BLASTX nr result

ID: Coptis21_contig00000447 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000447
         (1229 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315619.1| predicted protein [Populus trichocarpa] gi|2...   269   9e-70
ref|XP_002264828.1| PREDICTED: proteasome subunit beta type-5 [V...   268   2e-69
ref|XP_003526966.1| PREDICTED: proteasome subunit beta type-5-li...   267   4e-69
ref|XP_002312631.1| predicted protein [Populus trichocarpa] gi|2...   267   4e-69
gb|ACU23791.1| unknown [Glycine max]                                  266   1e-68

>ref|XP_002315619.1| predicted protein [Populus trichocarpa] gi|222864659|gb|EEF01790.1|
            predicted protein [Populus trichocarpa]
          Length = 274

 Score =  269 bits (688), Expect = 9e-70
 Identities = 131/137 (95%), Positives = 137/137 (100%)
 Frame = +1

Query: 817  APSFELPTSKNFDGFQKEAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVK 996
            AP+FELPT+K+FDGFQKEA+QMVKPAKGTTTLAFIFKEGV+VAADSRASMGGYISSQSVK
Sbjct: 31   APAFELPTTKDFDGFQKEAVQMVKPAKGTTTLAFIFKEGVIVAADSRASMGGYISSQSVK 90

Query: 997  KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRG 1176
            KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANIL+SYRG
Sbjct: 91   KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILFSYRG 150

Query: 1177 MGLSVGTMIAGWDETGP 1227
            MGLSVGTMIAGWDETGP
Sbjct: 151  MGLSVGTMIAGWDETGP 167


>ref|XP_002264828.1| PREDICTED: proteasome subunit beta type-5 [Vitis vinifera]
            gi|297738390|emb|CBI27591.3| unnamed protein product
            [Vitis vinifera]
          Length = 272

 Score =  268 bits (686), Expect = 2e-69
 Identities = 132/137 (96%), Positives = 135/137 (98%)
 Frame = +1

Query: 817  APSFELPTSKNFDGFQKEAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVK 996
            APSFELP + +FDGFQK+AIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVK
Sbjct: 28   APSFELPNTTDFDGFQKDAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVK 87

Query: 997  KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRG 1176
            KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRG
Sbjct: 88   KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRG 147

Query: 1177 MGLSVGTMIAGWDETGP 1227
            MGLSVGTMIAGWDETGP
Sbjct: 148  MGLSVGTMIAGWDETGP 164


>ref|XP_003526966.1| PREDICTED: proteasome subunit beta type-5-like [Glycine max]
          Length = 272

 Score =  267 bits (683), Expect = 4e-69
 Identities = 132/137 (96%), Positives = 134/137 (97%)
 Frame = +1

Query: 817  APSFELPTSKNFDGFQKEAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVK 996
            APSF+LP S +FDGF KEAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVK
Sbjct: 28   APSFDLPNSNDFDGFVKEAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVK 87

Query: 997  KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRG 1176
            KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRG
Sbjct: 88   KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRG 147

Query: 1177 MGLSVGTMIAGWDETGP 1227
            MGLSVGTMIAGWDETGP
Sbjct: 148  MGLSVGTMIAGWDETGP 164


>ref|XP_002312631.1| predicted protein [Populus trichocarpa] gi|222852451|gb|EEE89998.1|
            predicted protein [Populus trichocarpa]
          Length = 265

 Score =  267 bits (683), Expect = 4e-69
 Identities = 130/137 (94%), Positives = 136/137 (99%)
 Frame = +1

Query: 817  APSFELPTSKNFDGFQKEAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVK 996
            AP+FELPT+ +FDGFQKEA+QMVKPAKGTTTLAFIFK+GV+VAADSRASMGGYISSQSVK
Sbjct: 29   APAFELPTTTDFDGFQKEAVQMVKPAKGTTTLAFIFKDGVIVAADSRASMGGYISSQSVK 88

Query: 997  KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRG 1176
            KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRG
Sbjct: 89   KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRG 148

Query: 1177 MGLSVGTMIAGWDETGP 1227
            MGLSVGTMIAGWDETGP
Sbjct: 149  MGLSVGTMIAGWDETGP 165


>gb|ACU23791.1| unknown [Glycine max]
          Length = 272

 Score =  266 bits (679), Expect = 1e-68
 Identities = 131/137 (95%), Positives = 134/137 (97%)
 Frame = +1

Query: 817  APSFELPTSKNFDGFQKEAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVK 996
            APSF+LP S +FDGF KEAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVK
Sbjct: 28   APSFDLPNSNDFDGFVKEAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVK 87

Query: 997  KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRG 1176
            KIIEINPYMLGT+AGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRG
Sbjct: 88   KIIEINPYMLGTVAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRG 147

Query: 1177 MGLSVGTMIAGWDETGP 1227
            MGLSVGTMIAGWDETGP
Sbjct: 148  MGLSVGTMIAGWDETGP 164


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