BLASTX nr result

ID: Coptis21_contig00000428 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000428
         (625 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531084.1| GTP cyclohydrolase I, putative [Ricinus comm...   118   8e-46
ref|XP_003548646.1| PREDICTED: uncharacterized protein LOC100780...   115   8e-42
ref|XP_003530850.1| PREDICTED: uncharacterized protein LOC100816...   113   7e-40
ref|XP_002269265.1| PREDICTED: uncharacterized protein LOC100263...   115   1e-39
emb|CAN68065.1| hypothetical protein VITISV_014899 [Vitis vinifera]   115   1e-39

>ref|XP_002531084.1| GTP cyclohydrolase I, putative [Ricinus communis]
           gi|223529330|gb|EEF31298.1| GTP cyclohydrolase I,
           putative [Ricinus communis]
          Length = 469

 Score =  118 bits (296), Expect(3) = 8e-46
 Identities = 53/78 (67%), Positives = 68/78 (87%)
 Frame = +3

Query: 111 RSELNLPFWSQCEHHRLLFHGVVHIGYFRTEEIEPIGQAILQSIVHFHGWKLQVQERLTR 290
           +SELNL FWSQCEHH L F+GVVHIGYF+ E   PIG+++LQSIVHF+G+KLQVQERLTR
Sbjct: 341 QSELNLSFWSQCEHHLLPFYGVVHIGYFQAEGFNPIGKSLLQSIVHFYGFKLQVQERLTR 400

Query: 291 QIVETVSSVMEGNLVILL 344
           QI ET SS++ GN+++++
Sbjct: 401 QIAETASSILGGNVMVVV 418



 Score = 82.0 bits (201), Expect(3) = 8e-46
 Identities = 37/55 (67%), Positives = 46/55 (83%)
 Frame = +2

Query: 344 VVAIVEANHICMISRGIEKLGSSTATIATLGRFSTDQSAKELFLQTVSDSTTCGG 508
           V+ +VEANH CMISRGIEK GS+TATIA LGRFSTD S++ +FLQ++ +S  CGG
Sbjct: 414 VMVVVEANHTCMISRGIEKFGSNTATIAVLGRFSTDPSSRAMFLQSIPNSAACGG 468



 Score = 30.0 bits (66), Expect(3) = 8e-46
 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
 Frame = +1

Query: 1   NFKSSNLGMNLNGFGAEGMCEIKCR--KQTNKDGVRTRFDLS 120
           NF ++NL M LNGFG   M  +K       NK+ +++  +LS
Sbjct: 306 NFHNTNLEMKLNGFGCNRMDPLKANGGVSHNKEQLQSELNLS 347


>ref|XP_003548646.1| PREDICTED: uncharacterized protein LOC100780537 [Glycine max]
          Length = 471

 Score =  115 bits (289), Expect(2) = 8e-42
 Identities = 53/77 (68%), Positives = 66/77 (85%)
 Frame = +3

Query: 114 SELNLPFWSQCEHHRLLFHGVVHIGYFRTEEIEPIGQAILQSIVHFHGWKLQVQERLTRQ 293
           SELNLPFWSQCEHH L FHGVVHIGYF +E   PIG+++LQS+VHF+G+KLQVQERLTRQ
Sbjct: 343 SELNLPFWSQCEHHILPFHGVVHIGYFLSEGSNPIGKSLLQSVVHFYGFKLQVQERLTRQ 402

Query: 294 IVETVSSVMEGNLVILL 344
           I ET++ ++ G  VI++
Sbjct: 403 IAETIAPLLLGGHVIVV 419



 Score = 80.5 bits (197), Expect(2) = 8e-42
 Identities = 38/55 (69%), Positives = 46/55 (83%)
 Frame = +2

Query: 344 VVAIVEANHICMISRGIEKLGSSTATIATLGRFSTDQSAKELFLQTVSDSTTCGG 508
           V+ +VEA+H CMISRGIEK GSSTATIA LGRFSTD +A++ FLQ V+ +TT GG
Sbjct: 416 VIVVVEASHTCMISRGIEKFGSSTATIAVLGRFSTDLAARDAFLQCVASATTSGG 470


>ref|XP_003530850.1| PREDICTED: uncharacterized protein LOC100816351 [Glycine max]
          Length = 457

 Score =  113 bits (282), Expect(3) = 7e-40
 Identities = 48/77 (62%), Positives = 66/77 (85%)
 Frame = +3

Query: 114 SELNLPFWSQCEHHRLLFHGVVHIGYFRTEEIEPIGQAILQSIVHFHGWKLQVQERLTRQ 293
           SELN+PFWSQCEHH L FHGVVHIGY  ++   P+G+ +LQSIVHF+G+KLQVQERLTRQ
Sbjct: 330 SELNIPFWSQCEHHLLPFHGVVHIGYLMSDGFNPMGKLLLQSIVHFYGFKLQVQERLTRQ 389

Query: 294 IVETVSSVMEGNLVILL 344
           I ET++ ++ G++++++
Sbjct: 390 IAETIAPLLGGDVIVVV 406



 Score = 68.6 bits (166), Expect(3) = 7e-40
 Identities = 32/54 (59%), Positives = 42/54 (77%)
 Frame = +2

Query: 344 VVAIVEANHICMISRGIEKLGSSTATIATLGRFSTDQSAKELFLQTVSDSTTCG 505
           V+ +VEA+H CMISRGIEK GSSTATIA LG FST+ +A+  FL+++   T+ G
Sbjct: 402 VIVVVEASHTCMISRGIEKFGSSTATIAVLGHFSTNPTARASFLESIPRPTSSG 455



 Score = 28.9 bits (63), Expect(3) = 7e-40
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +1

Query: 1   NFKSSNLGMNLNGFGAEGMCEIKCRKQTN 87
           NF++SN  M LNGF  +G+  +   ++ N
Sbjct: 295 NFQNSNFDMKLNGFLCDGIDSLNANEEVN 323


>ref|XP_002269265.1| PREDICTED: uncharacterized protein LOC100263593 [Vitis vinifera]
          Length = 445

 Score =  115 bits (289), Expect(2) = 1e-39
 Identities = 52/77 (67%), Positives = 67/77 (87%)
 Frame = +3

Query: 114 SELNLPFWSQCEHHRLLFHGVVHIGYFRTEEIEPIGQAILQSIVHFHGWKLQVQERLTRQ 293
           SELNL FWSQCEHH L FHGVVHIGYF T+   PI ++ILQSIVHF+G+KLQVQER+TRQ
Sbjct: 321 SELNLAFWSQCEHHLLPFHGVVHIGYFCTKGTNPIAKSILQSIVHFYGFKLQVQERITRQ 380

Query: 294 IVETVSSVMEGNLVILL 344
           + ETVSS++ G++++++
Sbjct: 381 VAETVSSLLGGDVIVVV 397



 Score = 73.6 bits (179), Expect(2) = 1e-39
 Identities = 33/52 (63%), Positives = 44/52 (84%)
 Frame = +2

Query: 344 VVAIVEANHICMISRGIEKLGSSTATIATLGRFSTDQSAKELFLQTVSDSTT 499
           V+ +VEA+H CM+SRGIEKLGS+TAT+A LGRFSTD +AK +FLQ + ++ T
Sbjct: 393 VIVVVEASHSCMVSRGIEKLGSNTATMALLGRFSTDDTAKTMFLQRIQNTPT 444


>emb|CAN68065.1| hypothetical protein VITISV_014899 [Vitis vinifera]
          Length = 445

 Score =  115 bits (289), Expect(2) = 1e-39
 Identities = 52/77 (67%), Positives = 67/77 (87%)
 Frame = +3

Query: 114 SELNLPFWSQCEHHRLLFHGVVHIGYFRTEEIEPIGQAILQSIVHFHGWKLQVQERLTRQ 293
           SELNL FWSQCEHH L FHGVVHIGYF T+   PI ++ILQSIVHF+G+KLQVQER+TRQ
Sbjct: 321 SELNLAFWSQCEHHLLPFHGVVHIGYFCTKGTNPIAKSILQSIVHFYGFKLQVQERITRQ 380

Query: 294 IVETVSSVMEGNLVILL 344
           + ETVSS++ G++++++
Sbjct: 381 VAETVSSLLGGDVIVVV 397



 Score = 73.6 bits (179), Expect(2) = 1e-39
 Identities = 33/52 (63%), Positives = 44/52 (84%)
 Frame = +2

Query: 344 VVAIVEANHICMISRGIEKLGSSTATIATLGRFSTDQSAKELFLQTVSDSTT 499
           V+ +VEA+H CM+SRGIEKLGS+TAT+A LGRFSTD +AK +FLQ + ++ T
Sbjct: 393 VIVVVEASHSCMVSRGIEKLGSNTATMALLGRFSTDDTAKTMFLQRIQNTPT 444


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