BLASTX nr result

ID: Coptis21_contig00000422 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000422
         (1532 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15364.3| unnamed protein product [Vitis vinifera]              254   3e-65
ref|XP_002273441.1| PREDICTED: uncharacterized protein LOC100268...   254   3e-65
ref|XP_002514591.1| zinc finger protein, putative [Ricinus commu...   249   2e-63
emb|CAN63309.1| hypothetical protein VITISV_017174 [Vitis vinifera]   212   2e-52
ref|XP_003635910.1| E3 ubiquitin-protein ligase RNF181 [Medicago...   209   2e-51

>emb|CBI15364.3| unnamed protein product [Vitis vinifera]
          Length = 1427

 Score =  254 bits (650), Expect = 3e-65
 Identities = 120/210 (57%), Positives = 157/210 (74%), Gaps = 5/210 (2%)
 Frame = -2

Query: 958  LCWDCLRLEDSREATNDFYEWEEVDDRADQREVLNMMMDFDERPVSASVEIRELQRVAME 779
            LCWD L+L+D RE TN+ +EWEEVDD  D+REVLNM++  DE      + + E   V + 
Sbjct: 1149 LCWDSLQLDDHRE-TNEDFEWEEVDDVIDEREVLNMVLGPDEEGPIPLLPVGEPVEVDVG 1207

Query: 778  REVVLRNLEWEVLMQVNHVERNAELEHDYE-----HDDFVYPAEYDMLFGQFMENESAIR 614
            RE  + +L+WEVL+ V +++R  E+EHD E     H D++Y +EYDMLFGQF ENE+A+ 
Sbjct: 1208 REENMVSLDWEVLLAVGNLDRTLEIEHDSEPYLADHYDYIYTSEYDMLFGQFAENENALT 1267

Query: 613  GSPPTAKSVVESLPSIVMTQDDIKSKGSLCAVCKDEISTEEQAKLLPCSHFYHGECILPW 434
            G PP +KSVV++LP +V+TQ D+++  +LCAVCKDEI+  E AK LPCSH YHG+CI+PW
Sbjct: 1268 GRPPASKSVVKNLPVVVLTQGDVENNNALCAVCKDEINVGELAKQLPCSHRYHGDCIMPW 1327

Query: 433  LNIRNTCPVCRFELPTDDPDYEQRRTQREG 344
            L IRNTCPVCR+ELPTDDP YEQRR +R G
Sbjct: 1328 LGIRNTCPVCRYELPTDDPQYEQRRNRRAG 1357


>ref|XP_002273441.1| PREDICTED: uncharacterized protein LOC100268065 [Vitis vinifera]
          Length = 439

 Score =  254 bits (650), Expect = 3e-65
 Identities = 120/210 (57%), Positives = 157/210 (74%), Gaps = 5/210 (2%)
 Frame = -2

Query: 958 LCWDCLRLEDSREATNDFYEWEEVDDRADQREVLNMMMDFDERPVSASVEIRELQRVAME 779
           LCWD L+L+D RE TN+ +EWEEVDD  D+REVLNM++  DE      + + E   V + 
Sbjct: 229 LCWDSLQLDDHRE-TNEDFEWEEVDDVIDEREVLNMVLGPDEEGPIPLLPVGEPVEVDVG 287

Query: 778 REVVLRNLEWEVLMQVNHVERNAELEHDYE-----HDDFVYPAEYDMLFGQFMENESAIR 614
           RE  + +L+WEVL+ V +++R  E+EHD E     H D++Y +EYDMLFGQF ENE+A+ 
Sbjct: 288 REENMVSLDWEVLLAVGNLDRTLEIEHDSEPYLADHYDYIYTSEYDMLFGQFAENENALT 347

Query: 613 GSPPTAKSVVESLPSIVMTQDDIKSKGSLCAVCKDEISTEEQAKLLPCSHFYHGECILPW 434
           G PP +KSVV++LP +V+TQ D+++  +LCAVCKDEI+  E AK LPCSH YHG+CI+PW
Sbjct: 348 GRPPASKSVVKNLPVVVLTQGDVENNNALCAVCKDEINVGELAKQLPCSHRYHGDCIMPW 407

Query: 433 LNIRNTCPVCRFELPTDDPDYEQRRTQREG 344
           L IRNTCPVCR+ELPTDDP YEQRR +R G
Sbjct: 408 LGIRNTCPVCRYELPTDDPQYEQRRNRRAG 437


>ref|XP_002514591.1| zinc finger protein, putative [Ricinus communis]
           gi|223546195|gb|EEF47697.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 479

 Score =  249 bits (635), Expect = 2e-63
 Identities = 121/213 (56%), Positives = 156/213 (73%), Gaps = 12/213 (5%)
 Frame = -2

Query: 961 PLCWDCLRLEDSREATNDFYEWEEVDDRADQREVLNMMMDFDERPVSASVEIREL----Q 794
           PLCWD L+LED RE   DF EWEEVD R D+REVL+M +D DE   S S+ I  +     
Sbjct: 257 PLCWDSLQLEDHRENNEDF-EWEEVDGRVDEREVLSMFVD-DEEAASVSLSISPVIAPED 314

Query: 793 RVAMEREVVLRNLEWEVLMQVNHVERNAELEHDY--------EHDDFVYPAEYDMLFGQF 638
            V +ER     NLEWEVL+  N+++ +A+ +HD         +HDD++Y AEY+MLFGQF
Sbjct: 315 MVNVERVGGFGNLEWEVLLNANNLDSHADHDHDDRNAEPYFGDHDDYIYTAEYEMLFGQF 374

Query: 637 MENESAIRGSPPTAKSVVESLPSIVMTQDDIKSKGSLCAVCKDEISTEEQAKLLPCSHFY 458
            ENE+++   PP AKSVVE LPS+V+T++D++S  +LCAVCKDEI+  E+AK LPC+H Y
Sbjct: 375 AENENSLIVRPPAAKSVVEKLPSVVLTKEDVESNNALCAVCKDEINVGEKAKQLPCTHRY 434

Query: 457 HGECILPWLNIRNTCPVCRFELPTDDPDYEQRR 359
           HG+CILPWL IRNTCPVCR+ELPTDD DYE+R+
Sbjct: 435 HGDCILPWLGIRNTCPVCRYELPTDDADYERRK 467


>emb|CAN63309.1| hypothetical protein VITISV_017174 [Vitis vinifera]
          Length = 310

 Score =  212 bits (539), Expect = 2e-52
 Identities = 104/214 (48%), Positives = 138/214 (64%), Gaps = 7/214 (3%)
 Frame = -2

Query: 958 LCWDCLRLEDSREATNDFYEWEEVDDRADQREVLNMMMDFDERPVSASVEIRELQRVAME 779
           L WDCL LED+R    DF EWE+VD+RA  +                  E  E +     
Sbjct: 113 LYWDCLPLEDTRTNNEDF-EWEQVDERASLKXG----------------EEEEEEEAGDG 155

Query: 778 REVVLRNLEWEVLMQVNHVERNAELEHDYE-------HDDFVYPAEYDMLFGQFMENESA 620
           R+   R+L+WEVL+ +N++ER   LEHD +        DD+V   EY  LFG F E+++ 
Sbjct: 156 RDEAARSLDWEVLLAMNNLERTLNLEHDLDIDSFFTDQDDYVNATEYVTLFGLFTEDDAG 215

Query: 619 IRGSPPTAKSVVESLPSIVMTQDDIKSKGSLCAVCKDEISTEEQAKLLPCSHFYHGECIL 440
           ++GSPP AKSVV++LP + +TQ  ++    +CAVCKDEI  EE+ K LPCSH YHG+CI+
Sbjct: 216 LKGSPPAAKSVVQNLPVVELTQQYLEKNNVVCAVCKDEILLEEKVKRLPCSHHYHGDCIV 275

Query: 439 PWLNIRNTCPVCRFELPTDDPDYEQRRTQREGRG 338
           PWL+IRNTCPVCR+ELPTDDP+YE  ++QR GRG
Sbjct: 276 PWLSIRNTCPVCRYELPTDDPEYEHMKSQRTGRG 309


>ref|XP_003635910.1| E3 ubiquitin-protein ligase RNF181 [Medicago truncatula]
           gi|355501845|gb|AES83048.1| E3 ubiquitin-protein ligase
           RNF181 [Medicago truncatula]
          Length = 379

 Score =  209 bits (532), Expect = 2e-51
 Identities = 111/232 (47%), Positives = 151/232 (65%), Gaps = 26/232 (11%)
 Frame = -2

Query: 958 LCWDCLRLEDS-REATNDFYEWEEV-DDRADQREV----LNMMMDFDERPVSASVEIREL 797
           LCWD L LED  R   ND   WEEV + R ++ E+     ++++D  E  V  +VE+ E+
Sbjct: 145 LCWDSLCLEDDHRSVLND---WEEVIEGRVNENEIEEASSSLLIDEVEVDVDVNVEV-EI 200

Query: 796 QRVAMER----------EVVLRNLEWEVLMQVNHVERNAELEHDYEHDDFVYPA------ 665
              +ME           E  LR LEWE+L+  N++ERN  LEH+ E  + +Y A      
Sbjct: 201 DEQSMESGFEGEEDEAGEEALRYLEWEILLAFNNLERNGGLEHEDESLNNLYLAVHDGII 260

Query: 664 ----EYDMLFGQFMENESAIRGSPPTAKSVVESLPSIVMTQDDIKSKGSLCAVCKDEIST 497
               +YD+LFGQ +EN+S ++GSPP AKS VE+LP + +T++++K K  +CAVCKDE++ 
Sbjct: 261 SGNTDYDILFGQLLENDSGLKGSPPAAKSFVENLPLVELTEEELKEKDVVCAVCKDEVTV 320

Query: 496 EEQAKLLPCSHFYHGECILPWLNIRNTCPVCRFELPTDDPDYEQRRTQREGR 341
           EE+   LPCSH YHG+CILPWLNIRNTCPVCR+ELPTDD DYEQ + +R  R
Sbjct: 321 EEKVGKLPCSHCYHGDCILPWLNIRNTCPVCRYELPTDDDDYEQSKVRRVAR 372


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