BLASTX nr result
ID: Coptis21_contig00000429
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00000429
(1060 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002531084.1| GTP cyclohydrolase I, putative [Ricinus comm... 164 3e-56
ref|XP_003530850.1| PREDICTED: uncharacterized protein LOC100816... 169 3e-53
ref|XP_003548646.1| PREDICTED: uncharacterized protein LOC100780... 162 4e-53
ref|XP_002266199.1| PREDICTED: uncharacterized protein LOC100244... 164 2e-52
emb|CAN79046.1| hypothetical protein VITISV_035826 [Vitis vinifera] 164 2e-52
>ref|XP_002531084.1| GTP cyclohydrolase I, putative [Ricinus communis]
gi|223529330|gb|EEF31298.1| GTP cyclohydrolase I,
putative [Ricinus communis]
Length = 469
Score = 164 bits (416), Expect(2) = 3e-56
Identities = 90/184 (48%), Positives = 119/184 (64%), Gaps = 7/184 (3%)
Frame = +1
Query: 1 WCPSRSLDLLAINGHRNTWNPLSYKTSIISEPAPASMITAVATILHSLGENPSRKELVGT 180
WCPS+S I NP M++AV +IL S+GE+P RKELVGT
Sbjct: 251 WCPSQSSSSSKILTKIGLPNP--------------EMVSAVTSILTSIGEDPLRKELVGT 296
Query: 181 PRRFVQWLMNFKSSNLXXXKCRKQTNK-------DGVRPHSDRVVFRSELNLPIWSQCEH 339
P RFV+WLMNF ++NL N+ GV + +++ +SELNL WSQCEH
Sbjct: 297 PSRFVKWLMNFHNTNLEMKLNGFGCNRMDPLKANGGVSHNKEQL--QSELNLSFWSQCEH 354
Query: 340 HLLPFHGVVHIGYFRTEGIESKGRAIL*SIVHFHGWKLQVQERLTRQITETVSSVMEGNL 519
HLLPF+GVVHIGYF+ EG G+++L SIVHF+G+KLQVQERLTRQI ET SS++ GN+
Sbjct: 355 HLLPFYGVVHIGYFQAEGFNPIGKSLLQSIVHFYGFKLQVQERLTRQIAETASSILGGNV 414
Query: 520 VILL 531
++++
Sbjct: 415 MVVV 418
Score = 81.3 bits (199), Expect(2) = 3e-56
Identities = 36/55 (65%), Positives = 46/55 (83%)
Frame = +3
Query: 531 VVAIVEANHICMIPRGIEKLGSSTATIATLGRFSIDPSAKELFLQTVSDNTACGG 695
V+ +VEANH CMI RGIEK GS+TATIA LGRFS DPS++ +FLQ++ ++ ACGG
Sbjct: 414 VMVVVEANHTCMISRGIEKFGSNTATIAVLGRFSTDPSSRAMFLQSIPNSAACGG 468
>ref|XP_003530850.1| PREDICTED: uncharacterized protein LOC100816351 [Glycine max]
Length = 457
Score = 169 bits (427), Expect(2) = 3e-53
Identities = 88/181 (48%), Positives = 117/181 (64%), Gaps = 4/181 (2%)
Frame = +1
Query: 1 WCPSRSLDLLAINGHRNTWNPLSYKTSIISEPAPASMITAVATILHSLGENPSRKELVGT 180
WCPS+S LS K S P M+TAVA+I+ SLGE+P RKEL+GT
Sbjct: 240 WCPSQS--------------SLSAKVSSKIGPVNPVMVTAVASIIESLGEDPLRKELIGT 285
Query: 181 PRRFVQWLMNFKSSN----LXXXKCRKQTNKDGVRPHSDRVVFRSELNLPIWSQCEHHLL 348
P RFV+WLMNF++SN L C + + + SELN+P WSQCEHHLL
Sbjct: 286 PSRFVKWLMNFQNSNFDMKLNGFLCDGIDSLNANEEVNVNQKITSELNIPFWSQCEHHLL 345
Query: 349 PFHGVVHIGYFRTEGIESKGRAIL*SIVHFHGWKLQVQERLTRQITETVSSVMEGNLVIL 528
PFHGVVHIGY ++G G+ +L SIVHF+G+KLQVQERLTRQI ET++ ++ G+++++
Sbjct: 346 PFHGVVHIGYLMSDGFNPMGKLLLQSIVHFYGFKLQVQERLTRQIAETIAPLLGGDVIVV 405
Query: 529 L 531
+
Sbjct: 406 V 406
Score = 67.0 bits (162), Expect(2) = 3e-53
Identities = 31/54 (57%), Positives = 41/54 (75%)
Frame = +3
Query: 531 VVAIVEANHICMIPRGIEKLGSSTATIATLGRFSIDPSAKELFLQTVSDNTACG 692
V+ +VEA+H CMI RGIEK GSSTATIA LG FS +P+A+ FL+++ T+ G
Sbjct: 402 VIVVVEASHTCMISRGIEKFGSSTATIAVLGHFSTNPTARASFLESIPRPTSSG 455
>ref|XP_003548646.1| PREDICTED: uncharacterized protein LOC100780537 [Glycine max]
Length = 471
Score = 162 bits (411), Expect(2) = 4e-53
Identities = 90/183 (49%), Positives = 117/183 (63%), Gaps = 6/183 (3%)
Frame = +1
Query: 1 WCPSRSLDLLAINGHRNTWNPLSYKTSIISEPAPASMITAVATILHSLGENPSRKELVGT 180
WCPS + LS K S P +M+TAV++IL SLGE+ RKEL GT
Sbjct: 252 WCPSLTA--------------LSAKVSSKIVPVNPAMVTAVSSILDSLGEDSLRKELAGT 297
Query: 181 PRRFVQWLMNFKSSNLXXXKCRK------QTNKDGVRPHSDRVVFRSELNLPIWSQCEHH 342
P RFV+WL+NF+S ++ R N D +DR + SELNLP WSQCEHH
Sbjct: 298 PSRFVKWLLNFQSIDMDVKLNRSLCDGIDTLNLDREVNFNDRQI-HSELNLPFWSQCEHH 356
Query: 343 LLPFHGVVHIGYFRTEGIESKGRAIL*SIVHFHGWKLQVQERLTRQITETVSSVMEGNLV 522
+LPFHGVVHIGYF +EG G+++L S+VHF+G+KLQVQERLTRQI ET++ ++ G V
Sbjct: 357 ILPFHGVVHIGYFLSEGSNPIGKSLLQSVVHFYGFKLQVQERLTRQIAETIAPLLLGGHV 416
Query: 523 ILL 531
I++
Sbjct: 417 IVV 419
Score = 72.8 bits (177), Expect(2) = 4e-53
Identities = 35/55 (63%), Positives = 42/55 (76%)
Frame = +3
Query: 531 VVAIVEANHICMIPRGIEKLGSSTATIATLGRFSIDPSAKELFLQTVSDNTACGG 695
V+ +VEA+H CMI RGIEK GSSTATIA LGRFS D +A++ FLQ V+ T GG
Sbjct: 416 VIVVVEASHTCMISRGIEKFGSSTATIAVLGRFSTDLAARDAFLQCVASATTSGG 470
>ref|XP_002266199.1| PREDICTED: uncharacterized protein LOC100244016 [Vitis vinifera]
Length = 455
Score = 164 bits (416), Expect(2) = 2e-52
Identities = 90/181 (49%), Positives = 117/181 (64%), Gaps = 4/181 (2%)
Frame = +1
Query: 1 WCPSRSLDLLAINGHRNTWNPLSYKTSIISEPAPASMITAVATILHSLGENPSRKELVGT 180
WCPS+S L + K ++ + M AV +IL SLGE+PSRKELV T
Sbjct: 246 WCPSQSSSAL-----------IPCKIELVHQ-----MDAAVTSILKSLGEDPSRKELVRT 289
Query: 181 PRRFVQWLMNFKSSNLXXXK----CRKQTNKDGVRPHSDRVVFRSELNLPIWSQCEHHLL 348
P R+V+WLMNF+ +NL C K D P + +SELNL WS CEHHLL
Sbjct: 290 PNRYVRWLMNFEKANLELKLNGFVCGKM---DPFHPSCNEAEMQSELNLAFWSLCEHHLL 346
Query: 349 PFHGVVHIGYFRTEGIESKGRAIL*SIVHFHGWKLQVQERLTRQITETVSSVMEGNLVIL 528
PFHGVVHIGYF T+G R+IL SIVHF+G+KLQVQERLTRQ++ETVSS++ G+++++
Sbjct: 347 PFHGVVHIGYFCTKGTNPIARSILESIVHFYGFKLQVQERLTRQVSETVSSLLGGDVIVV 406
Query: 529 L 531
+
Sbjct: 407 V 407
Score = 68.6 bits (166), Expect(2) = 2e-52
Identities = 30/51 (58%), Positives = 42/51 (82%)
Frame = +3
Query: 531 VVAIVEANHICMIPRGIEKLGSSTATIATLGRFSIDPSAKELFLQTVSDNT 683
V+ +VEA+H CM+ RGIEKLGS+TAT+A LGRFS D +AK +FLQ++ + +
Sbjct: 403 VIVVVEASHSCMVSRGIEKLGSNTATMALLGRFSTDAAAKNMFLQSIQNTS 453
>emb|CAN79046.1| hypothetical protein VITISV_035826 [Vitis vinifera]
Length = 435
Score = 164 bits (416), Expect(2) = 2e-52
Identities = 90/181 (49%), Positives = 117/181 (64%), Gaps = 4/181 (2%)
Frame = +1
Query: 1 WCPSRSLDLLAINGHRNTWNPLSYKTSIISEPAPASMITAVATILHSLGENPSRKELVGT 180
WCPS+S L + K ++ + M AV +IL SLGE+PSRKELV T
Sbjct: 226 WCPSQSSSAL-----------IPCKIELVHQ-----MDAAVTSILKSLGEDPSRKELVRT 269
Query: 181 PRRFVQWLMNFKSSNLXXXK----CRKQTNKDGVRPHSDRVVFRSELNLPIWSQCEHHLL 348
P R+V+WLMNF+ +NL C K D P + +SELNL WS CEHHLL
Sbjct: 270 PNRYVRWLMNFEKANLELKLNGFVCGKM---DPFHPSCNEAEMQSELNLAFWSLCEHHLL 326
Query: 349 PFHGVVHIGYFRTEGIESKGRAIL*SIVHFHGWKLQVQERLTRQITETVSSVMEGNLVIL 528
PFHGVVHIGYF T+G R+IL SIVHF+G+KLQVQERLTRQ++ETVSS++ G+++++
Sbjct: 327 PFHGVVHIGYFCTKGTNPIARSILESIVHFYGFKLQVQERLTRQVSETVSSLLGGDVIVV 386
Query: 529 L 531
+
Sbjct: 387 V 387
Score = 68.6 bits (166), Expect(2) = 2e-52
Identities = 30/51 (58%), Positives = 42/51 (82%)
Frame = +3
Query: 531 VVAIVEANHICMIPRGIEKLGSSTATIATLGRFSIDPSAKELFLQTVSDNT 683
V+ +VEA+H CM+ RGIEKLGS+TAT+A LGRFS D +AK +FLQ++ + +
Sbjct: 383 VIVVVEASHSCMVSRGIEKLGSNTATMALLGRFSTDAAAKNMFLQSIQNTS 433