BLASTX nr result
ID: Coptis21_contig00000487
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00000487
(1745 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002283376.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 691 0.0
ref|XP_004145492.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 665 0.0
ref|XP_002515408.1| Ubiquitin carboxyl-terminal hydrolase, putat... 640 0.0
ref|XP_002309685.1| predicted protein [Populus trichocarpa] gi|2... 637 e-180
emb|CBI21158.3| unnamed protein product [Vitis vinifera] 637 e-180
>ref|XP_002283376.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Vitis
vinifera]
Length = 553
Score = 691 bits (1783), Expect = 0.0
Identities = 340/531 (64%), Positives = 408/531 (76%), Gaps = 6/531 (1%)
Frame = +1
Query: 169 MSNRNPTYTNPLPCSHLITYKQKNGFTGYKFLQTSLKTSPNGRASMYNREKNKKST-FCD 345
MS +NP+YTNP PC HL YK ++G G+K LQ LKT+P GR S+ K+K T C
Sbjct: 1 MSKQNPSYTNPKPCKHLADYKLRHGLNGFKTLQNCLKTTPYGRTSV---SKHKSETPRCS 57
Query: 346 VC--QNGRMYYCLVCYSVSCSNHASENG---HGHEIGIDMERAELFCFVCCDQVYDPDFD 510
+C GR+Y+CL+C S++CS+HA+E+ HGHEI +D+ERAEL+C VC DQVYDPDFD
Sbjct: 58 LCFGYQGRLYFCLICSSITCSSHANEHSQSHHGHEIAVDVERAELYCCVCRDQVYDPDFD 117
Query: 511 KAVMCKQIMELPRNSNGVDXXXXXXXXXXXXXXXXXXGSLESGSTKNPIKLVLKIRRGSS 690
+AV+ K M++P N NGV+ LE +K +L+ R +
Sbjct: 118 RAVVSKHFMDMPSNVNGVEGVVEESNKRRRLGLGL---ELEWKRSK---RLISMADRRAK 171
Query: 691 SMFPWGLRGLSNLGNTCFMNSVLQALLHTPPLRNYFLSGRHNHETCMKTPTDRLCLHCDI 870
S+FP GLRGL+NLGNTCFMNSVLQAL H PPLRNYFLS RHN ++C + +DRLCL CDI
Sbjct: 172 SIFPLGLRGLNNLGNTCFMNSVLQALFHAPPLRNYFLSDRHNRQSCRRRSSDRLCLPCDI 231
Query: 871 NAIFTAVFSGDRKPYSPAQFLYSWWQHSANLASYEQQDAHEFFISVLDRIHEREERTKPK 1050
+ IF+AVFSGDR PYSPA+FLYSWWQHS NLASYEQQDAHEFFIS+LD+IH +E ++ +
Sbjct: 232 DVIFSAVFSGDRTPYSPARFLYSWWQHSENLASYEQQDAHEFFISMLDQIHVKEGKSGNQ 291
Query: 1051 SKDSGDCQCIAHRVFSGVLRSDVXXXXXXXXXXXYDPCLDISLNLETANIFSKGVSEKSG 1230
KD+ DCQCIAH+ FSG+LRSDV YDPC+DISLNL+ + S G++ ++
Sbjct: 292 DKDNRDCQCIAHKAFSGLLRSDVTCTTCGFTSTTYDPCVDISLNLDMSFCPSTGMTNRTT 351
Query: 1231 KTSQDTSISTLLGCLDLFTRPEKLGSDQKLYCQHCQVRRDSLKQMSIRRLPSVLCFHMKR 1410
K +++ ISTLLGCLDLFTRPEKLG DQKLYCQ+CQ RR+SLKQMSIRRLP VLC H+KR
Sbjct: 352 KPNENAIISTLLGCLDLFTRPEKLGPDQKLYCQNCQERRNSLKQMSIRRLPIVLCLHIKR 411
Query: 1411 FEHSLIRKKSRKIDRYLQFPFSLDMTPYLSSSIVRNRFGNRIFAFEGDESDISTEFEVFA 1590
FEHS IRK SRKID+YLQFPFSLDMTPYLSSSIVRNRFGNRIF FEGDES+ TEFEVFA
Sbjct: 412 FEHSTIRKMSRKIDQYLQFPFSLDMTPYLSSSIVRNRFGNRIFTFEGDESETCTEFEVFA 471
Query: 1591 VVTHSGNLESGHYVTYLRLRNQWYKCDDAWITQVSDGVVRASQGYLLYYVQ 1743
VVTHSG LESGHYVTY+R+RN+WYKCDDAWIT+V +GVVRASQ YL+YYVQ
Sbjct: 472 VVTHSGMLESGHYVTYVRVRNRWYKCDDAWITEVDEGVVRASQCYLMYYVQ 522
>ref|XP_004145492.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Cucumis
sativus] gi|449515075|ref|XP_004164575.1| PREDICTED:
ubiquitin carboxyl-terminal hydrolase 22-like [Cucumis
sativus]
Length = 552
Score = 665 bits (1715), Expect = 0.0
Identities = 325/530 (61%), Positives = 394/530 (74%), Gaps = 5/530 (0%)
Frame = +1
Query: 169 MSNRNPTYTNPLPCSHLITYKQKNGFTGYKFLQTSLKTSPNGRASMYNREKNKKSTFCDV 348
MS RNP+Y+NP PC+HL YK + G GYK +Q LKTSPNGR S+ N + K C
Sbjct: 1 MSQRNPSYSNPTPCNHLADYKLRYGLNGYKSIQNHLKTSPNGRTSIQNPDS--KLPRCGS 58
Query: 349 CQN--GRMYYCLVCYSVSCSNHAS---ENGHGHEIGIDMERAELFCFVCCDQVYDPDFDK 513
C GR+Y CL+C S+SCSNH ++ +GH++ +D+ERAEL+C+ C DQVYDPDFD+
Sbjct: 59 CDGYKGRLYICLICASISCSNHTLLHYQSENGHDLAVDVERAELYCYACSDQVYDPDFDR 118
Query: 514 AVMCKQIMELPRNSNGVDXXXXXXXXXXXXXXXXXXGSLESGSTKNPIKLVLKIRRGSSS 693
VM K I+ +P S GS++ KN L+ + S S
Sbjct: 119 TVMSKHIV-VPEKSKSQSESIGERSSKRRRL-----GSVDLLDLKNLKPLISVKDQRSKS 172
Query: 694 MFPWGLRGLSNLGNTCFMNSVLQALLHTPPLRNYFLSGRHNHETCMKTPTDRLCLHCDIN 873
+P GLRGL+NLGNTCFMNSVLQ LHTPPL NYFL+ +HN ETC K P +LCL CDI+
Sbjct: 173 CYPLGLRGLNNLGNTCFMNSVLQVFLHTPPLSNYFLNDQHNRETCSKRPIGQLCLPCDID 232
Query: 874 AIFTAVFSGDRKPYSPAQFLYSWWQHSANLASYEQQDAHEFFISVLDRIHEREERTKPKS 1053
IF+AVFSGD PYSPAQFLYSWWQHSANLA YEQQDAHEFFISVLDRIHERE +++ +
Sbjct: 233 CIFSAVFSGDHMPYSPAQFLYSWWQHSANLACYEQQDAHEFFISVLDRIHERERKSRSQD 292
Query: 1054 KDSGDCQCIAHRVFSGVLRSDVXXXXXXXXXXXYDPCLDISLNLETANIFSKGVSEKSGK 1233
K++GDC+CIAHR FSG LRSDV YDPC+DISL+L+T + S+ ++ K K
Sbjct: 293 KENGDCKCIAHRAFSGQLRSDVTCMTCGFTSTTYDPCVDISLDLDTQDFSSRNIAGKLTK 352
Query: 1234 TSQDTSISTLLGCLDLFTRPEKLGSDQKLYCQHCQVRRDSLKQMSIRRLPSVLCFHMKRF 1413
+ +S STL GCLDLFTRPEKLGSDQKL+CQ+CQ +R+S+KQMSIRRLP VLC H+KRF
Sbjct: 353 PADFSSKSTLSGCLDLFTRPEKLGSDQKLFCQNCQEKRNSVKQMSIRRLPLVLCLHIKRF 412
Query: 1414 EHSLIRKKSRKIDRYLQFPFSLDMTPYLSSSIVRNRFGNRIFAFEGDESDISTEFEVFAV 1593
EHS IR+ SRKIDRYLQFPFSLDM PYLSSSI+RNRFGNRIFA EGDE D S++FE+FAV
Sbjct: 413 EHSFIRRTSRKIDRYLQFPFSLDMIPYLSSSIIRNRFGNRIFASEGDELDASSKFEIFAV 472
Query: 1594 VTHSGNLESGHYVTYLRLRNQWYKCDDAWITQVSDGVVRASQGYLLYYVQ 1743
V+HSG LESGHYVTYLRLRN+WYKCDDAWIT+V + +VR SQ Y+++Y+Q
Sbjct: 473 VSHSGTLESGHYVTYLRLRNRWYKCDDAWITEVDEEMVRNSQCYMMFYLQ 522
>ref|XP_002515408.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
gi|223545352|gb|EEF46857.1| Ubiquitin carboxyl-terminal
hydrolase, putative [Ricinus communis]
Length = 551
Score = 640 bits (1650), Expect = 0.0
Identities = 316/529 (59%), Positives = 391/529 (73%), Gaps = 4/529 (0%)
Frame = +1
Query: 169 MSNRNPTYTNPLPCSHLITYKQKNGFTGYKFLQTSLKTSPNGRASMYNRE-KNKKSTFCD 345
M+ NP YTNP C HL YK ++G +GYKFLQ LKT+P+G S+Y + K + +FC
Sbjct: 1 MATSNPLYTNPKLCKHLADYKLRHGLSGYKFLQNCLKTTPSGITSVYKSDTKIPRCSFCK 60
Query: 346 VCQNGRMYYCLVCYSVSCSNHA---SENGHGHEIGIDMERAELFCFVCCDQVYDPDFDKA 516
Q GR + CL+C S+SCS+H +++ + H+I +D+ER+EL+C +C DQVYDPDFDK
Sbjct: 61 GYQ-GRFFMCLICSSISCSSHTLLHAQSENSHDIAVDIERSELYCSLCSDQVYDPDFDKV 119
Query: 517 VMCKQIMELPRNSNGVDXXXXXXXXXXXXXXXXXXGSLESGSTKNPIKLVLKIRRGSSSM 696
V+ K ++++P N++ VD SL K +LVL R S
Sbjct: 120 VVSKVMLDMPNNAHIVDDGIRRSSKRRKL------NSLMELDLKKSKQLVLMRDRREKSC 173
Query: 697 FPWGLRGLSNLGNTCFMNSVLQALLHTPPLRNYFLSGRHNHETCMKTPTDRLCLHCDINA 876
+P GLRGL+NLG+TCFMNSVLQALLH PP RNYFLS RH+ +TC K DRLCL C+I+
Sbjct: 174 YPLGLRGLNNLGSTCFMNSVLQALLHAPPFRNYFLSDRHDRDTCRKRSLDRLCLACNIDV 233
Query: 877 IFTAVFSGDRKPYSPAQFLYSWWQHSANLASYEQQDAHEFFISVLDRIHEREERTKPKSK 1056
I +A++SGDR PYSPAQFLYSWWQHSANLASYEQQDAHEFFI++LD IHE E + +K
Sbjct: 234 IISALYSGDRTPYSPAQFLYSWWQHSANLASYEQQDAHEFFIALLDGIHESEGNGRTPNK 293
Query: 1057 DSGDCQCIAHRVFSGVLRSDVXXXXXXXXXXXYDPCLDISLNLETANIFSKGVSEKSGKT 1236
D+GDCQCIAHRVFSG LRSDV YDPC+DISL+++T+ + S V KS +
Sbjct: 294 DNGDCQCIAHRVFSGRLRSDVTCMTCGFTSTTYDPCVDISLDMDTS-MSSTDVPNKSVRP 352
Query: 1237 SQDTSISTLLGCLDLFTRPEKLGSDQKLYCQHCQVRRDSLKQMSIRRLPSVLCFHMKRFE 1416
+++ TL CLDLFTRPEKLGSDQKLYCQ+C+ +RDS KQMSI+RLP VL H+KRFE
Sbjct: 353 NENAGKCTLSACLDLFTRPEKLGSDQKLYCQNCEEKRDSFKQMSIKRLPLVLSLHIKRFE 412
Query: 1417 HSLIRKKSRKIDRYLQFPFSLDMTPYLSSSIVRNRFGNRIFAFEGDESDISTEFEVFAVV 1596
HS +RK SRKID +LQFPFSLDMT YLSSSI+R RFGNRIFAF+ DE+D S EFE+FAV+
Sbjct: 413 HSPVRKLSRKIDWHLQFPFSLDMTSYLSSSILRKRFGNRIFAFDSDEADTSAEFEIFAVI 472
Query: 1597 THSGNLESGHYVTYLRLRNQWYKCDDAWITQVSDGVVRASQGYLLYYVQ 1743
THSG LESGHYVTYLRLRNQWYKCDDAWIT+V + +VRASQ Y+++YVQ
Sbjct: 473 THSGMLESGHYVTYLRLRNQWYKCDDAWITEVDETIVRASQCYMIFYVQ 521
>ref|XP_002309685.1| predicted protein [Populus trichocarpa] gi|222855661|gb|EEE93208.1|
predicted protein [Populus trichocarpa]
Length = 519
Score = 637 bits (1643), Expect = e-180
Identities = 314/519 (60%), Positives = 384/519 (73%), Gaps = 7/519 (1%)
Frame = +1
Query: 169 MSNRNPTYTNPLPCSHLITYKQKNGFTGYKFLQTSLKTSPNGRASMYNRE-KNKKSTFCD 345
M R+ + NP PC HL YK ++G +GYKFLQ LKT PNG+ S+ E K K +FC
Sbjct: 1 METRSSVFANPKPCKHLTDYKLRHGLSGYKFLQKWLKTFPNGKTSIKMCETKMPKCSFCS 60
Query: 346 VCQNGRMYYCLVCYSVSCSNHA---SENGHGHEIGIDMERAELFCFVCCDQVYDPDFDKA 516
+ GR++ CL+C S+SCS+H S++ +GH+I +D+ER+EL+C C DQVYD DFDK
Sbjct: 61 GIRQGRLFLCLICSSMSCSDHTLLHSQSENGHDIAVDIERSELYCCSCSDQVYDLDFDKV 120
Query: 517 VMCKQIMELPRNSNG--VDXXXXXXXXXXXXXXXXXXGSLESGSTKNPIKLVLKIR-RGS 687
V+ K I+++P + VD + S K + +R R +
Sbjct: 121 VVAKNIVDMPSKTRDSVVDDLMRRSSKRRRLNSVVDLDLIRS-------KFFVWMRGRRA 173
Query: 688 SSMFPWGLRGLSNLGNTCFMNSVLQALLHTPPLRNYFLSGRHNHETCMKTPTDRLCLHCD 867
S +P GLRGL+NLG+TCFMNS+LQALLH PP RNYFLS RH+ ETC K +D+ CL CD
Sbjct: 174 KSCYPLGLRGLNNLGSTCFMNSILQALLHAPPFRNYFLSERHDRETCRKRSSDQSCLACD 233
Query: 868 INAIFTAVFSGDRKPYSPAQFLYSWWQHSANLASYEQQDAHEFFISVLDRIHEREERTKP 1047
I IF+AV+SGDR PYSPAQFLYSWWQHSANLASYEQQDAHEFFISVLD IHERE + +
Sbjct: 234 IGVIFSAVYSGDRTPYSPAQFLYSWWQHSANLASYEQQDAHEFFISVLDGIHEREGKERN 293
Query: 1048 KSKDSGDCQCIAHRVFSGVLRSDVXXXXXXXXXXXYDPCLDISLNLETANIFSKGVSEKS 1227
+KD+GDCQCIAHRVFSG+LRSD+ YDPC+DISLN++T++ S V+ KS
Sbjct: 294 PNKDNGDCQCIAHRVFSGMLRSDLTCTTCGFTSTTYDPCVDISLNMDTSSFSSVDVANKS 353
Query: 1228 GKTSQDTSISTLLGCLDLFTRPEKLGSDQKLYCQHCQVRRDSLKQMSIRRLPSVLCFHMK 1407
+ ++DT STLL CLDLFTRPE+LGSDQKLYCQ+CQ +RDSLKQMSI+RLP VL H+K
Sbjct: 354 VRPNEDTGSSTLLACLDLFTRPERLGSDQKLYCQNCQEKRDSLKQMSIKRLPLVLSLHIK 413
Query: 1408 RFEHSLIRKKSRKIDRYLQFPFSLDMTPYLSSSIVRNRFGNRIFAFEGDESDISTEFEVF 1587
RFEHS +R+ SRKID +LQFPFSLDMTPYLS SIVRNRFGNRIF FE DE+DIS EFE+F
Sbjct: 414 RFEHSSLRRTSRKIDWHLQFPFSLDMTPYLSPSIVRNRFGNRIFGFESDEADISAEFEIF 473
Query: 1588 AVVTHSGNLESGHYVTYLRLRNQWYKCDDAWITQVSDGV 1704
AVVTHSG L+SGHYVTYLRL+NQWYKCDDAWIT+V + +
Sbjct: 474 AVVTHSGMLDSGHYVTYLRLQNQWYKCDDAWITEVDERI 512
>emb|CBI21158.3| unnamed protein product [Vitis vinifera]
Length = 529
Score = 637 bits (1642), Expect = e-180
Identities = 320/531 (60%), Positives = 387/531 (72%), Gaps = 6/531 (1%)
Frame = +1
Query: 169 MSNRNPTYTNPLPCSHLITYKQKNGFTGYKFLQTSLKTSPNGRASMYNREKNKKST-FCD 345
MS +NP+YTNP PC HL YK ++G G+K LQ LKT+P GR S+ K+K T C
Sbjct: 1 MSKQNPSYTNPKPCKHLADYKLRHGLNGFKTLQNCLKTTPYGRTSV---SKHKSETPRCS 57
Query: 346 VC--QNGRMYYCLVCYSVSCSNHASENG---HGHEIGIDMERAELFCFVCCDQVYDPDFD 510
+C GR+Y+CL+C S++CS+HA+E+ HGHEI +D+ERAEL+C VC DQVYDPDFD
Sbjct: 58 LCFGYQGRLYFCLICSSITCSSHANEHSQSHHGHEIAVDVERAELYCCVCRDQVYDPDFD 117
Query: 511 KAVMCKQIMELPRNSNGVDXXXXXXXXXXXXXXXXXXGSLESGSTKNPIKLVLKIRRGSS 690
+AV+ K M++P N NGV+ LE +K +L+ R +
Sbjct: 118 RAVVSKHFMDMPSNVNGVEGVVEESNKRRRLGLGL---ELEWKRSK---RLISMADRRAK 171
Query: 691 SMFPWGLRGLSNLGNTCFMNSVLQALLHTPPLRNYFLSGRHNHETCMKTPTDRLCLHCDI 870
S+FP GLRGL+NLGNTCFMNSVLQAL H PPLRNYFLS RHN ++C + +DRLCL CDI
Sbjct: 172 SIFPLGLRGLNNLGNTCFMNSVLQALFHAPPLRNYFLSDRHNRQSCRRRSSDRLCLPCDI 231
Query: 871 NAIFTAVFSGDRKPYSPAQFLYSWWQHSANLASYEQQDAHEFFISVLDRIHEREERTKPK 1050
+ IF+AVFSGDR PYSPA+FLYSWWQHS NLASYEQQDAHEFFIS+LD+IH +E ++ +
Sbjct: 232 DVIFSAVFSGDRTPYSPARFLYSWWQHSENLASYEQQDAHEFFISMLDQIHVKEGKSGNQ 291
Query: 1051 SKDSGDCQCIAHRVFSGVLRSDVXXXXXXXXXXXYDPCLDISLNLETANIFSKGVSEKSG 1230
KD+ DCQCIAH+ FSG+LRSDV YDPC+DISLNL+ + S G++ ++
Sbjct: 292 DKDNRDCQCIAHKAFSGLLRSDVTCTTCGFTSTTYDPCVDISLNLDMSFCPSTGMTNRTT 351
Query: 1231 KTSQDTSISTLLGCLDLFTRPEKLGSDQKLYCQHCQVRRDSLKQMSIRRLPSVLCFHMKR 1410
K +++ ISTLLGCLDLFTRPEKLG DQKLYCQ+CQ RR+SLKQMSIRRLP VLC H+KR
Sbjct: 352 KPNENAIISTLLGCLDLFTRPEKLGPDQKLYCQNCQERRNSLKQMSIRRLPIVLCLHIKR 411
Query: 1411 FEHSLIRKKSRKIDRYLQFPFSLDMTPYLSSSIVRNRFGNRIFAFEGDESDISTEFEVFA 1590
FEHS IRK SRKID+YLQFPFSLDMTPYLSSSI VFA
Sbjct: 412 FEHSTIRKMSRKIDQYLQFPFSLDMTPYLSSSI------------------------VFA 447
Query: 1591 VVTHSGNLESGHYVTYLRLRNQWYKCDDAWITQVSDGVVRASQGYLLYYVQ 1743
VVTHSG LESGHYVTY+R+RN+WYKCDDAWIT+V +GVVRASQ YL+YYVQ
Sbjct: 448 VVTHSGMLESGHYVTYVRVRNRWYKCDDAWITEVDEGVVRASQCYLMYYVQ 498