BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000417
         (1275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270966.2| PREDICTED: histone deacetylase HDT1-like [Vi...   229   1e-57
gb|ACZ54947.1| type 2 histone deacetylase c [Nicotiana tabacum]       189   2e-45
ref|XP_002277422.1| PREDICTED: histone deacetylase HDT1-like [Vi...   183   7e-44
ref|XP_002528582.1| Histone deacetylase 2a, putative [Ricinus co...   176   2e-41
gb|ACF81501.1| unknown [Zea mays] gi|413950328|gb|AFW82977.1| hi...   165   3e-38

>ref|XP_002270966.2| PREDICTED: histone deacetylase HDT1-like [Vitis vinifera]
          Length = 300

 Score =  229 bits (583), Expect = 1e-57
 Identities = 134/310 (43%), Positives = 173/310 (55%), Gaps = 10/310 (3%)
 Frame = +1

Query: 64  MEFWGIEXXXXXXXXXXXXXXXXLCLSNACLGEVKKTKGSHRAHIFLTVNDQKLVIGTIS 243
           MEFWG+E                L LS A LGE KK KG+    +FL ++ QKLV+GT+ 
Sbjct: 1   MEFWGVEVKAGESFKVKSEDDKILHLSQAALGESKKEKGNESVPLFLKIDQQKLVLGTLL 60

Query: 244 PEK-PQISYEMKIPKDFELSHDWKNGSIYFTGYKSSDGSYEDHTDCDH-DAGCDHPVAAT 417
           P   PQ+S+++   K+FELSH+WKNGS++F GYKS     E+ ++ D  D+  D PV A 
Sbjct: 61  PANIPQLSFDLVFDKEFELSHNWKNGSVFFMGYKSVLPDEEEFSEFDDSDSEEDLPVNAI 120

Query: 418 ENGKPEPKNEKSNI------STQIKLTIREPNKXXXXXXXXXXXXXXXXXXXXXXQIXXX 579
           ENGKPEPK E++        + + K+ + EP K                      +    
Sbjct: 121 ENGKPEPKVEQAKAVPTNANAGKAKVKVEEPPKDAKDEEDDDDDSDEDMVDEDSDE---- 176

Query: 580 XXXXXXXXXXXXXXXXXXXXXXXXXXEETPKKLL--GTKRPAQSASKTPIPEKKAKLVTP 753
                                     EETPKK +  G KRP +SA+KTP+P KKAKLV+P
Sbjct: 177 ----DSDEDIMSDAEDGSDEGSESEDEETPKKKVEPGKKRPTESATKTPVPAKKAKLVSP 232

Query: 754 QKTGKTGPEGKKVGGHTATPHPSKKSGKTSINNDNSKQKTPKSSGQIPCKSCSKTFNSDT 933
           QKT     +GKK G HTATPHP+KK+GKT  + D  K ++PKS GQ+ CKSCSKTFNS+ 
Sbjct: 233 QKT-----DGKKGGAHTATPHPNKKAGKTPASGDKGKGQSPKSGGQVSCKSCSKTFNSEN 287

Query: 934 ALQSHSKAKH 963
           ALQSHSKAKH
Sbjct: 288 ALQSHSKAKH 297


>gb|ACZ54947.1| type 2 histone deacetylase c [Nicotiana tabacum]
          Length = 282

 Score =  189 bits (479), Expect = 2e-45
 Identities = 122/307 (39%), Positives = 160/307 (52%), Gaps = 3/307 (0%)
 Frame = +1

Query: 64  MEFWGIEXXXXXXXXXXXXXXXXLCLSNACLGEVKKTKGSHRAHIFLTVNDQKLVIGTIS 243
           MEFWG E                L LS A LGE KK KGS    + + V+ +KL +GT++
Sbjct: 1   MEFWGAEVKSGQPLTVQPGDDMVLHLSQASLGEAKKDKGSEPVCLSVNVDGKKLALGTLN 60

Query: 244 PEK-PQISYEMKIPKDFELSHDWKNGSIYFTGYKSSDGSYEDHTDCDHDAGCDHPVAATE 420
            +K PQ  +++   +DFELSH+WKNGS+YF GYK+++  YE   D D ++  + P+    
Sbjct: 61  LDKLPQQQFDLVFDRDFELSHNWKNGSVYFFGYKAAN-PYEQEEDED-ESDEEIPLTLAN 118

Query: 421 NGKPEPK-NEKSNISTQIKLTIREPNKXXXXXXXXXXXXXXXXXXXXXXQIXXXXXXXXX 597
            GK E K +   + S + K+ I EP+K                                 
Sbjct: 119 TGKSEAKASANDSASGKQKVKIAEPSKDAKADDEDDSSDEDDTSEDEEDS---------- 168

Query: 598 XXXXXXXXXXXXXXXXXXXXEETPKKLLGTK-RPAQSASKTPIPEKKAKLVTPQKTGKTG 774
                               EETPKK   +K RP+ SA KTP P+KKAK  TPQKT    
Sbjct: 169 -----EMGEDEDDSDEDQSDEETPKKAEPSKKRPSDSAIKTPAPDKKAKFATPQKT---- 219

Query: 775 PEGKKVGGHTATPHPSKKSGKTSINNDNSKQKTPKSSGQIPCKSCSKTFNSDTALQSHSK 954
            +GKK   H ATPHPSK++GKTS N  N   +TPKS G + CK+CS+TF S+TAL+SHSK
Sbjct: 220 -DGKKGAVHVATPHPSKQAGKTSGNKSN---QTPKSGGSLACKTCSRTFGSETALESHSK 275

Query: 955 AKHSEDK 975
           AKHS  K
Sbjct: 276 AKHSVGK 282


>ref|XP_002277422.1| PREDICTED: histone deacetylase HDT1-like [Vitis vinifera]
          Length = 307

 Score =  183 bits (465), Expect = 7e-44
 Identities = 115/317 (36%), Positives = 156/317 (49%), Gaps = 13/317 (4%)
 Frame = +1

Query: 64  MEFWGIEXXXXXXXXXXXXXXXXLCLSNACLGEVKKTKGSHRAHIFLTVNDQKLVIGTIS 243
           MEFWG+E                + +S A LGE+KK KG+    ++  +  QKLV+GT+S
Sbjct: 1   MEFWGVEVKAGEPLEVVPGDDMLVHISQASLGEIKKDKGNELVCLYANIGGQKLVLGTLS 60

Query: 244 PEK-PQISYEMKIPKDFELSHDWKNGSIYFTGYKSS--DGSYEDHTDCDHDAGCDHPVAA 414
            EK PQIS+++   K FELSH+WKNGS+YF GYK++  D   E   D  H+   D     
Sbjct: 61  AEKFPQISFDLVFEKKFELSHNWKNGSVYFCGYKAAIPDSDSEFEIDLPHNTTVD----- 115

Query: 415 TENGKPEP-KNEKSNISTQIKLTIREPNKXXXXXXXXXXXXXXXXXXXXXXQIXXXXXXX 591
             NGKP+  K EK   +   ++ I EPNK                      +        
Sbjct: 116 --NGKPQQLKQEKPESAAAKQVKIVEPNKDAKSPKENDDDSDKDSDESMDDEDESSEDED 173

Query: 592 XXXXXXXXXXXXXXXXXXXXXXEETP-KKLLGTKRPAQSASKTP--------IPEKKAKL 744
                                 ++    K   T + A  + K P        +P+KKAK 
Sbjct: 174 MVNDRSASSEDEDDDENEDNEDDKNEISKKKETPKKAGPSKKRPTESVSKTPVPDKKAKF 233

Query: 745 VTPQKTGKTGPEGKKVGGHTATPHPSKKSGKTSINNDNSKQKTPKSSGQIPCKSCSKTFN 924
           VTPQ   KTG + KK GGH ATP+PSK++GKT  N +  KQ+  KS G   CKSC+++FN
Sbjct: 234 VTPQ---KTGDDDKKSGGHVATPYPSKQAGKTPANTEKPKQQVQKSGGSFSCKSCNRSFN 290

Query: 925 SDTALQSHSKAKHSEDK 975
           S+ ALQSH+KAKH+  K
Sbjct: 291 SENALQSHTKAKHTAAK 307


>ref|XP_002528582.1| Histone deacetylase 2a, putative [Ricinus communis]
           gi|223531978|gb|EEF33790.1| Histone deacetylase 2a,
           putative [Ricinus communis]
          Length = 287

 Score =  176 bits (445), Expect = 2e-41
 Identities = 110/280 (39%), Positives = 143/280 (51%), Gaps = 2/280 (0%)
 Frame = +1

Query: 133 LCLSNACLGEVKKTKGSHRAHIFLTVNDQKLVIGTISPEK-PQISYEMKIPKDFELSHDW 309
           L LS ACLGEVKK KG+    + + +ND+K+V+GT+S EK P +S+++   ++FELSH+W
Sbjct: 39  LHLSQACLGEVKKNKGNEPVFVSVKINDKKIVLGTLSCEKFPHLSFDLIFDQNFELSHNW 98

Query: 310 KNGSIYFTGYKSSDGSYEDHTDCDHDAGCDHPVAATENGKPEPKNEKSNISTQIKLTIRE 489
           K+GS+YF+    S+                 P   TE  KP+    K       K+ I E
Sbjct: 99  KHGSVYFSEKPGSETK--------------KPQPETEKAKPDSTGSKQ------KVKIAE 138

Query: 490 PNKXXXXXXXXXXXXXXXXXXXXXXQIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEETP 669
           P K                                                     EETP
Sbjct: 139 PKKDEKPDNDSDDSTADEDE-----SFDEDDSSDDKVLYDGEDEDSDESDDSSDEDEETP 193

Query: 670 KKL-LGTKRPAQSASKTPIPEKKAKLVTPQKTGKTGPEGKKVGGHTATPHPSKKSGKTSI 846
           K +  G KRPA+SA KTP+P+KK KLVTPQKT     +GKK  GH ATPHPSKK  KT  
Sbjct: 194 KTIEKGKKRPAESAKKTPLPDKKVKLVTPQKT-----DGKKASGHVATPHPSKKILKTPA 248

Query: 847 NNDNSKQKTPKSSGQIPCKSCSKTFNSDTALQSHSKAKHS 966
           ++D  K++T KS    PC SC++ F S+ ALQSHSKAKHS
Sbjct: 249 SSDQKKEQTQKS---FPCTSCNRAFGSEAALQSHSKAKHS 285


>gb|ACF81501.1| unknown [Zea mays] gi|413950328|gb|AFW82977.1| histone deacetylase
           HDT2 [Zea mays]
          Length = 303

 Score =  165 bits (417), Expect = 3e-38
 Identities = 120/313 (38%), Positives = 154/313 (49%), Gaps = 13/313 (4%)
 Frame = +1

Query: 64  MEFWGIEXXXXXXXXXXXXXXXXLCLSNACLGEVKKTKGSHRAHIFLTVNDQKLVIGTIS 243
           MEFWG+E                L +S A LGE KK   S  A +++ V+D+KL IGT+S
Sbjct: 1   MEFWGLEVKPGSTVKCEPGHGFILHVSQAALGESKK---SDSALMYVKVDDKKLAIGTLS 57

Query: 244 PEK-PQISYEMKIPKDFELSHDWKNGSIYFTGYKSSDGSYEDHTDCD---HDAGCDHPVA 411
            +K PQI +++   K+FELSH  K  S++F+GYK       D  D D    +   + PV 
Sbjct: 58  IDKYPQIQFDLVFNKEFELSHTSKTTSVFFSGYKVEQPIEGDEMDLDSEDEEEELNIPVI 117

Query: 412 ATE---NGKPEPKN-EKSNISTQIKLTIREPNKXXXXXXXXXXXXXXXXXXXXXXQIXXX 579
                 +GK E KN EK+  +T  K ++    K                           
Sbjct: 118 KENGKADGKEEQKNQEKAVAATASKSSLGLEKKSKDDSDDSDEDESDDSDEDDSDD---S 174

Query: 580 XXXXXXXXXXXXXXXXXXXXXXXXXXEETP---KKLLGTKRPAQSASKTPIPEKKAKLVT 750
                                     EETP   K   G KR A++A KTP+ +KKAK+ T
Sbjct: 175 DEGEGLSPDEGDDDSSDEDDTSDDDEEETPTPKKPEAGKKRGAENALKTPLSDKKAKVAT 234

Query: 751 P--QKTGKTGPEGKKVGGHTATPHPSKKSGKTSINNDNSKQKTPKSSGQIPCKSCSKTFN 924
           P  QKTG     GKK   H ATPHP+K  GKT  NND S +K+PKS G +PCKSCSKTFN
Sbjct: 235 PPAQKTG-----GKKGATHVATPHPAK--GKTPANNDKSTEKSPKSGGSVPCKSCSKTFN 287

Query: 925 SDTALQSHSKAKH 963
           S+ ALQ+HSKAKH
Sbjct: 288 SEMALQAHSKAKH 300