BLASTX nr result

ID: Coptis21_contig00000463 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000463
         (729 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514207.1| conserved hypothetical protein [Ricinus comm...    67   4e-09
gb|ADR71293.1| hypothetical protein 17 [Hevea brasiliensis]            60   4e-07
ref|XP_002321754.1| predicted protein [Populus trichocarpa] gi|1...    56   9e-06

>ref|XP_002514207.1| conserved hypothetical protein [Ricinus communis]
           gi|223546663|gb|EEF48161.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 78

 Score = 67.0 bits (162), Expect = 4e-09
 Identities = 35/74 (47%), Positives = 44/74 (59%)
 Frame = +1

Query: 226 MKDSGKSGKVNGKYGQQDGRKDRRSAXXXXXXXXXXXXXXXFTWAGIGFSHVEIGLEKKD 405
           MK++GKS K +    + D R+DR+SA               FTWAG G+S  EIG + KD
Sbjct: 1   MKNTGKSSKSSTANSKSDARRDRKSATGMSGSPKKGGHGGKFTWAGDGYSPAEIGYQ-KD 59

Query: 406 ILDNKDPNFEDEEE 447
           +LD KDPNFED EE
Sbjct: 60  VLDAKDPNFEDPEE 73


>gb|ADR71293.1| hypothetical protein 17 [Hevea brasiliensis]
          Length = 76

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 35/76 (46%), Positives = 43/76 (56%)
 Frame = +1

Query: 226 MKDSGKSGKVNGKYGQQDGRKDRRSAXXXXXXXXXXXXXXXFTWAGIGFSHVEIGLEKKD 405
           MK++ KS K N    + D RKDR+SA               FTWAG G+S  EIGL+  +
Sbjct: 1   MKNTVKSSKTNAN-SKSDVRKDRKSATGMSGSPKKGGHGGKFTWAGDGYSQAEIGLQ-GE 58

Query: 406 ILDNKDPNFEDEEEKE 453
            +D KDPNFED EE E
Sbjct: 59  AVDVKDPNFEDPEETE 74


>ref|XP_002321754.1| predicted protein [Populus trichocarpa] gi|118488859|gb|ABK96239.1|
           unknown [Populus trichocarpa x Populus deltoides]
           gi|222868750|gb|EEF05881.1| predicted protein [Populus
           trichocarpa]
          Length = 75

 Score = 55.8 bits (133), Expect = 9e-06
 Identities = 32/74 (43%), Positives = 39/74 (52%)
 Frame = +1

Query: 226 MKDSGKSGKVNGKYGQQDGRKDRRSAXXXXXXXXXXXXXXXFTWAGIGFSHVEIGLEKKD 405
           MK + KS   N    + D RKDR+S                FTW G G+S+ EIG E K+
Sbjct: 1   MKRNSKSSSNNNP--KSDARKDRKSGTGMSGSPKKGGHGGKFTWVGDGYSNAEIGFE-KE 57

Query: 406 ILDNKDPNFEDEEE 447
            +D KDPNFED EE
Sbjct: 58  AVDVKDPNFEDPEE 71


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