BLASTX nr result

ID: Coptis21_contig00000453 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000453
         (1114 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272904.1| PREDICTED: uncharacterized protein LOC100242...   133   7e-29
ref|XP_002315561.1| predicted protein [Populus trichocarpa] gi|2...   131   3e-28
ref|XP_002283998.1| PREDICTED: uncharacterized protein LOC100245...   119   1e-24
ref|XP_002330342.1| predicted protein [Populus trichocarpa] gi|2...   115   2e-23
ref|XP_002516905.1| conserved hypothetical protein [Ricinus comm...   112   1e-22

>ref|XP_002272904.1| PREDICTED: uncharacterized protein LOC100242678 [Vitis vinifera]
          Length = 291

 Score =  133 bits (335), Expect = 7e-29
 Identities = 89/193 (46%), Positives = 115/193 (59%), Gaps = 19/193 (9%)
 Frame = -1

Query: 859 MDQMPLDFTVLSAKDLEKVRSISKTKAYVVVKISSDLRTEQKTTPVDLDGGENPTWNCNM 680
           M+   L+  V+SAKDL+ V  ISK   YVVV I+ D R++QKT PVD DGG NPTWN  M
Sbjct: 1   MEYRTLEINVISAKDLKDVNLISKMDVYVVVSINGDSRSKQKT-PVDRDGGTNPTWNFPM 59

Query: 679 EFTIDEGSI------IVFQLCCKRSLGDRDIGEVNVPIKNLLHNLGNGK--QVVSYPV-F 527
           +FT+DE +       + F+L C+R+LGD+DIGEVNVPIK LL   G  K  Q VSY V  
Sbjct: 60  KFTVDESAAQQNRLTLSFKLRCERTLGDKDIGEVNVPIKELLDPAGESKPIQFVSYQVRK 119

Query: 526 TKGESKGKLSFSYEFGQKVV--------RPATAYPPHKT--GNVNEPAGTSTPAPIPQPA 377
             G+ KG+L+ SY+FG+K +         P  AYPP  +     +EP  T+ PA +   A
Sbjct: 120 PSGKPKGELNLSYKFGEKSMSQSATKAQEPVMAYPPAASVVPKADEPV-TAYPAGV---A 175

Query: 376 KSSSRKRTLQAGP 338
            SSS    + A P
Sbjct: 176 ASSSAYPPVGAYP 188


>ref|XP_002315561.1| predicted protein [Populus trichocarpa] gi|222864601|gb|EEF01732.1|
           predicted protein [Populus trichocarpa]
          Length = 289

 Score =  131 bits (330), Expect = 3e-28
 Identities = 82/170 (48%), Positives = 109/170 (64%), Gaps = 15/170 (8%)
 Frame = -1

Query: 859 MDQMPLDFTVLSAKDLEKVRSISKTKAYVVVKIS---SDLRTEQKT-TPVDLDGGENPTW 692
           MDQ  L+  V+SA+DL+ V  ISK   Y VV IS   S  + +QKT TPVD DGG+NPTW
Sbjct: 1   MDQRTLEINVISARDLKDVNYISKMDVYAVVSISGVDSKQQPKQKTKTPVDRDGGKNPTW 60

Query: 691 NCNMEFTIDEGSI------IVFQLCCKRSLGDRDIGEVNVPIKNLLHNLGNGKQV--VSY 536
           N  ++FTI E S+      +VF+L C+R+LGD+DIGEVNVPIK LL + G+GK +  VSY
Sbjct: 61  NFPIKFTIPETSLAENHLSLVFKLKCERALGDKDIGEVNVPIKELLDSAGDGKSMKFVSY 120

Query: 535 PV-FTKGESKGKLSFSYEFG--QKVVRPATAYPPHKTGNVNEPAGTSTPA 395
            V    G+ KG+++FS++FG  +KVV P  +    K  N N     + PA
Sbjct: 121 QVRKPSGKPKGEINFSFKFGEIEKVVVPEASSSAAKATNSNSQPVAAYPA 170


>ref|XP_002283998.1| PREDICTED: uncharacterized protein LOC100245905 [Vitis vinifera]
           gi|147811137|emb|CAN76879.1| hypothetical protein
           VITISV_036709 [Vitis vinifera]
           gi|296089679|emb|CBI39498.3| unnamed protein product
           [Vitis vinifera]
          Length = 276

 Score =  119 bits (299), Expect = 1e-24
 Identities = 73/145 (50%), Positives = 91/145 (62%), Gaps = 9/145 (6%)
 Frame = -1

Query: 859 MDQMPLDFTVLSAKDLEKVRSISKTKAYVVVKISSDLRTEQKTTPVDLDGGENPTWNCNM 680
           M+   LD  VL AKDL+ V   SK   YVVV IS D RT QK TPVD DGG +P WN +M
Sbjct: 1   MEYRALDIKVLEAKDLKDVNLFSKMDVYVVVTISGDPRTVQK-TPVDKDGGTSPKWNFSM 59

Query: 679 EFTIDEGSI------IVFQLCCKRSLGDRDIGEVNVPIKNLLHNLGNGK--QVVSYPVFT 524
           +FT+D+         + F L   R+LGDRDIGEV VP+K LL N  + K  +VVS+ V  
Sbjct: 60  KFTVDDALAHQNRIGLNFTLRSNRALGDRDIGEVYVPLKELLDNASDDKVDRVVSFQVRK 119

Query: 523 K-GESKGKLSFSYEFGQKVVRPATA 452
           + G+ +G LSFSY+FG+K   PA A
Sbjct: 120 QSGKPQGTLSFSYKFGEKFSAPAPA 144


>ref|XP_002330342.1| predicted protein [Populus trichocarpa]
           gi|224123120|ref|XP_002330343.1| predicted protein
           [Populus trichocarpa] gi|224146536|ref|XP_002336315.1|
           predicted protein [Populus trichocarpa]
           gi|222834629|gb|EEE73092.1| predicted protein [Populus
           trichocarpa] gi|222871546|gb|EEF08677.1| predicted
           protein [Populus trichocarpa]
           gi|222871547|gb|EEF08678.1| predicted protein [Populus
           trichocarpa]
          Length = 300

 Score =  115 bits (288), Expect = 2e-23
 Identities = 74/178 (41%), Positives = 107/178 (60%), Gaps = 17/178 (9%)
 Frame = -1

Query: 859 MDQMPLDFTVLSAKDLEKVRSISKTKAYVVVKISSD---LRTEQKT-TPVDLDGGENPTW 692
           M +  L+  V+SA+ L+ V  ISK   Y VV IS D    + +QKT TPVD  GG+NPTW
Sbjct: 1   MGERTLEINVISARGLKDVNYISKMDVYAVVSISGDDSKQKPKQKTKTPVDRAGGKNPTW 60

Query: 691 NCNMEFTIDEGSI------IVFQLCCKRSLGDRDIGEVNVPIKNLLHNLGNGKQV--VSY 536
           N  ++FTI +  +      +V  L C+R+LGD+D+GEVNVP+K LL + G+GK +  VSY
Sbjct: 61  NFPIKFTIPQTPLAENRLNLVCNLKCERALGDKDVGEVNVPVKELLDSAGDGKSMKFVSY 120

Query: 535 PV-FTKGESKGKLSFSYEFG--QKVVRP--ATAYPPHKTGNVNEPAGTSTPAPIPQPA 377
            V    G+ KG++SFS++F   +KVV P  +TA     T + ++P       P+  P+
Sbjct: 121 QVRKPSGKPKGEVSFSFKFSGIEKVVVPEVSTAAAAKATNSSSQPVTAYAAVPVVGPS 178


>ref|XP_002516905.1| conserved hypothetical protein [Ricinus communis]
           gi|223543993|gb|EEF45519.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 283

 Score =  112 bits (281), Expect = 1e-22
 Identities = 72/162 (44%), Positives = 97/162 (59%), Gaps = 24/162 (14%)
 Frame = -1

Query: 859 MDQMPLDFTVLSAKDLEKVRSISKTKAYVVVKISSDLRT-EQKT-TPVDLDGGENPTWNC 686
           M+Q  L+  ++SAKDL+ V   SK   Y V+ IS D +  +QKT TPVD DGG NPTWN 
Sbjct: 1   MEQRTLEIKLISAKDLKDVNLFSKMDVYAVLSISGDSQQPKQKTKTPVDHDGGINPTWNF 60

Query: 685 NMEFTIDEGSI------IVFQLCCKRSLGDRDIGEVNVPIKNLLHNL---GNGKQVVSYP 533
             +F I E         +  +L C+R+LGD+D+GEV+VPIK LL ++   GN  Q V+Y 
Sbjct: 61  PAKFIIIETPAQQNRLNLDIKLRCERALGDKDVGEVHVPIKELLDSINGDGNSMQFVNYQ 120

Query: 532 V-FTKGESKGKLSFSYEFGQKVV------------RPATAYP 446
           V    G+SKG+LSFS++F  K+V            +P TAYP
Sbjct: 121 VRKPSGKSKGELSFSFKFSDKIVASGSEKASDKVDQPITAYP 162


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