BLASTX nr result

ID: Coptis21_contig00000470 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000470
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK36072.1| unknown [Lotus japonicus]                              204   5e-51
ref|XP_002305510.1| predicted protein [Populus trichocarpa] gi|1...   202   3e-50
gb|AFK43299.1| unknown [Medicago truncatula]                          201   4e-50
ref|XP_002277796.1| PREDICTED: actin-depolymerizing factor 5 [Vi...   200   1e-49
ref|NP_001236835.1| uncharacterized protein LOC100526982 [Glycin...   199   1e-49

>gb|AFK36072.1| unknown [Lotus japonicus]
          Length = 173

 Score =  204 bits (520), Expect = 5e-51
 Identities = 97/108 (89%), Positives = 101/108 (93%)
 Frame = +1

Query: 79  FTLQVASTMAMAFKMATTGMWVTDECKNSFMEMKWKKVHRFIVFKIDEESKLVTVDKVGG 258
           F+L    TMAMAFKMATTGMWVTDECKNSFMEMKWKKVHR+IVFKIDE S+LVTVDKVGG
Sbjct: 23  FSLLHQITMAMAFKMATTGMWVTDECKNSFMEMKWKKVHRYIVFKIDERSRLVTVDKVGG 82

Query: 259 PGEGYDDLAASLPGDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASR 402
           PGE Y DLAASLPGDDCRYAVFDFDFVTVDNCRKSKIFFIAW+PTASR
Sbjct: 83  PGESYADLAASLPGDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTASR 130


>ref|XP_002305510.1| predicted protein [Populus trichocarpa] gi|118484861|gb|ABK94297.1|
           unknown [Populus trichocarpa]
           gi|222848474|gb|EEE86021.1| predicted protein [Populus
           trichocarpa]
          Length = 143

 Score =  202 bits (513), Expect = 3e-50
 Identities = 94/100 (94%), Positives = 98/100 (98%)
 Frame = +1

Query: 103 MAMAFKMATTGMWVTDECKNSFMEMKWKKVHRFIVFKIDEESKLVTVDKVGGPGEGYDDL 282
           MAMAFKMATTGMWVTDECKNSF EMKW+KVHR+IVFKIDE+S+LVTVDKVGGPGEGYDDL
Sbjct: 1   MAMAFKMATTGMWVTDECKNSFHEMKWRKVHRYIVFKIDEKSRLVTVDKVGGPGEGYDDL 60

Query: 283 AASLPGDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASR 402
           AASLP DDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASR
Sbjct: 61  AASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASR 100


>gb|AFK43299.1| unknown [Medicago truncatula]
          Length = 173

 Score =  201 bits (512), Expect = 4e-50
 Identities = 93/100 (93%), Positives = 98/100 (98%)
 Frame = +1

Query: 103 MAMAFKMATTGMWVTDECKNSFMEMKWKKVHRFIVFKIDEESKLVTVDKVGGPGEGYDDL 282
           MAMAFKMATTGMWVTDECKNSFMEMKWKKVHR+IVFKIDE+++LVTVDKVGGPGE YDDL
Sbjct: 1   MAMAFKMATTGMWVTDECKNSFMEMKWKKVHRYIVFKIDEKTRLVTVDKVGGPGENYDDL 60

Query: 283 AASLPGDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASR 402
           AASLP DDCRYAVFDFDFVTVDNCRKSKIFFIAW+PTASR
Sbjct: 61  AASLPNDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTASR 100


>ref|XP_002277796.1| PREDICTED: actin-depolymerizing factor 5 [Vitis vinifera]
           gi|297744627|emb|CBI37889.3| unnamed protein product
           [Vitis vinifera]
          Length = 143

 Score =  200 bits (508), Expect = 1e-49
 Identities = 94/100 (94%), Positives = 97/100 (97%)
 Frame = +1

Query: 103 MAMAFKMATTGMWVTDECKNSFMEMKWKKVHRFIVFKIDEESKLVTVDKVGGPGEGYDDL 282
           MAMAFKMATTGMWVTDECKNSFMEMKWKKVHR+IVFKIDE SKLVTVDKVGGPGEGYD+L
Sbjct: 1   MAMAFKMATTGMWVTDECKNSFMEMKWKKVHRYIVFKIDEGSKLVTVDKVGGPGEGYDEL 60

Query: 283 AASLPGDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASR 402
           AASLP DDCRYAVFDFDFVT DNCRKSKIFFIAW+PTASR
Sbjct: 61  AASLPTDDCRYAVFDFDFVTNDNCRKSKIFFIAWSPTASR 100


>ref|NP_001236835.1| uncharacterized protein LOC100526982 [Glycine max]
           gi|255631302|gb|ACU16018.1| unknown [Glycine max]
          Length = 143

 Score =  199 bits (507), Expect = 1e-49
 Identities = 93/100 (93%), Positives = 97/100 (97%)
 Frame = +1

Query: 103 MAMAFKMATTGMWVTDECKNSFMEMKWKKVHRFIVFKIDEESKLVTVDKVGGPGEGYDDL 282
           MAMAFKMATTGMWVTDECKNSFMEMKWKKVHR+IVFKIDE+S+LVTVDKVGGPGE Y DL
Sbjct: 1   MAMAFKMATTGMWVTDECKNSFMEMKWKKVHRYIVFKIDEKSRLVTVDKVGGPGESYGDL 60

Query: 283 AASLPGDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASR 402
           AASLP DDCRYAVFDFDFVTVDNCRKSKIFFIAW+PTASR
Sbjct: 61  AASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTASR 100


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