BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000426
         (592 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285123.1| PREDICTED: yrdC domain-containing protein, m...   113   5e-27
ref|XP_003606393.1| YrdC domain-containing protein [Medicago tru...   114   8e-27
ref|XP_002313460.1| predicted protein [Populus trichocarpa] gi|2...   112   5e-26
ref|XP_002864693.1| hypothetical protein ARALYDRAFT_358267 [Arab...   113   7e-26
ref|XP_004148791.1| PREDICTED: yrdC domain-containing protein, m...   110   7e-26

>ref|XP_002285123.1| PREDICTED: yrdC domain-containing protein, mitochondrial [Vitis
           vinifera] gi|297746251|emb|CBI16307.3| unnamed protein
           product [Vitis vinifera]
          Length = 272

 Score =  113 bits (282), Expect(2) = 5e-27
 Identities = 62/82 (75%), Positives = 67/82 (81%), Gaps = 2/82 (2%)
 Frame = +2

Query: 116 EAVNRIYEINGRKQTSPLAICVGVVLDIERFAVT--LPHGLPENVLPGPVTVVII*GESS 289
           EAVNRIYEI GRK TSPLAICVG VLDI+RFAVT  LP GL  ++LPGPVTVV+  GE S
Sbjct: 98  EAVNRIYEIKGRKHTSPLAICVGDVLDIQRFAVTDHLPDGLLGSLLPGPVTVVLRRGELS 157

Query: 290 ILEKSLNSGLDSIGVCVPDSKF 355
           I+EKSLN GLDSIGV VPD  F
Sbjct: 158 IIEKSLNPGLDSIGVRVPDCDF 179



 Score = 33.5 bits (75), Expect(2) = 5e-27
 Identities = 17/43 (39%), Positives = 22/43 (51%)
 Frame = +1

Query: 1   GVIVPGKEEFADNXXXXXXXXXXXXVPTDILYGSACDA*SSKS 129
           GV+ P  +  A+             VPTD LYG ACDA SS++
Sbjct: 57  GVVRPATDAHAEEAIEAIKAGKVIAVPTDTLYGFACDACSSEA 99


>ref|XP_003606393.1| YrdC domain-containing protein [Medicago truncatula]
           gi|355507448|gb|AES88590.1| YrdC domain-containing
           protein [Medicago truncatula]
          Length = 462

 Score =  114 bits (286), Expect(2) = 8e-27
 Identities = 61/83 (73%), Positives = 67/83 (80%), Gaps = 2/83 (2%)
 Frame = +2

Query: 113 LEAVNRIYEINGRKQTSPLAICVGVVLDIERFAVT--LPHGLPENVLPGPVTVVII*GES 286
           LEAVNRIYEI GRK TSPLAICVG V DI RFA+T  LPHGL +++LPGPVTVV+  GES
Sbjct: 57  LEAVNRIYEIKGRKHTSPLAICVGDVSDINRFALTDHLPHGLLDSLLPGPVTVVLSRGES 116

Query: 287 SILEKSLNSGLDSIGVCVPDSKF 355
           S LE+SLN G DSIGV VPD  F
Sbjct: 117 SALERSLNPGFDSIGVRVPDCNF 139



 Score = 31.2 bits (69), Expect(2) = 8e-27
 Identities = 15/38 (39%), Positives = 18/38 (47%)
 Frame = +1

Query: 1   GVIVPGKEEFADNXXXXXXXXXXXXVPTDILYGSACDA 114
           GV+ P  + +A              VPTD LYG ACDA
Sbjct: 17  GVVHPATDAYAAEAVETLKAGKVIAVPTDTLYGFACDA 54


>ref|XP_002313460.1| predicted protein [Populus trichocarpa] gi|222849868|gb|EEE87415.1|
           predicted protein [Populus trichocarpa]
          Length = 232

 Score =  112 bits (281), Expect(2) = 5e-26
 Identities = 59/83 (71%), Positives = 67/83 (80%), Gaps = 2/83 (2%)
 Frame = +2

Query: 113 LEAVNRIYEINGRKQTSPLAICVGVVLDIERFAVT--LPHGLPENVLPGPVTVVII*GES 286
           LEAVNRIYE+ GRK TSPLAICVG V  I+ FAVT  LPHGL +++LPGPVTV++  GES
Sbjct: 57  LEAVNRIYEMKGRKHTSPLAICVGDVSQIQHFAVTEYLPHGLLDSLLPGPVTVILRRGES 116

Query: 287 SILEKSLNSGLDSIGVCVPDSKF 355
           S LEKSLN GLDS+GV VPD  F
Sbjct: 117 SALEKSLNPGLDSVGVRVPDCNF 139



 Score = 30.4 bits (67), Expect(2) = 5e-26
 Identities = 15/37 (40%), Positives = 17/37 (45%)
 Frame = +1

Query: 4   VIVPGKEEFADNXXXXXXXXXXXXVPTDILYGSACDA 114
           V+ P  E +A              VPTD LYG ACDA
Sbjct: 18  VVRPATEVYAQEAIEALKAGKVIAVPTDTLYGFACDA 54


>ref|XP_002864693.1| hypothetical protein ARALYDRAFT_358267 [Arabidopsis lyrata subsp.
           lyrata] gi|297310528|gb|EFH40952.1| hypothetical protein
           ARALYDRAFT_358267 [Arabidopsis lyrata subsp. lyrata]
          Length = 284

 Score =  113 bits (282), Expect(2) = 7e-26
 Identities = 60/83 (72%), Positives = 69/83 (83%), Gaps = 2/83 (2%)
 Frame = +2

Query: 113 LEAVNRIYEINGRKQTSPLAICVGVVLDIERFAVT--LPHGLPENVLPGPVTVVII*GES 286
           LEAVNRIYEI GRK TSPLAICVG VLDI+R A T  LPHGL +++LPGPVT+V+  GES
Sbjct: 106 LEAVNRIYEIKGRKLTSPLAICVGDVLDIKRVATTNHLPHGLLDSLLPGPVTIVLQRGES 165

Query: 287 SILEKSLNSGLDSIGVCVPDSKF 355
           SILEKSLN G+ +IGV VPD +F
Sbjct: 166 SILEKSLNPGIGTIGVRVPDCEF 188



 Score = 29.6 bits (65), Expect(2) = 7e-26
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = +1

Query: 4   VIVPGKEEFADNXXXXXXXXXXXXVPTDILYGSACDA 114
           ++ P  E +A              VPTD LYG ACDA
Sbjct: 67  LVHPATEAYAQEAIEAIKSEKVIAVPTDTLYGFACDA 103


>ref|XP_004148791.1| PREDICTED: yrdC domain-containing protein, mitochondrial-like
           [Cucumis sativus]
          Length = 281

 Score =  110 bits (276), Expect(2) = 7e-26
 Identities = 60/82 (73%), Positives = 68/82 (82%), Gaps = 2/82 (2%)
 Frame = +2

Query: 116 EAVNRIYEINGRKQTSPLAICVGVVLDIERFAVT--LPHGLPENVLPGPVTVVII*GESS 289
           EAV+RIYEI GRK TSPLAICVG V DI RFAVT  LP GL +++LPGPVTVV+  GESS
Sbjct: 107 EAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESS 166

Query: 290 ILEKSLNSGLDSIGVCVPDSKF 355
           +L+KSLN GLDSIGV VPD+ F
Sbjct: 167 VLDKSLNPGLDSIGVRVPDADF 188



 Score = 32.0 bits (71), Expect(2) = 7e-26
 Identities = 16/39 (41%), Positives = 19/39 (48%)
 Frame = +1

Query: 13  PGKEEFADNXXXXXXXXXXXXVPTDILYGSACDA*SSKS 129
           P  E FA              VPTD LYG ACDA S+++
Sbjct: 70  PASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSAEA 108