BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000413
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509531.1| chloride channel clc, putative [Ricinus comm...    85   7e-15
ref|NP_001236494.1| chloride channel [Glycine max] gi|66220164|g...    79   3e-13
ref|XP_002300101.1| Cl-channel clc-7 [Populus trichocarpa] gi|22...    79   5e-13
ref|XP_002868624.1| ATCLC-A [Arabidopsis lyrata subsp. lyrata] g...    78   9e-13
gb|AAD29679.1|AF133209_1 CLC-Nt2 protein [Nicotiana tabacum]           77   1e-12

>ref|XP_002509531.1| chloride channel clc, putative [Ricinus communis]
           gi|223549430|gb|EEF50918.1| chloride channel clc,
           putative [Ricinus communis]
          Length = 787

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 41/63 (65%), Positives = 51/63 (80%)
 Frame = +2

Query: 215 DNYSNLCKDSTKAHYMEGEEAEENDPESNSLQQPLLKRNRTLSSNPLAMVGSKVSHMESL 394
           ++ S L + +   H ME  + EE DPESNSLQQPLLKRNRTLSS+PLA+VG+KVS++ESL
Sbjct: 3   EDSSQLAEATAPPHTMEASQEEERDPESNSLQQPLLKRNRTLSSSPLAIVGAKVSYIESL 62

Query: 395 DYE 403
           DYE
Sbjct: 63  DYE 65


>ref|NP_001236494.1| chloride channel [Glycine max] gi|66220164|gb|AAY43007.1| chloride
           channel [Glycine max]
          Length = 783

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 42/65 (64%), Positives = 50/65 (76%), Gaps = 1/65 (1%)
 Frame = +2

Query: 212 MDNYSNLCKDSTKAHYMEG-EEAEENDPESNSLQQPLLKRNRTLSSNPLAMVGSKVSHME 388
           M   S+L K+ST  +     EE EE DPESN L +PLLKRNRTLSSNPLA+VG+KVS++E
Sbjct: 1   MGEESSLLKESTSINDTNMVEEVEERDPESNPLNEPLLKRNRTLSSNPLALVGAKVSYIE 60

Query: 389 SLDYE 403
           SLDYE
Sbjct: 61  SLDYE 65


>ref|XP_002300101.1| Cl-channel clc-7 [Populus trichocarpa] gi|222847359|gb|EEE84906.1|
           Cl-channel clc-7 [Populus trichocarpa]
          Length = 785

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 41/64 (64%), Positives = 50/64 (78%)
 Frame = +2

Query: 212 MDNYSNLCKDSTKAHYMEGEEAEENDPESNSLQQPLLKRNRTLSSNPLAMVGSKVSHMES 391
           M+  S+   ++T  H +E  E E  DPESN+L QPLLKRNRTLSSNPLA+VG+KVSH+ES
Sbjct: 1   MEADSSQLAEATAGHNLEVGE-EGRDPESNTLHQPLLKRNRTLSSNPLALVGAKVSHIES 59

Query: 392 LDYE 403
           LDYE
Sbjct: 60  LDYE 63


>ref|XP_002868624.1| ATCLC-A [Arabidopsis lyrata subsp. lyrata]
           gi|297314460|gb|EFH44883.1| ATCLC-A [Arabidopsis lyrata
           subsp. lyrata]
          Length = 776

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 41/64 (64%), Positives = 50/64 (78%)
 Frame = +2

Query: 212 MDNYSNLCKDSTKAHYMEGEEAEENDPESNSLQQPLLKRNRTLSSNPLAMVGSKVSHMES 391
           MD   NL    + ++Y  GEE EE DPE+N+L QPLLKR+RTLSS PLA+VG+KVSH+ES
Sbjct: 1   MDEDGNL--QISNSNY-NGEEEEEGDPENNTLNQPLLKRHRTLSSTPLALVGAKVSHIES 57

Query: 392 LDYE 403
           LDYE
Sbjct: 58  LDYE 61


>gb|AAD29679.1|AF133209_1 CLC-Nt2 protein [Nicotiana tabacum]
          Length = 786

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 40/65 (61%), Positives = 53/65 (81%), Gaps = 1/65 (1%)
 Frame = +2

Query: 212 MDNYSNLCKDSTKAHYMEGEE-AEENDPESNSLQQPLLKRNRTLSSNPLAMVGSKVSHME 388
           M+  + L +++T  + M+G++  EE DPESNSL QPLLKRNRTLSS+P A+VG+KVSH+E
Sbjct: 1   MEEPTRLVEEAT-INNMDGQQNEEERDPESNSLHQPLLKRNRTLSSSPFALVGAKVSHIE 59

Query: 389 SLDYE 403
           SLDYE
Sbjct: 60  SLDYE 64