BLASTX nr result
ID: Coptis21_contig00000475
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00000475 (605 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AEQ75492.1| ubiquitin extension protein [Rosa multiflora] 256 2e-66 ref|XP_002266750.1| PREDICTED: ubiquitin-40S ribosomal protein S... 256 3e-66 ref|XP_002297752.1| predicted protein [Populus trichocarpa] gi|2... 255 4e-66 gb|ABN72579.1| ubiquitin extension protein [Hevea brasiliensis] 255 5e-66 gb|AAZ83341.1| ubiquitin extension protein [Gossypium hirsutum] 254 1e-65 >gb|AEQ75492.1| ubiquitin extension protein [Rosa multiflora] Length = 156 Score = 256 bits (655), Expect = 2e-66 Identities = 130/152 (85%), Positives = 130/152 (85%) Frame = -1 Query: 605 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 426 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE Sbjct: 5 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 64 Query: 425 STLHLVLRLRGGAXXXXXXXXXXXXXXXXXXXXXKLAVLQFYKVDDSGKVQKLRKECPNQ 246 STLHLVLRLRGGA KLAVLQFYKVDDSGKVQKLRKECPN Sbjct: 65 STLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKVDDSGKVQKLRKECPNA 124 Query: 245 ECGAGTFMANHFDRHYCGKCGLTYVYQKAGGD 150 ECGAGTFMANHFDRHYCGKCGLTYVYQKAGGD Sbjct: 125 ECGAGTFMANHFDRHYCGKCGLTYVYQKAGGD 156 >ref|XP_002266750.1| PREDICTED: ubiquitin-40S ribosomal protein S27a isoform 1 [Vitis vinifera] gi|359491770|ref|XP_003634320.1| PREDICTED: ubiquitin-40S ribosomal protein S27a isoform 2 [Vitis vinifera] gi|147836392|emb|CAN75420.1| hypothetical protein VITISV_037877 [Vitis vinifera] Length = 156 Score = 256 bits (653), Expect = 3e-66 Identities = 129/152 (84%), Positives = 130/152 (85%) Frame = -1 Query: 605 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 426 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE Sbjct: 5 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 64 Query: 425 STLHLVLRLRGGAXXXXXXXXXXXXXXXXXXXXXKLAVLQFYKVDDSGKVQKLRKECPNQ 246 STLHLVLRLRGGA KLAVLQFYKVDDSGKVQ+LRKECPN Sbjct: 65 STLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDDSGKVQRLRKECPNS 124 Query: 245 ECGAGTFMANHFDRHYCGKCGLTYVYQKAGGD 150 ECGAGTFMANHFDRHYCGKCGLTYVYQKAGGD Sbjct: 125 ECGAGTFMANHFDRHYCGKCGLTYVYQKAGGD 156 >ref|XP_002297752.1| predicted protein [Populus trichocarpa] gi|224064701|ref|XP_002301539.1| predicted protein [Populus trichocarpa] gi|224114615|ref|XP_002332324.1| predicted protein [Populus trichocarpa] gi|224136388|ref|XP_002322317.1| predicted protein [Populus trichocarpa] gi|255548313|ref|XP_002515213.1| ubiquitin, putative [Ricinus communis] gi|1771780|emb|CAA71132.1| ubiquitin extension protein [Solanum tuberosum] gi|76573361|gb|ABA46785.1| ubiquitin extension protein-like protein [Solanum tuberosum] gi|118481233|gb|ABK92566.1| unknown [Populus trichocarpa] gi|118484030|gb|ABK93901.1| unknown [Populus trichocarpa] gi|118484734|gb|ABK94236.1| unknown [Populus trichocarpa] gi|118484740|gb|ABK94239.1| unknown [Populus trichocarpa] gi|118484834|gb|ABK94284.1| unknown [Populus trichocarpa] gi|196166892|gb|ACG70965.1| ubiquitin extensive-like protein [Ziziphus jujuba] gi|222832571|gb|EEE71048.1| predicted protein [Populus trichocarpa] gi|222843265|gb|EEE80812.1| predicted protein [Populus trichocarpa] gi|222845010|gb|EEE82557.1| predicted protein [Populus trichocarpa] gi|222869313|gb|EEF06444.1| predicted protein [Populus trichocarpa] gi|223545693|gb|EEF47197.1| ubiquitin, putative [Ricinus communis] Length = 156 Score = 255 bits (652), Expect = 4e-66 Identities = 129/152 (84%), Positives = 130/152 (85%) Frame = -1 Query: 605 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 426 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE Sbjct: 5 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 64 Query: 425 STLHLVLRLRGGAXXXXXXXXXXXXXXXXXXXXXKLAVLQFYKVDDSGKVQKLRKECPNQ 246 STLHLVLRLRGGA KLAVLQFYKVDDSGKVQ+LRKECPN Sbjct: 65 STLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDDSGKVQRLRKECPNA 124 Query: 245 ECGAGTFMANHFDRHYCGKCGLTYVYQKAGGD 150 ECGAGTFMANHFDRHYCGKCGLTYVYQKAGGD Sbjct: 125 ECGAGTFMANHFDRHYCGKCGLTYVYQKAGGD 156 >gb|ABN72579.1| ubiquitin extension protein [Hevea brasiliensis] Length = 156 Score = 255 bits (651), Expect = 5e-66 Identities = 128/152 (84%), Positives = 130/152 (85%) Frame = -1 Query: 605 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 426 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE Sbjct: 5 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 64 Query: 425 STLHLVLRLRGGAXXXXXXXXXXXXXXXXXXXXXKLAVLQFYKVDDSGKVQKLRKECPNQ 246 STLHLVLRLRGGA KLA+LQFYKVDDSGKVQ+LRKECPN Sbjct: 65 STLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAILQFYKVDDSGKVQRLRKECPNA 124 Query: 245 ECGAGTFMANHFDRHYCGKCGLTYVYQKAGGD 150 ECGAGTFMANHFDRHYCGKCGLTYVYQKAGGD Sbjct: 125 ECGAGTFMANHFDRHYCGKCGLTYVYQKAGGD 156 >gb|AAZ83341.1| ubiquitin extension protein [Gossypium hirsutum] Length = 156 Score = 254 bits (648), Expect = 1e-65 Identities = 128/152 (84%), Positives = 130/152 (85%) Frame = -1 Query: 605 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 426 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE Sbjct: 5 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 64 Query: 425 STLHLVLRLRGGAXXXXXXXXXXXXXXXXXXXXXKLAVLQFYKVDDSGKVQKLRKECPNQ 246 STLHLVLRLRGGA KLAVLQFYKVD+SGKVQ+LRKECPN Sbjct: 65 STLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDESGKVQRLRKECPNA 124 Query: 245 ECGAGTFMANHFDRHYCGKCGLTYVYQKAGGD 150 ECGAGTFMANHFDRHYCGKCGLTYVYQKAGGD Sbjct: 125 ECGAGTFMANHFDRHYCGKCGLTYVYQKAGGD 156