BLASTX nr result

ID: Coptis21_contig00000390 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000390
         (1391 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEP17007.1| UDP-D-apiose/UPD-D-xylose synthetase [Vitis vinif...   528   e-175
ref|XP_002266630.1| PREDICTED: bifunctional polymyxin resistance...   528   e-175
ref|XP_003540213.1| PREDICTED: bifunctional polymyxin resistance...   531   e-175
ref|NP_563807.1| UDP-apiose/xylose synthase [Arabidopsis thalian...   529   e-174
ref|XP_002892446.1| UDP-D-apiose/UDP-D-xylose synthase 2 [Arabid...   529   e-174

>gb|AEP17007.1| UDP-D-apiose/UPD-D-xylose synthetase [Vitis vinifera]
          Length = 388

 Score =  528 bits (1361), Expect(2) = e-175
 Identities = 251/273 (91%), Positives = 266/273 (97%)
 Frame = +3

Query: 249  FIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPADHPLRQDPEFYVLKEDSSPCIFG 428
            FIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLP D PLRQDP +Y+LKED+SPCIFG
Sbjct: 116  FIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYLLKEDASPCIFG 175

Query: 429  SIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGVDGPSEGVPRV 608
            SIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPG+DGPSEGVPRV
Sbjct: 176  SIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRV 235

Query: 609  LACFSNNLLRGEPLKLVDGGQSQRTFVYIKDAIEAVMLMIENPARANGHIFNVGNPNNEV 788
            LACFSNNLLR EPLKLVDGGQSQRTFVYIKDAIEAV+LMI+NP RANGHIFNVGNPNNE 
Sbjct: 236  LACFSNNLLRHEPLKLVDGGQSQRTFVYIKDAIEAVLLMIDNPGRANGHIFNVGNPNNEA 295

Query: 789  TVKQLAEMMTEVFSKVSGEPAIEVPTIDVSSKEFYGEGYDDSDKRIPDMTIINRQLGWNP 968
            TVKQLAEMMTEV++KVSGEP++EVPT+DVSSKEFYGEGYDDSDKRIPDMTIIN+QLGWNP
Sbjct: 296  TVKQLAEMMTEVYAKVSGEPSLEVPTVDVSSKEFYGEGYDDSDKRIPDMTIINKQLGWNP 355

Query: 969  KTSLWDLLESTLTYQHRTYAEAVKKAIAKPAAT 1067
            KTSLWDLLESTLTYQHRTYAEA+K+AIAKP A+
Sbjct: 356  KTSLWDLLESTLTYQHRTYAEAIKEAIAKPVAS 388



 Score =  115 bits (288), Expect(2) = e-175
 Identities = 54/59 (91%), Positives = 57/59 (96%)
 Frame = +2

Query: 2   TYQDRIHFHRINIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPV 178
           ++ DRI FHRINIKHDSRLEGLIKMADLT+NLAAICTPADYNTRPLDTIYSNFIDALPV
Sbjct: 64  SWSDRIQFHRINIKHDSRLEGLIKMADLTVNLAAICTPADYNTRPLDTIYSNFIDALPV 122


>ref|XP_002266630.1| PREDICTED: bifunctional polymyxin resistance protein ArnA [Vitis
            vinifera] gi|296087442|emb|CBI34031.3| unnamed protein
            product [Vitis vinifera]
          Length = 388

 Score =  528 bits (1361), Expect(2) = e-175
 Identities = 251/273 (91%), Positives = 266/273 (97%)
 Frame = +3

Query: 249  FIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPADHPLRQDPEFYVLKEDSSPCIFG 428
            FIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLP D PLRQDP +Y+LKED+SPCIFG
Sbjct: 116  FIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYLLKEDASPCIFG 175

Query: 429  SIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGVDGPSEGVPRV 608
            SIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPG+DGPSEGVPRV
Sbjct: 176  SIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRV 235

Query: 609  LACFSNNLLRGEPLKLVDGGQSQRTFVYIKDAIEAVMLMIENPARANGHIFNVGNPNNEV 788
            LACFSNNLLR EPLKLVDGGQSQRTFVYIKDAIEAV+LMI+NP RANGHIFNVGNPNNE 
Sbjct: 236  LACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIDNPGRANGHIFNVGNPNNEA 295

Query: 789  TVKQLAEMMTEVFSKVSGEPAIEVPTIDVSSKEFYGEGYDDSDKRIPDMTIINRQLGWNP 968
            TVKQLAEMMTEV++KVSGEP++EVPT+DVSSKEFYGEGYDDSDKRIPDMTIIN+QLGWNP
Sbjct: 296  TVKQLAEMMTEVYAKVSGEPSLEVPTVDVSSKEFYGEGYDDSDKRIPDMTIINKQLGWNP 355

Query: 969  KTSLWDLLESTLTYQHRTYAEAVKKAIAKPAAT 1067
            KTSLWDLLESTLTYQHRTYAEA+K+AIAKP A+
Sbjct: 356  KTSLWDLLESTLTYQHRTYAEAIKQAIAKPVAS 388



 Score =  115 bits (287), Expect(2) = e-175
 Identities = 54/58 (93%), Positives = 56/58 (96%)
 Frame = +2

Query: 5   YQDRIHFHRINIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPV 178
           + DRI FHRINIKHDSRLEGLIKMADLT+NLAAICTPADYNTRPLDTIYSNFIDALPV
Sbjct: 65  WSDRIQFHRINIKHDSRLEGLIKMADLTVNLAAICTPADYNTRPLDTIYSNFIDALPV 122


>ref|XP_003540213.1| PREDICTED: bifunctional polymyxin resistance protein ArnA-like
            [Glycine max]
          Length = 387

 Score =  531 bits (1367), Expect(2) = e-175
 Identities = 255/273 (93%), Positives = 264/273 (96%)
 Frame = +3

Query: 249  FIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPADHPLRQDPEFYVLKEDSSPCIFG 428
            FIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLP D PLRQDP +YVLKED SPCIFG
Sbjct: 115  FIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDESPCIFG 174

Query: 429  SIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGVDGPSEGVPRV 608
            SIEKQRWSYACAKQLIERL+YAEGAENGLEFTIVRPFNWIGPRMDFIPG+DGPSEGVPRV
Sbjct: 175  SIEKQRWSYACAKQLIERLVYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRV 234

Query: 609  LACFSNNLLRGEPLKLVDGGQSQRTFVYIKDAIEAVMLMIENPARANGHIFNVGNPNNEV 788
            LACFSNNLLRGEPLKLVDGGQSQRTFVYIKDAIEAV+LMIENPARANGHIFNVGNPNNEV
Sbjct: 235  LACFSNNLLRGEPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEV 294

Query: 789  TVKQLAEMMTEVFSKVSGEPAIEVPTIDVSSKEFYGEGYDDSDKRIPDMTIINRQLGWNP 968
            TV+QLAEMMT+V+SKVSGE  +E PTIDVSSKEFYGEGYDDSDKRIPDMTIINRQLGWNP
Sbjct: 295  TVRQLAEMMTQVYSKVSGEAPLEKPTIDVSSKEFYGEGYDDSDKRIPDMTIINRQLGWNP 354

Query: 969  KTSLWDLLESTLTYQHRTYAEAVKKAIAKPAAT 1067
            KTSLWDLLESTLTYQHRTYAEAVKK IAKP A+
Sbjct: 355  KTSLWDLLESTLTYQHRTYAEAVKKVIAKPVAS 387



 Score =  110 bits (276), Expect(2) = e-175
 Identities = 52/58 (89%), Positives = 55/58 (94%)
 Frame = +2

Query: 5   YQDRIHFHRINIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPV 178
           +  RI FHR+NIKHDSRLEGLIKM+DLTINLAAICTPADYNTRPLDTIYSNFIDALPV
Sbjct: 64  WASRIQFHRLNIKHDSRLEGLIKMSDLTINLAAICTPADYNTRPLDTIYSNFIDALPV 121


>ref|NP_563807.1| UDP-apiose/xylose synthase [Arabidopsis thaliana]
            gi|6579211|gb|AAF18254.1|AC011438_16 T23G18.6
            [Arabidopsis thaliana] gi|24899785|gb|AAN65107.1| similar
            to dihydroflavonol reductase [Arabidopsis thaliana]
            gi|332190139|gb|AEE28260.1| UDP-apiose/xylose synthase
            [Arabidopsis thaliana]
          Length = 389

 Score =  529 bits (1362), Expect(2) = e-174
 Identities = 253/273 (92%), Positives = 264/273 (96%)
 Frame = +3

Query: 249  FIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPADHPLRQDPEFYVLKEDSSPCIFG 428
            FIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLP DHPLRQDPEFYVLKED SPCIFG
Sbjct: 117  FIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDHPLRQDPEFYVLKEDISPCIFG 176

Query: 429  SIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGVDGPSEGVPRV 608
            SIEKQRWSYACAKQLIERL+YAEGAENGLEFTIVRPFNWIGPRMDFIPG+DGPSEGVPRV
Sbjct: 177  SIEKQRWSYACAKQLIERLVYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRV 236

Query: 609  LACFSNNLLRGEPLKLVDGGQSQRTFVYIKDAIEAVMLMIENPARANGHIFNVGNPNNEV 788
            LACFSNNLLR EPLKLVDGG+SQRTF+YIKDAIEAV+LMIENP RANGHIFNVGNPNNEV
Sbjct: 237  LACFSNNLLRREPLKLVDGGESQRTFIYIKDAIEAVLLMIENPERANGHIFNVGNPNNEV 296

Query: 789  TVKQLAEMMTEVFSKVSGEPAIEVPTIDVSSKEFYGEGYDDSDKRIPDMTIINRQLGWNP 968
            TV+QLAEMMTEV++KVSGE AIE PTIDVSSKEFYGEGYDDSDKRIPDMTIINRQLGWNP
Sbjct: 297  TVRQLAEMMTEVYAKVSGETAIESPTIDVSSKEFYGEGYDDSDKRIPDMTIINRQLGWNP 356

Query: 969  KTSLWDLLESTLTYQHRTYAEAVKKAIAKPAAT 1067
            KTSLWDLLESTLTYQH TYAEA+KKA +KP A+
Sbjct: 357  KTSLWDLLESTLTYQHTTYAEAIKKATSKPVAS 389



 Score =  112 bits (280), Expect(2) = e-174
 Identities = 54/55 (98%), Positives = 54/55 (98%)
 Frame = +2

Query: 14  RIHFHRINIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPV 178
           RI FHRINIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPV
Sbjct: 69  RIQFHRINIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPV 123


>ref|XP_002892446.1| UDP-D-apiose/UDP-D-xylose synthase 2 [Arabidopsis lyrata subsp.
            lyrata] gi|297338288|gb|EFH68705.1|
            UDP-D-apiose/UDP-D-xylose synthase 2 [Arabidopsis lyrata
            subsp. lyrata]
          Length = 389

 Score =  529 bits (1362), Expect(2) = e-174
 Identities = 253/273 (92%), Positives = 264/273 (96%)
 Frame = +3

Query: 249  FIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPADHPLRQDPEFYVLKEDSSPCIFG 428
            FIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLP DHPLRQDPEFYVLKED SPCIFG
Sbjct: 117  FIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDHPLRQDPEFYVLKEDISPCIFG 176

Query: 429  SIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGVDGPSEGVPRV 608
            SIEKQRWSYACAKQLIERL+YAEGAENGLEFTIVRPFNWIGPRMDFIPG+DGPSEGVPRV
Sbjct: 177  SIEKQRWSYACAKQLIERLVYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRV 236

Query: 609  LACFSNNLLRGEPLKLVDGGQSQRTFVYIKDAIEAVMLMIENPARANGHIFNVGNPNNEV 788
            LACFSNNLLR EPLKLVDGG+SQRTF+YIKDAIEAV+LMIENP RANGHIFNVGNPNNEV
Sbjct: 237  LACFSNNLLRREPLKLVDGGESQRTFIYIKDAIEAVLLMIENPERANGHIFNVGNPNNEV 296

Query: 789  TVKQLAEMMTEVFSKVSGEPAIEVPTIDVSSKEFYGEGYDDSDKRIPDMTIINRQLGWNP 968
            TV+QLAEMMTEV++KVSGE AIE PTIDVSSKEFYGEGYDDSDKRIPDMTIINRQLGWNP
Sbjct: 297  TVRQLAEMMTEVYAKVSGETAIESPTIDVSSKEFYGEGYDDSDKRIPDMTIINRQLGWNP 356

Query: 969  KTSLWDLLESTLTYQHRTYAEAVKKAIAKPAAT 1067
            KTSLWDLLESTLTYQH TYAEA+KKA +KP A+
Sbjct: 357  KTSLWDLLESTLTYQHTTYAEAIKKATSKPVAS 389



 Score =  112 bits (280), Expect(2) = e-174
 Identities = 54/55 (98%), Positives = 54/55 (98%)
 Frame = +2

Query: 14  RIHFHRINIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPV 178
           RI FHRINIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPV
Sbjct: 69  RIQFHRINIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPV 123


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