BLASTX nr result

ID: Coptis21_contig00000425 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000425
         (1756 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512226.1| transcription factor, putative [Ricinus comm...   260   7e-67
ref|XP_002319635.1| predicted protein [Populus trichocarpa] gi|2...   257   6e-66
ref|XP_002328348.1| predicted protein [Populus trichocarpa] gi|2...   255   2e-65
ref|XP_002272789.2| PREDICTED: trihelix transcription factor GTL...   252   3e-64
ref|NP_001236643.1| trihelix transcription factor [Glycine max] ...   242   2e-61

>ref|XP_002512226.1| transcription factor, putative [Ricinus communis]
            gi|223548187|gb|EEF49678.1| transcription factor,
            putative [Ricinus communis]
          Length = 634

 Score =  260 bits (665), Expect = 7e-67
 Identities = 163/383 (42%), Positives = 217/383 (56%), Gaps = 27/383 (7%)
 Frame = -3

Query: 1268 QLELLKGFSE-FVNKIMVQQEELHKKLLEDMXXXXXXXXXXXEGWKKKEMENFYKEMEFR 1092
            + E+ KGF E  ++KIM QQEE+H KLLEDM           E WKK+E++   KE+E R
Sbjct: 258  KFEMFKGFCEDIISKIMAQQEEMHNKLLEDMVKRDEEKVAREEAWKKQEIDRINKELELR 317

Query: 1091 AQEQALACDRESKIIEFLNQFTTGTSPTQGHLL------LKDEILXXXXXXXXXXXXSNV 930
            AQEQ LA DR++ II FL +F++ +S +    +         ++L            S V
Sbjct: 318  AQEQVLAGDRQTAIINFLKKFSSSSSSSSCSSIEILQHSSAHDLLKVPNSSNPSSSSSLV 377

Query: 929  LAERTCSGSRAIN---PNAPTSNAIILAKASQNQNPTPSQHNPKLPNSRILEHPPHNPXX 759
            +A      S+  N   P APTS  I L    Q+ +P  ++  P    S   +  P  P  
Sbjct: 378  IAHNPNPTSQTNNQSKPEAPTSTRIALGH--QDSSPAQAKSKPAKLTSLQEKQAPQIPSS 435

Query: 758  XXXXXXXXXXXXXXXXLA-PQNPNS-----------TSNDREDYGKRWPRDEVNSLINLR 615
                             + P  P+S           TSN+++D GKRWP+DEV +LINLR
Sbjct: 436  SSFSIATTQNPKLLNSQSNPLAPSSLSNDILYKKPTTSNNKDDLGKRWPKDEVLALINLR 495

Query: 614  CNLQTSVDDKEST--KAPLWERISQGMLELGYKRSAKKCKEKWENINKYFRKTKDANKKR 441
            C+L  S +DKE+T  KAPLWERISQGMLELGYKRSAK+CKEKWENINKYFRKTKD NKKR
Sbjct: 496  CSLCNSNEDKEATTVKAPLWERISQGMLELGYKRSAKRCKEKWENINKYFRKTKDVNKKR 555

Query: 440  SLDSKTCPYFHQLNTLYNQGRLSMPSEGPENQAHSAEIRTVTPETGVGA---CPQDAGFS 270
            S+DS+TCPYFHQL+TLYNQG L+     P  +A     ++  PE    +      + G S
Sbjct: 556  SVDSRTCPYFHQLSTLYNQGTLA----APPLEAGKERPQSALPENHTASKLNSSLNNGSS 611

Query: 269  DPIVHVNEGDKNMVQASPQEYQY 201
            +  +  NEG+KN+ QAS  ++++
Sbjct: 612  NSTLLGNEGEKNLAQASGFDFEF 634



 Score = 94.7 bits (234), Expect = 7e-17
 Identities = 60/130 (46%), Positives = 84/130 (64%), Gaps = 13/130 (10%)
 Frame = -1

Query: 1756 EPWLKEEVLALLTIRSSLGIEFSDFIWGHVSRKLAELGFKRSAEKCKEKFEEVSK-XXXX 1580
            +PW  +EVLALL IRSS+   F ++ W HVSRKLAELGFKRSAEKCKEKFEE ++     
Sbjct: 110  DPWSNDEVLALLRIRSSMENWFPEYTWEHVSRKLAELGFKRSAEKCKEKFEEENRYFNNI 169

Query: 1579 XXXXXXYRSFNELEALFEDQSHKSVDD--------KMLKSN--EEEKMDVNMEENS-ANE 1433
                  YR F ELE L+   ++++  +        KM K++  EE+K++ N+EE+S  ++
Sbjct: 170  NYSKNNYRFFGELEELYNGHNNQNPQEAVAAEKNKKMDKASQKEEDKIEQNVEEDSRVDQ 229

Query: 1432 TLEN-PVEEN 1406
            T+ N P EE+
Sbjct: 230  TVGNYPTEED 239



 Score = 58.2 bits (139), Expect = 7e-06
 Identities = 32/98 (32%), Positives = 49/98 (50%)
 Frame = -3

Query: 653 WPRDEVNSLINLRCNLQTSVDDKESTKAPLWERISQGMLELGYKRSAKKCKEKWENINKY 474
           W  DEV +L+ +R +++    +        WE +S+ + ELG+KRSA+KCKEK+E  N+Y
Sbjct: 112 WSNDEVLALLRIRSSMENWFPEYT------WEHVSRKLAELGFKRSAEKCKEKFEEENRY 165

Query: 473 FRKTKDANKKRSLDSKTCPYFHQLNTLYNQGRLSMPSE 360
           F          +       +F +L  LYN      P E
Sbjct: 166 FNNI-------NYSKNNYRFFGELEELYNGHNNQNPQE 196


>ref|XP_002319635.1| predicted protein [Populus trichocarpa] gi|222858011|gb|EEE95558.1|
            predicted protein [Populus trichocarpa]
          Length = 626

 Score =  257 bits (657), Expect = 6e-66
 Identities = 165/395 (41%), Positives = 212/395 (53%), Gaps = 39/395 (9%)
 Frame = -3

Query: 1268 QLELLKGFSE-FVNKIMVQQEELHKKLLEDMXXXXXXXXXXXEGWKKKEMENFYKEMEFR 1092
            + E+ K   E  VN +M QQEE+H KLLED+           E  KK EM+   KE+E R
Sbjct: 251  KFEMFKRLCEDIVNTMMAQQEEMHNKLLEDIVKRDEEKVAKEEARKKLEMDRINKELELR 310

Query: 1091 AQEQALACDRESKIIEFLNQFTTGTSPTQ--GHLLLKDEILXXXXXXXXXXXXSNVLAER 918
            A EQALA DR++ +I FL +FT+  S  +  G  +  D +              NV    
Sbjct: 311  AHEQALANDRQATLIRFLKKFTSSDSSVEILGEKIAPDPV--------------NVPNSS 356

Query: 917  TCSGSRAI------NPNAPTSNAIILAKASQNQNPTPSQHNP----KLPNSRILEHPPHN 768
              S S ++      NP + TSN   L  A+ +      Q +     K   S      P N
Sbjct: 357  NASSSSSLVLEQNPNPASQTSNESQLKTATSSATALDHQKSTSILAKTNTSWTENQEPQN 416

Query: 767  PXXXXXXXXXXXXXXXXXXL---APQNPN----------------------STSNDREDY 663
            P                      APQNPN                      + S  ++D 
Sbjct: 417  PTSTLARNIPQVPTTSSTLAVPAAPQNPNFLNSHSSTSGPPNTLPSHNKVQAKSTYKDDI 476

Query: 662  GKRWPRDEVNSLINLRCNLQTSVDDKE-STKAPLWERISQGMLELGYKRSAKKCKEKWEN 486
            GKRWPRDEV +LINLRC+L  + +DKE S +APLWERISQGMLE GYKRSAK+CKEKWEN
Sbjct: 477  GKRWPRDEVLALINLRCSLYNNNEDKEGSARAPLWERISQGMLESGYKRSAKRCKEKWEN 536

Query: 485  INKYFRKTKDANKKRSLDSKTCPYFHQLNTLYNQGRLSMPSEGPENQAHSAEIRTVTPET 306
            INKYFRKTKD NKKRS+DS+TCPYFHQL+TLYNQG L      P+N++ S E R+  PET
Sbjct: 537  INKYFRKTKDVNKKRSIDSRTCPYFHQLSTLYNQGTL----VAPDNRSASPENRSSLPET 592

Query: 305  GVGACPQDAGFSDPIVHVNEGDKNMVQASPQEYQY 201
               +  Q+ G S+  +HV +G+KNMVQ  P ++++
Sbjct: 593  RHSSSSQN-GTSNSTLHVGDGEKNMVQVPPLDFEF 626



 Score = 92.8 bits (229), Expect = 3e-16
 Identities = 54/131 (41%), Positives = 75/131 (57%), Gaps = 15/131 (11%)
 Frame = -1

Query: 1753 PWLKEEVLALLTIRSSLGIEFSDFIWGHVSRKLAELGFKRSAEKCKEKFEEVSKXXXXXX 1574
            PW  +EVLALL IRSS+   F +F W HVSRKLAE GFKRSAEKCKEKFEE S+      
Sbjct: 100  PWSNDEVLALLRIRSSMETWFPEFTWEHVSRKLAEAGFKRSAEKCKEKFEEESRYFNISN 159

Query: 1573 XXXXYR---SFNELEALFE-----------DQSHKSVDDKMLKSNEEEKMDVNMEENS-A 1439
                     SF+ELE ++             + +K +D    +  E++KM  N+EE +  
Sbjct: 160  INYNKNYRASFSELEEIYHGDQNPHQEVTAGEKNKKIDKPGTEDEEQDKMRQNLEEETRI 219

Query: 1438 NETLENPVEEN 1406
            ++T+ N  +++
Sbjct: 220  DQTVGNQTDQD 230


>ref|XP_002328348.1| predicted protein [Populus trichocarpa] gi|222838063|gb|EEE76428.1|
            predicted protein [Populus trichocarpa]
          Length = 475

 Score =  255 bits (652), Expect = 2e-65
 Identities = 157/362 (43%), Positives = 204/362 (56%), Gaps = 6/362 (1%)
 Frame = -3

Query: 1268 QLELLKGFSE-FVNKIMVQQEELHKKLLEDMXXXXXXXXXXXEGWKKKEMENFYKEMEFR 1092
            + E+ KG  E  VNK+M QQEE H KLLED+           E WKK EM+   KE+E R
Sbjct: 169  KFEMFKGICEDIVNKMMAQQEEKHNKLLEDIVKRDEEKFAREEAWKKLEMDRINKELELR 228

Query: 1091 AQEQALACDRESKIIEFLNQFTTGTSPTQGHLLLKDEILXXXXXXXXXXXXSNVLAERTC 912
            A EQALA DR   +I+FL + T+  +P                         +    +  
Sbjct: 229  AHEQALAGDRLDTLIKFLKKITSAQNPNPA----------------------SQTKPQNP 266

Query: 911  SGSRAIN-PNAPTSNAIILAKASQNQNPTPSQHNPKLPNSRILEHPPHNPXXXXXXXXXX 735
            + + A N P APT+++  LA A QN N   S ++P  P+S +  +               
Sbjct: 267  NSTLAPNIPQAPTTSST-LALAPQNPNSLNSHNSPSGPSSILPMYKVQ------------ 313

Query: 734  XXXXXXXXLAPQNPNSTSNDREDYGKRWPRDEVNSLINLRCNLQTSVDDKE-STKAPLWE 558
                           STSND +D GKRWPRDEV +LINLRC+L  + +DKE S KAP+WE
Sbjct: 314  -------------AKSTSNDEDDIGKRWPRDEVLALINLRCSLYNNNEDKEGSAKAPVWE 360

Query: 557  RISQGMLELGYKRSAKKCKEKWENINKYFRKTKDANKKRSLDSKTCPYFHQLNTLYNQGR 378
            RISQGMLELGYKRSAK+CK+KWENINKYFRKTKDA+KKR ++S+T PYFHQL+TLYN G 
Sbjct: 361  RISQGMLELGYKRSAKRCKQKWENINKYFRKTKDASKKRYINSRTSPYFHQLSTLYNHGT 420

Query: 377  LSMP---SEGPENQAHSAEIRTVTPETGVGACPQDAGFSDPIVHVNEGDKNMVQASPQEY 207
            L  P   S  PENQ++ +E R         +     G S+  +HV EG+KN VQ  P ++
Sbjct: 421  LVAPKNRSASPENQSNLSETRH-------SSSSSQNGTSNSAMHVVEGEKNKVQVPPFDF 473

Query: 206  QY 201
            ++
Sbjct: 474  EF 475



 Score = 75.5 bits (184), Expect = 4e-11
 Identities = 49/128 (38%), Positives = 64/128 (50%), Gaps = 9/128 (7%)
 Frame = -1

Query: 1753 PWLKEEVLALLTIRSSLGIEFSDFIWGHVS-RKLAELGFKRSAEKCKEKFEEVS---KXX 1586
            PW  +EVL LL IRSS+   F +F W H S R LAE+GFKRS EK KEKFEE S      
Sbjct: 19   PWSNDEVLPLLRIRSSMDNWFPEFTWEHASSRNLAEVGFKRSTEKWKEKFEEESGYFNSN 78

Query: 1585 XXXXXXXXYRSFNELEALFE-----DQSHKSVDDKMLKSNEEEKMDVNMEENSANETLEN 1421
                      SF+E E ++      DQ   +  +K ++   E++    M +N   ET  +
Sbjct: 79   IDIYSKNYRASFSEFEEIYHGDQNPDQQEATAGEKKIRKPSEDEQQDKMGQNLEEETRID 138

Query: 1420 PVEENQYV 1397
                NQ V
Sbjct: 139  QTVGNQSV 146


>ref|XP_002272789.2| PREDICTED: trihelix transcription factor GTL2-like [Vitis vinifera]
          Length = 615

 Score =  252 bits (643), Expect = 3e-64
 Identities = 160/392 (40%), Positives = 208/392 (53%), Gaps = 38/392 (9%)
 Frame = -3

Query: 1262 ELLKGFSE-FVNKIMVQQEELHKKLLEDMXXXXXXXXXXXEGWKKKEMENFYKEMEFRAQ 1086
            E+ KGF E  V+K+M QQEE+H KLLEDM           E WKK+EM+   KE+E R  
Sbjct: 260  EMFKGFCEAVVSKMMAQQEEMHNKLLEDMVKRDEEKTAREEAWKKQEMDRINKEIEIREH 319

Query: 1085 EQALACDRESKIIEFLNQFTTG-------------------------TSPTQ-------- 1005
            EQA+A DR++ II FL +FT+                          TSP+         
Sbjct: 320  EQAIAGDRQATIIGFLKKFTSSNPVETPCFGNNEGELSKVPSRSNPPTSPSSILPQNPNP 379

Query: 1004 -GHLLLKDEILXXXXXXXXXXXXSNVLAERTCSGSRAINPNAPTSNAIILAKASQNQNPT 828
              HL  +++ L              V  +  CS +   NPNAP      + +A  +QNPT
Sbjct: 380  TSHLSPQNKQLEAPTSSRKVI----VPHQNPCSLTTPTNPNAP------IDEAQPSQNPT 429

Query: 827  PSQHNPKLPNSRILEHPPHNPXXXXXXXXXXXXXXXXXXLAPQNPNSTSNDREDYGKRWP 648
                  + PNS   +  P  P                       P+ T +  ++ GKRWP
Sbjct: 430  SMVLESQNPNSLNTQKRPSAPTSF--------------------PSITDHRDQELGKRWP 469

Query: 647  RDEVNSLINLRCNLQTSVDDKESTKAPLWERISQGMLELGYKRSAKKCKEKWENINKYFR 468
            RDEV +LINLRC+L  +V+DKE  K PLWERISQGML LGYKRSAK+CKEKWENINKYFR
Sbjct: 470  RDEVLALINLRCSL--NVEDKEGAKGPLWERISQGMLALGYKRSAKRCKEKWENINKYFR 527

Query: 467  KTKDANKKRSLDSKTCPYFHQLNTLYNQGRLSMPSE---GPENQAHSAEIRTVTPETGVG 297
            KTKD +KKRSLDS+TCPYFHQL+TLY+QG L +PS     PEN  +S+E  +  PE  VG
Sbjct: 528  KTKDVSKKRSLDSRTCPYFHQLSTLYSQGTLVVPSSEAPAPENCLNSSENHSSLPENQVG 587

Query: 296  ACPQDAGFSDPIVHVNEGDKNMVQASPQEYQY 201
                +          +EG++N  Q    ++++
Sbjct: 588  GSSSNTNMH----AADEGEENAAQLPAYDFKF 615



 Score = 94.7 bits (234), Expect = 7e-17
 Identities = 61/126 (48%), Positives = 77/126 (61%), Gaps = 7/126 (5%)
 Frame = -1

Query: 1753 PWLKEEVLALLTIRSSLGIEFSDFIWGHVSRKLAELGFKRSAEKCKEKFEEVSK-XXXXX 1577
            PW  +EVLALL IRSS+   + DF W HVSRKLAE GFKRSAEKCKEKFE+ S+      
Sbjct: 118  PWSNDEVLALLRIRSSMENWYPDFTWEHVSRKLAEQGFKRSAEKCKEKFEQESRYFNTTM 177

Query: 1576 XXXXXYRSFNELEALFEDQSHKSVD-----DKMLKSNEEEKMDVNMEENSANET-LENPV 1415
                 YR F+ELE L+  +S    D      K+++   EE  D ++EE+S NET + NP 
Sbjct: 178  NYSKNYRFFSELEELYHGESPHQQDVAEKNQKVVEKPNEE--DRSLEEDSRNETVVGNPC 235

Query: 1414 EENQYV 1397
             E + V
Sbjct: 236  LETEKV 241


>ref|NP_001236643.1| trihelix transcription factor [Glycine max]
            gi|146674837|gb|ABQ42350.1| trihelix transcription factor
            [Glycine max]
          Length = 581

 Score =  242 bits (618), Expect = 2e-61
 Identities = 140/312 (44%), Positives = 181/312 (58%), Gaps = 5/312 (1%)
 Frame = -3

Query: 1268 QLELLKGFSE-FVNKIMVQQEELHKKLLEDMXXXXXXXXXXXEGWKKKEMENFYKEMEFR 1092
            + E+ KGF E  V+K+M QQEE+H KLLEDM           E WKK+EME   KE+E  
Sbjct: 250  RFEMFKGFCESIVHKMMTQQEEMHNKLLEDMMKRDEEKFTREEAWKKQEMEKMNKELEMM 309

Query: 1091 AQEQALACDRESKIIEFLNQFTTGTSPTQGHLLLKDEILXXXXXXXXXXXXSNVLAERTC 912
            A+EQA+A DR++KII+ LN+F+  TS    H L K                 N    +  
Sbjct: 310  AREQAVAGDRQAKIIQILNKFSATTSSPASHTLKK----------------VNTHISQNP 353

Query: 911  SGSRAINPNAPTSNAIILAKASQNQNPTPSQHNPKLPNSRILEHPPHNPXXXXXXXXXXX 732
            + S+  NP    +   ++   S    P P+   P+ P+S  L    +N            
Sbjct: 354  NPSQTENPTLSVAQDTLIPSTSSTSTPAPAP--PQNPSSCSLNSQNNNHINNNIPVEKNS 411

Query: 731  XXXXXXXLAPQNPNSTSNDREDYGKRWPRDEVNSLINLRC---NLQTSVDDKE-STKAPL 564
                       N  S+SN+++D G+RWP+DEV +LINLRC   N   + ++KE + K PL
Sbjct: 412  IL---------NKGSSSNEKDDVGRRWPKDEVLALINLRCTSVNNNNNNEEKEGNNKVPL 462

Query: 563  WERISQGMLELGYKRSAKKCKEKWENINKYFRKTKDANKKRSLDSKTCPYFHQLNTLYNQ 384
            WERISQGM EL YKRSAK+CKEKWENINKYFRKTKD  KKRSLDS+TCPYFHQL++LYNQ
Sbjct: 463  WERISQGMSELRYKRSAKRCKEKWENINKYFRKTKDITKKRSLDSRTCPYFHQLSSLYNQ 522

Query: 383  GRLSMPSEGPEN 348
            G+L + SE   N
Sbjct: 523  GKLVLQSESHLN 534



 Score = 77.0 bits (188), Expect = 1e-11
 Identities = 36/55 (65%), Positives = 43/55 (78%)
 Frame = -1

Query: 1756 EPWLKEEVLALLTIRSSLGIEFSDFIWGHVSRKLAELGFKRSAEKCKEKFEEVSK 1592
            +PW  +EVL LL IRSS+   F +  W HVSR+LAELG+KRSAEKCKEKFEE S+
Sbjct: 95   DPWTTDEVLTLLRIRSSMESWFPELTWEHVSRRLAELGYKRSAEKCKEKFEEESR 149



 Score = 60.8 bits (146), Expect = 1e-06
 Identities = 30/90 (33%), Positives = 51/90 (56%)
 Frame = -3

Query: 653 WPRDEVNSLINLRCNLQTSVDDKESTKAPLWERISQGMLELGYKRSAKKCKEKWENINKY 474
           W  DEV +L+ +R ++++   +        WE +S+ + ELGYKRSA+KCKEK+E  ++Y
Sbjct: 97  WTTDEVLTLLRIRSSMESWFPELT------WEHVSRRLAELGYKRSAEKCKEKFEEESRY 150

Query: 473 FRKTKDANKKRSLDSKTCPYFHQLNTLYNQ 384
           F    +  K  +  +    +  +L  LY+Q
Sbjct: 151 FNNDINYAKNNNNSTSNYRFLSELEQLYHQ 180


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