA Sbjct: 205 ASIRADPTPKKSEKEPPKVHKRHNLKKLTYEERKAKLIERLNALNSAAGA 254 >emb|CBI38287.3| unnamed protein product [Vitis vinifera] Length = 95 Score = 85.5 bits (210), Expect = 4e-15 Identities = 42/50 (84%), Positives = 44/50 (88%) Frame = +3 Query: 3 AGIRADPTPKKSEKEAPKAHKRFNLKKLTYDERRNKLIARLNALNSAAGA 152 A IRADPTPKKSEKE PK HKR NLKKLTY+ER+ KLI RLNALNSAAGA Sbjct: 38 ASIRADPTPKKSEKEPPKVHKRHNLKKLTYEERKAKLIERLNALNSAAGA 87 >gb|AFK39593.1| unknown [Lotus japonicus] Length = 301 Score = 81.6 bits (200), Expect = 6e-14 Identities = 40/48 (83%), Positives = 42/48 (87%) Frame = +3 Query: 3 AGIRADPTPKKSEKEAPKAHKRFNLKKLTYDERRNKLIARLNALNSAA 146 A IRADPT KKSEK PK HKR+NLKKLTYDER+NKLIARL ALNSAA Sbjct: 244 AAIRADPTSKKSEKPQPKEHKRYNLKKLTYDERKNKLIARLQALNSAA 291 >gb|AFK36106.1| unknown [Lotus japonicus] Length = 302 Score = 79.7 bits (195), Expect = 2e-13 Identities = 39/49 (79%), Positives = 42/49 (85%) Frame = +3 Query: 3 AGIRADPTPKKSEKEAPKAHKRFNLKKLTYDERRNKLIARLNALNSAAG 149 A IRADP+ KKS K PK HKR+NLKKLTYDER+NKLIARL ALNSAAG Sbjct: 244 AAIRADPSTKKSGKPEPKEHKRYNLKKLTYDERKNKLIARLQALNSAAG 292 >ref|XP_002524859.1| ribosomal protein L5, putative [Ricinus communis] gi|223535822|gb|EEF37483.1| ribosomal protein L5, putative [Ricinus communis] Length = 299 Score = 79.0 bits (193), Expect = 4e-13 Identities = 38/50 (76%), Positives = 43/50 (86%) Frame = +3 Query: 3 AGIRADPTPKKSEKEAPKAHKRFNLKKLTYDERRNKLIARLNALNSAAGA 152 A IRADP+PKKSEK+ PK HKR+NLKKLTY+ER+ KLI RL ALNSAA A Sbjct: 244 AAIRADPSPKKSEKQPPKEHKRYNLKKLTYEERKAKLIERLQALNSAADA 293