BLASTX nr result
ID: Coptis21_contig00000425
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00000425
(1756 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002512226.1| transcription factor, putative [Ricinus comm... 260 7e-67
ref|XP_002319635.1| predicted protein [Populus trichocarpa] gi|2... 257 6e-66
ref|XP_002328348.1| predicted protein [Populus trichocarpa] gi|2... 255 2e-65
ref|XP_002272789.2| PREDICTED: trihelix transcription factor GTL... 252 3e-64
ref|NP_001236643.1| trihelix transcription factor [Glycine max] ... 242 2e-61
>ref|XP_002512226.1| transcription factor, putative [Ricinus communis]
gi|223548187|gb|EEF49678.1| transcription factor,
putative [Ricinus communis]
Length = 634
Score = 260 bits (665), Expect = 7e-67
Identities = 163/383 (42%), Positives = 217/383 (56%), Gaps = 27/383 (7%)
Frame = -3
Query: 1268 QLELLKGFSE-FVNKIMVQQEELHKKLLEDMXXXXXXXXXXXEGWKKKEMENFYKEMEFR 1092
+ E+ KGF E ++KIM QQEE+H KLLEDM E WKK+E++ KE+E R
Sbjct: 258 KFEMFKGFCEDIISKIMAQQEEMHNKLLEDMVKRDEEKVAREEAWKKQEIDRINKELELR 317
Query: 1091 AQEQALACDRESKIIEFLNQFTTGTSPTQGHLL------LKDEILXXXXXXXXXXXXSNV 930
AQEQ LA DR++ II FL +F++ +S + + ++L S V
Sbjct: 318 AQEQVLAGDRQTAIINFLKKFSSSSSSSSCSSIEILQHSSAHDLLKVPNSSNPSSSSSLV 377
Query: 929 LAERTCSGSRAIN---PNAPTSNAIILAKASQNQNPTPSQHNPKLPNSRILEHPPHNPXX 759
+A S+ N P APTS I L Q+ +P ++ P S + P P
Sbjct: 378 IAHNPNPTSQTNNQSKPEAPTSTRIALGH--QDSSPAQAKSKPAKLTSLQEKQAPQIPSS 435
Query: 758 XXXXXXXXXXXXXXXXLA-PQNPNS-----------TSNDREDYGKRWPRDEVNSLINLR 615
+ P P+S TSN+++D GKRWP+DEV +LINLR
Sbjct: 436 SSFSIATTQNPKLLNSQSNPLAPSSLSNDILYKKPTTSNNKDDLGKRWPKDEVLALINLR 495
Query: 614 CNLQTSVDDKEST--KAPLWERISQGMLELGYKRSAKKCKEKWENINKYFRKTKDANKKR 441
C+L S +DKE+T KAPLWERISQGMLELGYKRSAK+CKEKWENINKYFRKTKD NKKR
Sbjct: 496 CSLCNSNEDKEATTVKAPLWERISQGMLELGYKRSAKRCKEKWENINKYFRKTKDVNKKR 555
Query: 440 SLDSKTCPYFHQLNTLYNQGRLSMPSEGPENQAHSAEIRTVTPETGVGA---CPQDAGFS 270
S+DS+TCPYFHQL+TLYNQG L+ P +A ++ PE + + G S
Sbjct: 556 SVDSRTCPYFHQLSTLYNQGTLA----APPLEAGKERPQSALPENHTASKLNSSLNNGSS 611
Query: 269 DPIVHVNEGDKNMVQASPQEYQY 201
+ + NEG+KN+ QAS ++++
Sbjct: 612 NSTLLGNEGEKNLAQASGFDFEF 634
Score = 94.7 bits (234), Expect = 7e-17
Identities = 60/130 (46%), Positives = 84/130 (64%), Gaps = 13/130 (10%)
Frame = -1
Query: 1756 EPWLKEEVLALLTIRSSLGIEFSDFIWGHVSRKLAELGFKRSAEKCKEKFEEVSK-XXXX 1580
+PW +EVLALL IRSS+ F ++ W HVSRKLAELGFKRSAEKCKEKFEE ++
Sbjct: 110 DPWSNDEVLALLRIRSSMENWFPEYTWEHVSRKLAELGFKRSAEKCKEKFEEENRYFNNI 169
Query: 1579 XXXXXXYRSFNELEALFEDQSHKSVDD--------KMLKSN--EEEKMDVNMEENS-ANE 1433
YR F ELE L+ ++++ + KM K++ EE+K++ N+EE+S ++
Sbjct: 170 NYSKNNYRFFGELEELYNGHNNQNPQEAVAAEKNKKMDKASQKEEDKIEQNVEEDSRVDQ 229
Query: 1432 TLEN-PVEEN 1406
T+ N P EE+
Sbjct: 230 TVGNYPTEED 239
Score = 58.2 bits (139), Expect = 7e-06
Identities = 32/98 (32%), Positives = 49/98 (50%)
Frame = -3
Query: 653 WPRDEVNSLINLRCNLQTSVDDKESTKAPLWERISQGMLELGYKRSAKKCKEKWENINKY 474
W DEV +L+ +R +++ + WE +S+ + ELG+KRSA+KCKEK+E N+Y
Sbjct: 112 WSNDEVLALLRIRSSMENWFPEYT------WEHVSRKLAELGFKRSAEKCKEKFEEENRY 165
Query: 473 FRKTKDANKKRSLDSKTCPYFHQLNTLYNQGRLSMPSE 360
F + +F +L LYN P E
Sbjct: 166 FNNI-------NYSKNNYRFFGELEELYNGHNNQNPQE 196
>ref|XP_002319635.1| predicted protein [Populus trichocarpa] gi|222858011|gb|EEE95558.1|
predicted protein [Populus trichocarpa]
Length = 626
Score = 257 bits (657), Expect = 6e-66
Identities = 165/395 (41%), Positives = 212/395 (53%), Gaps = 39/395 (9%)
Frame = -3
Query: 1268 QLELLKGFSE-FVNKIMVQQEELHKKLLEDMXXXXXXXXXXXEGWKKKEMENFYKEMEFR 1092
+ E+ K E VN +M QQEE+H KLLED+ E KK EM+ KE+E R
Sbjct: 251 KFEMFKRLCEDIVNTMMAQQEEMHNKLLEDIVKRDEEKVAKEEARKKLEMDRINKELELR 310
Query: 1091 AQEQALACDRESKIIEFLNQFTTGTSPTQ--GHLLLKDEILXXXXXXXXXXXXSNVLAER 918
A EQALA DR++ +I FL +FT+ S + G + D + NV
Sbjct: 311 AHEQALANDRQATLIRFLKKFTSSDSSVEILGEKIAPDPV--------------NVPNSS 356
Query: 917 TCSGSRAI------NPNAPTSNAIILAKASQNQNPTPSQHNP----KLPNSRILEHPPHN 768
S S ++ NP + TSN L A+ + Q + K S P N
Sbjct: 357 NASSSSSLVLEQNPNPASQTSNESQLKTATSSATALDHQKSTSILAKTNTSWTENQEPQN 416
Query: 767 PXXXXXXXXXXXXXXXXXXL---APQNPN----------------------STSNDREDY 663
P APQNPN + S ++D
Sbjct: 417 PTSTLARNIPQVPTTSSTLAVPAAPQNPNFLNSHSSTSGPPNTLPSHNKVQAKSTYKDDI 476
Query: 662 GKRWPRDEVNSLINLRCNLQTSVDDKE-STKAPLWERISQGMLELGYKRSAKKCKEKWEN 486
GKRWPRDEV +LINLRC+L + +DKE S +APLWERISQGMLE GYKRSAK+CKEKWEN
Sbjct: 477 GKRWPRDEVLALINLRCSLYNNNEDKEGSARAPLWERISQGMLESGYKRSAKRCKEKWEN 536
Query: 485 INKYFRKTKDANKKRSLDSKTCPYFHQLNTLYNQGRLSMPSEGPENQAHSAEIRTVTPET 306
INKYFRKTKD NKKRS+DS+TCPYFHQL+TLYNQG L P+N++ S E R+ PET
Sbjct: 537 INKYFRKTKDVNKKRSIDSRTCPYFHQLSTLYNQGTL----VAPDNRSASPENRSSLPET 592
Query: 305 GVGACPQDAGFSDPIVHVNEGDKNMVQASPQEYQY 201
+ Q+ G S+ +HV +G+KNMVQ P ++++
Sbjct: 593 RHSSSSQN-GTSNSTLHVGDGEKNMVQVPPLDFEF 626
Score = 92.8 bits (229), Expect = 3e-16
Identities = 54/131 (41%), Positives = 75/131 (57%), Gaps = 15/131 (11%)
Frame = -1
Query: 1753 PWLKEEVLALLTIRSSLGIEFSDFIWGHVSRKLAELGFKRSAEKCKEKFEEVSKXXXXXX 1574
PW +EVLALL IRSS+ F +F W HVSRKLAE GFKRSAEKCKEKFEE S+
Sbjct: 100 PWSNDEVLALLRIRSSMETWFPEFTWEHVSRKLAEAGFKRSAEKCKEKFEEESRYFNISN 159
Query: 1573 XXXXYR---SFNELEALFE-----------DQSHKSVDDKMLKSNEEEKMDVNMEENS-A 1439
SF+ELE ++ + +K +D + E++KM N+EE +
Sbjct: 160 INYNKNYRASFSELEEIYHGDQNPHQEVTAGEKNKKIDKPGTEDEEQDKMRQNLEEETRI 219
Query: 1438 NETLENPVEEN 1406
++T+ N +++
Sbjct: 220 DQTVGNQTDQD 230
>ref|XP_002328348.1| predicted protein [Populus trichocarpa] gi|222838063|gb|EEE76428.1|
predicted protein [Populus trichocarpa]
Length = 475
Score = 255 bits (652), Expect = 2e-65
Identities = 157/362 (43%), Positives = 204/362 (56%), Gaps = 6/362 (1%)
Frame = -3
Query: 1268 QLELLKGFSE-FVNKIMVQQEELHKKLLEDMXXXXXXXXXXXEGWKKKEMENFYKEMEFR 1092
+ E+ KG E VNK+M QQEE H KLLED+ E WKK EM+ KE+E R
Sbjct: 169 KFEMFKGICEDIVNKMMAQQEEKHNKLLEDIVKRDEEKFAREEAWKKLEMDRINKELELR 228
Query: 1091 AQEQALACDRESKIIEFLNQFTTGTSPTQGHLLLKDEILXXXXXXXXXXXXSNVLAERTC 912
A EQALA DR +I+FL + T+ +P + +
Sbjct: 229 AHEQALAGDRLDTLIKFLKKITSAQNPNPA----------------------SQTKPQNP 266
Query: 911 SGSRAIN-PNAPTSNAIILAKASQNQNPTPSQHNPKLPNSRILEHPPHNPXXXXXXXXXX 735
+ + A N P APT+++ LA A QN N S ++P P+S + +
Sbjct: 267 NSTLAPNIPQAPTTSST-LALAPQNPNSLNSHNSPSGPSSILPMYKVQ------------ 313
Query: 734 XXXXXXXXLAPQNPNSTSNDREDYGKRWPRDEVNSLINLRCNLQTSVDDKE-STKAPLWE 558
STSND +D GKRWPRDEV +LINLRC+L + +DKE S KAP+WE
Sbjct: 314 -------------AKSTSNDEDDIGKRWPRDEVLALINLRCSLYNNNEDKEGSAKAPVWE 360
Query: 557 RISQGMLELGYKRSAKKCKEKWENINKYFRKTKDANKKRSLDSKTCPYFHQLNTLYNQGR 378
RISQGMLELGYKRSAK+CK+KWENINKYFRKTKDA+KKR ++S+T PYFHQL+TLYN G
Sbjct: 361 RISQGMLELGYKRSAKRCKQKWENINKYFRKTKDASKKRYINSRTSPYFHQLSTLYNHGT 420
Query: 377 LSMP---SEGPENQAHSAEIRTVTPETGVGACPQDAGFSDPIVHVNEGDKNMVQASPQEY 207
L P S PENQ++ +E R + G S+ +HV EG+KN VQ P ++
Sbjct: 421 LVAPKNRSASPENQSNLSETRH-------SSSSSQNGTSNSAMHVVEGEKNKVQVPPFDF 473
Query: 206 QY 201
++
Sbjct: 474 EF 475
Score = 75.5 bits (184), Expect = 4e-11
Identities = 49/128 (38%), Positives = 64/128 (50%), Gaps = 9/128 (7%)
Frame = -1
Query: 1753 PWLKEEVLALLTIRSSLGIEFSDFIWGHVS-RKLAELGFKRSAEKCKEKFEEVS---KXX 1586
PW +EVL LL IRSS+ F +F W H S R LAE+GFKRS EK KEKFEE S
Sbjct: 19 PWSNDEVLPLLRIRSSMDNWFPEFTWEHASSRNLAEVGFKRSTEKWKEKFEEESGYFNSN 78
Query: 1585 XXXXXXXXYRSFNELEALFE-----DQSHKSVDDKMLKSNEEEKMDVNMEENSANETLEN 1421
SF+E E ++ DQ + +K ++ E++ M +N ET +
Sbjct: 79 IDIYSKNYRASFSEFEEIYHGDQNPDQQEATAGEKKIRKPSEDEQQDKMGQNLEEETRID 138
Query: 1420 PVEENQYV 1397
NQ V
Sbjct: 139 QTVGNQSV 146
>ref|XP_002272789.2| PREDICTED: trihelix transcription factor GTL2-like [Vitis vinifera]
Length = 615
Score = 252 bits (643), Expect = 3e-64
Identities = 160/392 (40%), Positives = 208/392 (53%), Gaps = 38/392 (9%)
Frame = -3
Query: 1262 ELLKGFSE-FVNKIMVQQEELHKKLLEDMXXXXXXXXXXXEGWKKKEMENFYKEMEFRAQ 1086
E+ KGF E V+K+M QQEE+H KLLEDM E WKK+EM+ KE+E R
Sbjct: 260 EMFKGFCEAVVSKMMAQQEEMHNKLLEDMVKRDEEKTAREEAWKKQEMDRINKEIEIREH 319
Query: 1085 EQALACDRESKIIEFLNQFTTG-------------------------TSPTQ-------- 1005
EQA+A DR++ II FL +FT+ TSP+
Sbjct: 320 EQAIAGDRQATIIGFLKKFTSSNPVETPCFGNNEGELSKVPSRSNPPTSPSSILPQNPNP 379
Query: 1004 -GHLLLKDEILXXXXXXXXXXXXSNVLAERTCSGSRAINPNAPTSNAIILAKASQNQNPT 828
HL +++ L V + CS + NPNAP + +A +QNPT
Sbjct: 380 TSHLSPQNKQLEAPTSSRKVI----VPHQNPCSLTTPTNPNAP------IDEAQPSQNPT 429
Query: 827 PSQHNPKLPNSRILEHPPHNPXXXXXXXXXXXXXXXXXXLAPQNPNSTSNDREDYGKRWP 648
+ PNS + P P P+ T + ++ GKRWP
Sbjct: 430 SMVLESQNPNSLNTQKRPSAPTSF--------------------PSITDHRDQELGKRWP 469
Query: 647 RDEVNSLINLRCNLQTSVDDKESTKAPLWERISQGMLELGYKRSAKKCKEKWENINKYFR 468
RDEV +LINLRC+L +V+DKE K PLWERISQGML LGYKRSAK+CKEKWENINKYFR
Sbjct: 470 RDEVLALINLRCSL--NVEDKEGAKGPLWERISQGMLALGYKRSAKRCKEKWENINKYFR 527
Query: 467 KTKDANKKRSLDSKTCPYFHQLNTLYNQGRLSMPSE---GPENQAHSAEIRTVTPETGVG 297
KTKD +KKRSLDS+TCPYFHQL+TLY+QG L +PS PEN +S+E + PE VG
Sbjct: 528 KTKDVSKKRSLDSRTCPYFHQLSTLYSQGTLVVPSSEAPAPENCLNSSENHSSLPENQVG 587
Query: 296 ACPQDAGFSDPIVHVNEGDKNMVQASPQEYQY 201
+ +EG++N Q ++++
Sbjct: 588 GSSSNTNMH----AADEGEENAAQLPAYDFKF 615
Score = 94.7 bits (234), Expect = 7e-17
Identities = 61/126 (48%), Positives = 77/126 (61%), Gaps = 7/126 (5%)
Frame = -1
Query: 1753 PWLKEEVLALLTIRSSLGIEFSDFIWGHVSRKLAELGFKRSAEKCKEKFEEVSK-XXXXX 1577
PW +EVLALL IRSS+ + DF W HVSRKLAE GFKRSAEKCKEKFE+ S+
Sbjct: 118 PWSNDEVLALLRIRSSMENWYPDFTWEHVSRKLAEQGFKRSAEKCKEKFEQESRYFNTTM 177
Query: 1576 XXXXXYRSFNELEALFEDQSHKSVD-----DKMLKSNEEEKMDVNMEENSANET-LENPV 1415
YR F+ELE L+ +S D K+++ EE D ++EE+S NET + NP
Sbjct: 178 NYSKNYRFFSELEELYHGESPHQQDVAEKNQKVVEKPNEE--DRSLEEDSRNETVVGNPC 235
Query: 1414 EENQYV 1397
E + V
Sbjct: 236 LETEKV 241
>ref|NP_001236643.1| trihelix transcription factor [Glycine max]
gi|146674837|gb|ABQ42350.1| trihelix transcription factor
[Glycine max]
Length = 581
Score = 242 bits (618), Expect = 2e-61
Identities = 140/312 (44%), Positives = 181/312 (58%), Gaps = 5/312 (1%)
Frame = -3
Query: 1268 QLELLKGFSE-FVNKIMVQQEELHKKLLEDMXXXXXXXXXXXEGWKKKEMENFYKEMEFR 1092
+ E+ KGF E V+K+M QQEE+H KLLEDM E WKK+EME KE+E
Sbjct: 250 RFEMFKGFCESIVHKMMTQQEEMHNKLLEDMMKRDEEKFTREEAWKKQEMEKMNKELEMM 309
Query: 1091 AQEQALACDRESKIIEFLNQFTTGTSPTQGHLLLKDEILXXXXXXXXXXXXSNVLAERTC 912
A+EQA+A DR++KII+ LN+F+ TS H L K N +
Sbjct: 310 AREQAVAGDRQAKIIQILNKFSATTSSPASHTLKK----------------VNTHISQNP 353
Query: 911 SGSRAINPNAPTSNAIILAKASQNQNPTPSQHNPKLPNSRILEHPPHNPXXXXXXXXXXX 732
+ S+ NP + ++ S P P+ P+ P+S L +N
Sbjct: 354 NPSQTENPTLSVAQDTLIPSTSSTSTPAPAP--PQNPSSCSLNSQNNNHINNNIPVEKNS 411
Query: 731 XXXXXXXLAPQNPNSTSNDREDYGKRWPRDEVNSLINLRC---NLQTSVDDKE-STKAPL 564
N S+SN+++D G+RWP+DEV +LINLRC N + ++KE + K PL
Sbjct: 412 IL---------NKGSSSNEKDDVGRRWPKDEVLALINLRCTSVNNNNNNEEKEGNNKVPL 462
Query: 563 WERISQGMLELGYKRSAKKCKEKWENINKYFRKTKDANKKRSLDSKTCPYFHQLNTLYNQ 384
WERISQGM EL YKRSAK+CKEKWENINKYFRKTKD KKRSLDS+TCPYFHQL++LYNQ
Sbjct: 463 WERISQGMSELRYKRSAKRCKEKWENINKYFRKTKDITKKRSLDSRTCPYFHQLSSLYNQ 522
Query: 383 GRLSMPSEGPEN 348
G+L + SE N
Sbjct: 523 GKLVLQSESHLN 534
Score = 77.0 bits (188), Expect = 1e-11
Identities = 36/55 (65%), Positives = 43/55 (78%)
Frame = -1
Query: 1756 EPWLKEEVLALLTIRSSLGIEFSDFIWGHVSRKLAELGFKRSAEKCKEKFEEVSK 1592
+PW +EVL LL IRSS+ F + W HVSR+LAELG+KRSAEKCKEKFEE S+
Sbjct: 95 DPWTTDEVLTLLRIRSSMESWFPELTWEHVSRRLAELGYKRSAEKCKEKFEEESR 149
Score = 60.8 bits (146), Expect = 1e-06
Identities = 30/90 (33%), Positives = 51/90 (56%)
Frame = -3
Query: 653 WPRDEVNSLINLRCNLQTSVDDKESTKAPLWERISQGMLELGYKRSAKKCKEKWENINKY 474
W DEV +L+ +R ++++ + WE +S+ + ELGYKRSA+KCKEK+E ++Y
Sbjct: 97 WTTDEVLTLLRIRSSMESWFPELT------WEHVSRRLAELGYKRSAEKCKEKFEEESRY 150
Query: 473 FRKTKDANKKRSLDSKTCPYFHQLNTLYNQ 384
F + K + + + +L LY+Q
Sbjct: 151 FNNDINYAKNNNNSTSNYRFLSELEQLYHQ 180