BLASTX nr result
ID: Coptis21_contig00000458
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00000458 (1109 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002271632.1| PREDICTED: 40S ribosomal protein S6 isoform ... 410 e-112 ref|XP_002285752.1| PREDICTED: 40S ribosomal protein S6 [Vitis v... 405 e-111 ref|XP_002273865.1| PREDICTED: 40S ribosomal protein S6 isoform ... 405 e-110 sp|Q9M3V8.1|RS6_ASPOF RecName: Full=40S ribosomal protein S6 gi|... 404 e-110 gb|ACF06626.1| S6 ribosomal protein [Elaeis guineensis] 402 e-110 >ref|XP_002271632.1| PREDICTED: 40S ribosomal protein S6 isoform 1 [Vitis vinifera] gi|296087487|emb|CBI34076.3| unnamed protein product [Vitis vinifera] Length = 249 Score = 410 bits (1054), Expect = e-112 Identities = 208/238 (87%), Positives = 215/238 (90%) Frame = -3 Query: 1044 MKFNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEVNGDALGEEFRGYVFKIMGGCDKQG 865 MKFNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEVNGDALGEEF+GYVFKIMGGCDKQG Sbjct: 1 MKFNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEVNGDALGEEFKGYVFKIMGGCDKQG 60 Query: 864 FPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXGCIVSQDLSVLNLVIVKKGE 685 FPMKQGVLTPGRV LLLHRGTPCF GCIVSQDLSVLNLVIVKKGE Sbjct: 61 FPMKQGVLTPGRVSLLLHRGTPCFRGYGRRNGERRRKAVRGCIVSQDLSVLNLVIVKKGE 120 Query: 684 DDLPGLTDTEKPRMRGPKRASNIRRLFNLSKEDDVRKYVNTYRRNFTNKAGKKCSKAPKI 505 DLPGLTDTEKPRMRGPKRAS IR+LFNLSKEDDVRKYVNTYRR FT K+GKKCSKAPKI Sbjct: 121 SDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKCSKAPKI 180 Query: 504 QRLVTPLTLQRKRARIAEKKNRIAKAKSEAADYLKLLATRMKEQKERRSESLAKKRSR 331 QRLVTPLTLQRKRARIAEKK RIAKAKSEAA+Y KLLATR+KEQ+ERRSESLAK+RSR Sbjct: 181 QRLVTPLTLQRKRARIAEKKKRIAKAKSEAAEYQKLLATRLKEQRERRSESLAKRRSR 238 >ref|XP_002285752.1| PREDICTED: 40S ribosomal protein S6 [Vitis vinifera] gi|302141988|emb|CBI19191.3| unnamed protein product [Vitis vinifera] Length = 249 Score = 405 bits (1041), Expect = e-111 Identities = 205/238 (86%), Positives = 215/238 (90%) Frame = -3 Query: 1044 MKFNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEVNGDALGEEFRGYVFKIMGGCDKQG 865 MKFNIANPTTGCQKKLEIDDDQKLRAF+DKRISQEV+GDALGEEF GYVFKIMGGCDKQG Sbjct: 1 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFNGYVFKIMGGCDKQG 60 Query: 864 FPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXGCIVSQDLSVLNLVIVKKGE 685 FPMKQGVLTPGRV LLLHRGTPCF GCIVSQDLSVLNLVIVKKGE Sbjct: 61 FPMKQGVLTPGRVSLLLHRGTPCFRGYGRRNGERRRKAVRGCIVSQDLSVLNLVIVKKGE 120 Query: 684 DDLPGLTDTEKPRMRGPKRASNIRRLFNLSKEDDVRKYVNTYRRNFTNKAGKKCSKAPKI 505 DLPGLTDTEKPRMRGPKRAS IR+LFNLSK+DDVRKYVNTYRR+FT K+GKKCSKAPKI Sbjct: 121 SDLPGLTDTEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRSFTTKSGKKCSKAPKI 180 Query: 504 QRLVTPLTLQRKRARIAEKKNRIAKAKSEAADYLKLLATRMKEQKERRSESLAKKRSR 331 QRLVTPLTLQRKRARIAEKK RIAKAKSEAA+Y KLLATR+KEQ+ERRSESLAK+RSR Sbjct: 181 QRLVTPLTLQRKRARIAEKKKRIAKAKSEAAEYQKLLATRLKEQRERRSESLAKRRSR 238 >ref|XP_002273865.1| PREDICTED: 40S ribosomal protein S6 isoform 1 [Vitis vinifera] gi|297741825|emb|CBI33138.3| unnamed protein product [Vitis vinifera] Length = 249 Score = 405 bits (1040), Expect = e-110 Identities = 205/238 (86%), Positives = 215/238 (90%) Frame = -3 Query: 1044 MKFNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEVNGDALGEEFRGYVFKIMGGCDKQG 865 MKFNIANPTTGCQKKLEIDDDQKLRAF+DKRISQEV+GDALGEEF+GYVFKIMGGCDKQG Sbjct: 1 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG 60 Query: 864 FPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXGCIVSQDLSVLNLVIVKKGE 685 FPMKQGVLTPGRV+LLLHRGTPCF GCIVSQDLSVLNLVIVKKGE Sbjct: 61 FPMKQGVLTPGRVQLLLHRGTPCFRGYGRRNGERRRKAVRGCIVSQDLSVLNLVIVKKGE 120 Query: 684 DDLPGLTDTEKPRMRGPKRASNIRRLFNLSKEDDVRKYVNTYRRNFTNKAGKKCSKAPKI 505 +LPGLTD EKPRMRGPKRAS IR+LFNLSKEDDVRKYVNTYRR FT K+GKKCSKAPKI Sbjct: 121 GELPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKCSKAPKI 180 Query: 504 QRLVTPLTLQRKRARIAEKKNRIAKAKSEAADYLKLLATRMKEQKERRSESLAKKRSR 331 QRLVTPLTLQRKRARIAEKK RIAKAKSEAA+Y KLLATR+KEQ+ERRSESLAKKRSR Sbjct: 181 QRLVTPLTLQRKRARIAEKKKRIAKAKSEAAEYQKLLATRLKEQRERRSESLAKKRSR 238 >sp|Q9M3V8.1|RS6_ASPOF RecName: Full=40S ribosomal protein S6 gi|7649387|emb|CAB89081.1| S6 ribosomal protein [Asparagus officinalis] Length = 251 Score = 404 bits (1038), Expect = e-110 Identities = 204/238 (85%), Positives = 214/238 (89%) Frame = -3 Query: 1044 MKFNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEVNGDALGEEFRGYVFKIMGGCDKQG 865 MKFNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEV+GDALGEEF+GYVFKIMGGCDKQG Sbjct: 1 MKFNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG 60 Query: 864 FPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXGCIVSQDLSVLNLVIVKKGE 685 FPMKQGVLTPGRVRLLLHRGTPCF GCIVS DLSVLNLVIVKKGE Sbjct: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120 Query: 684 DDLPGLTDTEKPRMRGPKRASNIRRLFNLSKEDDVRKYVNTYRRNFTNKAGKKCSKAPKI 505 +DLPGLTD EKPRMRGPKRAS IR+LFNLSKEDDVRKYVNTYRR FTNK GK CSKAPKI Sbjct: 121 NDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTNKKGKTCSKAPKI 180 Query: 504 QRLVTPLTLQRKRARIAEKKNRIAKAKSEAADYLKLLATRMKEQKERRSESLAKKRSR 331 QRLVTPLTLQRKRARIAEKK R+AKAKSEAA+Y KLLA+R+KEQ++RRSESLAKKRSR Sbjct: 181 QRLVTPLTLQRKRARIAEKKKRVAKAKSEAAEYQKLLASRLKEQRDRRSESLAKKRSR 238 >gb|ACF06626.1| S6 ribosomal protein [Elaeis guineensis] Length = 249 Score = 402 bits (1034), Expect = e-110 Identities = 203/238 (85%), Positives = 215/238 (90%) Frame = -3 Query: 1044 MKFNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEVNGDALGEEFRGYVFKIMGGCDKQG 865 MKFNIANPTTGCQKKLEIDDDQKLRAF+DKRISQEV+GDALGEEF+GYVFKIMGGCDKQG Sbjct: 1 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG 60 Query: 864 FPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXGCIVSQDLSVLNLVIVKKGE 685 FPMKQGVLTPGRVRLLLHRGTPCF GCIVS DLSVLNLVIVKKGE Sbjct: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120 Query: 684 DDLPGLTDTEKPRMRGPKRASNIRRLFNLSKEDDVRKYVNTYRRNFTNKAGKKCSKAPKI 505 +DLPGLTD EKPRMRGPKRAS IR+LFNLSKEDDVRKYVNTYRR FT K+GKKCSKAPKI Sbjct: 121 NDLPGLTDIEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKCSKAPKI 180 Query: 504 QRLVTPLTLQRKRARIAEKKNRIAKAKSEAADYLKLLATRMKEQKERRSESLAKKRSR 331 QRLVTPLTLQRKRARIAEKK RIAKAK+EAA+Y KLLATR+KEQ+ERRSESLAK+RS+ Sbjct: 181 QRLVTPLTLQRKRARIAEKKKRIAKAKAEAAEYQKLLATRLKEQRERRSESLAKRRSK 238