BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000481
         (482 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265789.1| PREDICTED: DNA polymerase alpha subunit B [V...   150   8e-35
ref|XP_002514998.1| alpha DNA polymerase, putative [Ricinus comm...   135   3e-30
ref|XP_002438164.1| hypothetical protein SORBIDRAFT_10g009040 [S...   129   2e-28
dbj|BAK05466.1| predicted protein [Hordeum vulgare subsp. vulgare]    129   2e-28
ref|NP_176930.2| DNA polymerase alpha 2 [Arabidopsis thaliana] g...   129   3e-28

>ref|XP_002265789.1| PREDICTED: DNA polymerase alpha subunit B [Vitis vinifera]
           gi|297738371|emb|CBI27572.3| unnamed protein product
           [Vitis vinifera]
          Length = 623

 Score =  150 bits (380), Expect = 8e-35
 Identities = 71/95 (74%), Positives = 84/95 (88%), Gaps = 1/95 (1%)
 Frame = +1

Query: 124 LLKLGPFVDSKHPEISKGTIERSFDDIFHSDILRRVQDYAEYMGYATRVVLVPSLQDAYH 303
           L+ LGPFVDS+HPEI KGT++RSFD+IFH +ILRR+QDY EYMG A RV+LVPS++DA H
Sbjct: 393 LILLGPFVDSEHPEIRKGTVDRSFDEIFHLEILRRLQDYVEYMGSAARVILVPSIRDANH 452

Query: 304 DFVFPQPAFDIH-SDLKNQITCLTNPGLFDANKVK 405
           DFVFPQPAF IH  DLK+QIT LTNPG+FDAN+VK
Sbjct: 453 DFVFPQPAFSIHPPDLKHQITSLTNPGMFDANEVK 487


>ref|XP_002514998.1| alpha DNA polymerase, putative [Ricinus communis]
           gi|223546049|gb|EEF47552.1| alpha DNA polymerase,
           putative [Ricinus communis]
          Length = 621

 Score =  135 bits (340), Expect = 3e-30
 Identities = 63/95 (66%), Positives = 81/95 (85%), Gaps = 1/95 (1%)
 Frame = +1

Query: 124 LLKLGPFVDSKHPEISKGTIERSFDDIFHSDILRRVQDYAEYMGYATRVVLVPSLQDAYH 303
           L+ LGPFVDS+HPEI KGT++ SFD+IF  +ILRR+QDY EYMG   +V++VPS +DA H
Sbjct: 391 LILLGPFVDSEHPEIKKGTVDGSFDEIFRQEILRRLQDYVEYMGSDAQVLIVPSTRDANH 450

Query: 304 DFVFPQPAFDIH-SDLKNQITCLTNPGLFDANKVK 405
           DFVFPQPAFDIH S+L++QI  LTNPG+F+AN+V+
Sbjct: 451 DFVFPQPAFDIHRSNLQHQIRSLTNPGIFEANQVR 485


>ref|XP_002438164.1| hypothetical protein SORBIDRAFT_10g009040 [Sorghum bicolor]
           gi|241916387|gb|EER89531.1| hypothetical protein
           SORBIDRAFT_10g009040 [Sorghum bicolor]
          Length = 626

 Score =  129 bits (325), Expect = 2e-28
 Identities = 54/95 (56%), Positives = 79/95 (83%), Gaps = 2/95 (2%)
 Frame = +1

Query: 124 LLKLGPFVDSKHPEISKGTIERSFDDIFHSDILRRVQDYAEYMGYATRVVLVPSLQDAYH 303
           L+ +GPF+DS HP+I KGT+++SF DIFH +ILR++QD+ +Y+G   RV+L+PS++DA+H
Sbjct: 397 LILMGPFIDSDHPDIKKGTVDQSFHDIFHFEILRKIQDFTQYLGNTVRVILIPSVRDAHH 456

Query: 304 DFVFPQPAFDIH--SDLKNQITCLTNPGLFDANKV 402
           DFVFPQPAFD++   D+ +QITCL NP LF +N++
Sbjct: 457 DFVFPQPAFDLNFPEDITHQITCLANPCLFSSNEI 491


>dbj|BAK05466.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 625

 Score =  129 bits (324), Expect = 2e-28
 Identities = 56/96 (58%), Positives = 78/96 (81%), Gaps = 2/96 (2%)
 Frame = +1

Query: 124 LLKLGPFVDSKHPEISKGTIERSFDDIFHSDILRRVQDYAEYMGYATRVVLVPSLQDAYH 303
           L+ +GPF+DS HPEI KGT ++SF DIF  +ILR++QD+ +Y+GY  RV+LVPS++DA+H
Sbjct: 396 LILMGPFIDSDHPEIKKGTSDQSFHDIFRFEILRKLQDFTQYLGYNVRVILVPSVRDAHH 455

Query: 304 DFVFPQPAFDIH--SDLKNQITCLTNPGLFDANKVK 405
           D VFPQPAFD+H   D+  QITCL+NP LF +N+++
Sbjct: 456 DTVFPQPAFDLHLPEDITQQITCLSNPSLFSSNEIQ 491


>ref|NP_176930.2| DNA polymerase alpha 2 [Arabidopsis thaliana]
           gi|332196552|gb|AEE34673.1| DNA polymerase alpha 2
           [Arabidopsis thaliana]
          Length = 620

 Score =  129 bits (323), Expect = 3e-28
 Identities = 58/95 (61%), Positives = 79/95 (83%), Gaps = 1/95 (1%)
 Frame = +1

Query: 124 LLKLGPFVDSKHPEISKGTIERSFDDIFHSDILRRVQDYAEYMGYATRVVLVPSLQDAYH 303
           L+ LGPFVDS+HPEI KG ++ +F++IF  ++LR++QDY E+MG   RVVLVPS++DA H
Sbjct: 394 LVLLGPFVDSEHPEIKKGAVDATFNEIFQVEVLRKLQDYVEFMGSEVRVVLVPSIRDANH 453

Query: 304 DFVFPQPAFDIH-SDLKNQITCLTNPGLFDANKVK 405
           DF+FPQP FDIH  DL++Q+T L+NPG F+AN+VK
Sbjct: 454 DFIFPQPPFDIHIPDLEHQMTSLSNPGTFEANQVK 488