BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000411
         (2246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514395.1| conserved hypothetical protein [Ricinus comm...   163   1e-60
ref|NP_974253.1| methyl-CpG-binding domain protein 4 [Arabidopsi...   156   9e-60
gb|AAF21203.1|AC013483_27 hypothetical protein [Arabidopsis thal...   156   9e-60
gb|AAO22623.1| unknown protein [Arabidopsis thaliana]                 156   1e-59
ref|XP_002882558.1| hypothetical protein ARALYDRAFT_896965 [Arab...   155   8e-58

>ref|XP_002514395.1| conserved hypothetical protein [Ricinus communis]
           gi|223546492|gb|EEF47991.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 608

 Score =  163 bits (412), Expect(2) = 1e-60
 Identities = 77/98 (78%), Positives = 82/98 (83%)
 Frame = -3

Query: 597 QARRVISDLFELCPDAKTATEVVTEDIEKVIKSLGLFRKRAQMIQRLSQEYLEDGWTHVT 418
           Q R VISD F LCPDAK ATE  TE+IEK+I  LGL +KRA MIQRLSQEYL D WTHVT
Sbjct: 504 QVRGVISDFFTLCPDAKAATEAKTEEIEKIIVPLGLQKKRAVMIQRLSQEYLADDWTHVT 563

Query: 417 QLHGVGKYAADAYAIFCTGKWDRVKPMDHKLNEYWDFL 304
           QLHGVGKYAADAYAIFCTGKWD+V+P DH LN YWDFL
Sbjct: 564 QLHGVGKYAADAYAIFCTGKWDQVRPKDHMLNYYWDFL 601



 Score = 99.0 bits (245), Expect(2) = 1e-60
 Identities = 52/88 (59%), Positives = 60/88 (68%), Gaps = 5/88 (5%)
 Frame = -1

Query: 899 EQGETLDDNSVESK----KRNTCRKCPI-KSPVLSVAQKRDEAYRRKDPDNTWKPPPSKI 735
           E+ E  D N +++K    K    +K P  KS  LS A+KR EAYRRK PDNTWKPP S  
Sbjct: 417 EEEEAADSNMIDNKHGQKKLPEKKKRPARKSITLSAAEKRSEAYRRKTPDNTWKPPRSDF 476

Query: 734 GLLQEPHFSDPWRVLIICLLLNRTTGTQ 651
           GLLQE H SDPWRVL+IC+LLN TTG Q
Sbjct: 477 GLLQEDHASDPWRVLVICMLLNCTTGKQ 504


>ref|NP_974253.1| methyl-CpG-binding domain protein 4 [Arabidopsis thaliana]
           gi|114050633|gb|ABI49466.1| At3g07930 [Arabidopsis
           thaliana] gi|332641100|gb|AEE74621.1| methyl-CpG-binding
           domain protein 4 [Arabidopsis thaliana]
          Length = 445

 Score =  156 bits (395), Expect(2) = 9e-60
 Identities = 74/98 (75%), Positives = 81/98 (82%)
 Frame = -3

Query: 597 QARRVISDLFELCPDAKTATEVVTEDIEKVIKSLGLFRKRAQMIQRLSQEYLEDGWTHVT 418
           Q R VISDLF LC DAKTATEV  E+IE +IK LGL +KR +MIQRLS EYL++ WTHVT
Sbjct: 342 QTRGVISDLFGLCTDAKTATEVKEEEIENLIKPLGLQKKRTKMIQRLSLEYLQESWTHVT 401

Query: 417 QLHGVGKYAADAYAIFCTGKWDRVKPMDHKLNEYWDFL 304
           QLHGVGKYAADAYAIFC G WDRVKP DH LN YWD+L
Sbjct: 402 QLHGVGKYAADAYAIFCNGNWDRVKPNDHMLNYYWDYL 439



 Score =  102 bits (255), Expect(2) = 9e-60
 Identities = 54/127 (42%), Positives = 70/127 (55%)
 Frame = -1

Query: 1031 KEVHLRVVSPYFLQSXXXXXXXXXXXXXXXXXXXKAPSVYLSNSEQGETLDDNSVESKKR 852
            ++V +R VSPYF +S                      S Y       + +  N  + +K 
Sbjct: 220  RQVKVRRVSPYFQESTVSEQPNQAPKGLRNYFKVVKVSRYF----HADGIQVNESQKEKS 275

Query: 851  NTCRKCPIKSPVLSVAQKRDEAYRRKDPDNTWKPPPSKIGLLQEPHFSDPWRVLIICLLL 672
               RK PI SPVLS++QK D+ Y RK PDNTW PP S   LLQE H+ DPWRVL+IC+LL
Sbjct: 276  RNVRKTPIVSPVLSLSQKTDDVYLRKTPDNTWVPPRSPCNLLQEDHWHDPWRVLVICMLL 335

Query: 671  NRTTGTQ 651
            N+T+G Q
Sbjct: 336  NKTSGAQ 342


>gb|AAF21203.1|AC013483_27 hypothetical protein [Arabidopsis thaliana]
          Length = 419

 Score =  156 bits (395), Expect(2) = 9e-60
 Identities = 74/98 (75%), Positives = 81/98 (82%)
 Frame = -3

Query: 597 QARRVISDLFELCPDAKTATEVVTEDIEKVIKSLGLFRKRAQMIQRLSQEYLEDGWTHVT 418
           Q R VISDLF LC DAKTATEV  E+IE +IK LGL +KR +MIQRLS EYL++ WTHVT
Sbjct: 316 QTRGVISDLFGLCTDAKTATEVKEEEIENLIKPLGLQKKRTKMIQRLSLEYLQESWTHVT 375

Query: 417 QLHGVGKYAADAYAIFCTGKWDRVKPMDHKLNEYWDFL 304
           QLHGVGKYAADAYAIFC G WDRVKP DH LN YWD+L
Sbjct: 376 QLHGVGKYAADAYAIFCNGNWDRVKPNDHMLNYYWDYL 413



 Score =  102 bits (255), Expect(2) = 9e-60
 Identities = 54/127 (42%), Positives = 70/127 (55%)
 Frame = -1

Query: 1031 KEVHLRVVSPYFLQSXXXXXXXXXXXXXXXXXXXKAPSVYLSNSEQGETLDDNSVESKKR 852
            ++V +R VSPYF +S                      S Y       + +  N  + +K 
Sbjct: 194  RQVKVRRVSPYFQESTVSEQPNQAPKGLRNYFKVVKVSRYF----HADGIQVNESQKEKS 249

Query: 851  NTCRKCPIKSPVLSVAQKRDEAYRRKDPDNTWKPPPSKIGLLQEPHFSDPWRVLIICLLL 672
               RK PI SPVLS++QK D+ Y RK PDNTW PP S   LLQE H+ DPWRVL+IC+LL
Sbjct: 250  RNVRKTPIVSPVLSLSQKTDDVYLRKTPDNTWVPPRSPCNLLQEDHWHDPWRVLVICMLL 309

Query: 671  NRTTGTQ 651
            N+T+G Q
Sbjct: 310  NKTSGAQ 316


>gb|AAO22623.1| unknown protein [Arabidopsis thaliana]
          Length = 407

 Score =  156 bits (395), Expect(2) = 1e-59
 Identities = 74/98 (75%), Positives = 81/98 (82%)
 Frame = -3

Query: 597 QARRVISDLFELCPDAKTATEVVTEDIEKVIKSLGLFRKRAQMIQRLSQEYLEDGWTHVT 418
           Q R VISDLF LC DAKTATEV  E+IE +IK LGL +KR +MIQRLS EYL++ WTHVT
Sbjct: 304 QTRGVISDLFGLCTDAKTATEVKEEEIENLIKPLGLQKKRTKMIQRLSLEYLQESWTHVT 363

Query: 417 QLHGVGKYAADAYAIFCTGKWDRVKPMDHKLNEYWDFL 304
           QLHGVGKYAADAYAIFC G WDRVKP DH LN YWD+L
Sbjct: 364 QLHGVGKYAADAYAIFCNGNWDRVKPNDHMLNYYWDYL 401



 Score =  102 bits (253), Expect(2) = 1e-59
 Identities = 54/127 (42%), Positives = 69/127 (54%)
 Frame = -1

Query: 1031 KEVHLRVVSPYFLQSXXXXXXXXXXXXXXXXXXXKAPSVYLSNSEQGETLDDNSVESKKR 852
            ++V  R VSPYF +S                      S Y       + +  N  + +K 
Sbjct: 182  RQVKARRVSPYFQESTVSEQPNQAPKGLRNYFKVVKVSRYF----HADGIQVNESQKEKS 237

Query: 851  NTCRKCPIKSPVLSVAQKRDEAYRRKDPDNTWKPPPSKIGLLQEPHFSDPWRVLIICLLL 672
               RK PI SPVLS++QK D+ Y RK PDNTW PP S   LLQE H+ DPWRVL+IC+LL
Sbjct: 238  RNVRKTPIVSPVLSLSQKTDDVYLRKTPDNTWVPPRSPCNLLQEDHWHDPWRVLVICMLL 297

Query: 671  NRTTGTQ 651
            N+T+G Q
Sbjct: 298  NKTSGAQ 304


>ref|XP_002882558.1| hypothetical protein ARALYDRAFT_896965 [Arabidopsis lyrata subsp.
           lyrata] gi|297328398|gb|EFH58817.1| hypothetical protein
           ARALYDRAFT_896965 [Arabidopsis lyrata subsp. lyrata]
          Length = 435

 Score =  155 bits (392), Expect(2) = 8e-58
 Identities = 72/98 (73%), Positives = 80/98 (81%)
 Frame = -3

Query: 597 QARRVISDLFELCPDAKTATEVVTEDIEKVIKSLGLFRKRAQMIQRLSQEYLEDGWTHVT 418
           Q R VI DLF LCPDAKTATEV   +IE +IK LGL +KRA+MIQR S EYL++ WTHVT
Sbjct: 332 QTRGVIEDLFALCPDAKTATEVEEREIESLIKPLGLQKKRARMIQRFSLEYLQESWTHVT 391

Query: 417 QLHGVGKYAADAYAIFCTGKWDRVKPMDHKLNEYWDFL 304
           QLHG+GKYAADAYAIFC G WDRVKP DH LN YW+FL
Sbjct: 392 QLHGIGKYAADAYAIFCNGNWDRVKPDDHMLNYYWEFL 429



 Score = 97.4 bits (241), Expect(2) = 8e-58
 Identities = 69/227 (30%), Positives = 100/227 (44%), Gaps = 1/227 (0%)
 Frame = -1

Query: 1328 QVLLPVVSPYFHQSATTKLCDQEVGVKDSNKDVVALEKLKSPKRKSGIKASS-YLRKNDS 1152
            Q  +P+VSPYF  S  ++     V    S K+     +  S KR++ ++  S Y +++  
Sbjct: 170  QAKVPIVSPYFQSSTISQCGSDIVSSSQSGKNY----RRGSSKRQAKVRRDSPYFQESTV 225

Query: 1151 KESLSYSNPIHNGVDEKEMRQEMEQPKEEKILHSKRKKKVKEVHLRVVSPYFLQSXXXXX 972
             E  S + P       +++RQ  +  K                    VS YF        
Sbjct: 226  SEQPSQAPP-------RDLRQYFKVVK--------------------VSRYF-------- 250

Query: 971  XXXXXXXXXXXXXXKAPSVYLSNSEQGETLDDNSVESKKRNTCRKCPIKSPVLSVAQKRD 792
                                       + +  N  + +K    RK P+ SP LS++QK D
Sbjct: 251  -------------------------HADGIQVNESQKEKSTRVRKTPVVSPSLSLSQKTD 285

Query: 791  EAYRRKDPDNTWKPPPSKIGLLQEPHFSDPWRVLIICLLLNRTTGTQ 651
            EAY+RK PD TW PP S   LLQE H+ DPWRVL+IC+LLN+T+G Q
Sbjct: 286  EAYQRKTPDKTWVPPRSPCNLLQEHHWHDPWRVLVICMLLNKTSGAQ 332