BLASTX nr result
ID: Coptis21_contig00000387
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00000387
(1788 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002264817.2| PREDICTED: uncharacterized protein LOC100267... 262 2e-67
ref|XP_004152189.1| PREDICTED: uncharacterized protein LOC101212... 247 8e-63
ref|XP_004167412.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 242 2e-61
ref|XP_002303830.1| predicted protein [Populus trichocarpa] gi|2... 229 1e-57
ref|NP_849914.1| S15/NS1, RNA-binding protein [Arabidopsis thali... 211 4e-52
>ref|XP_002264817.2| PREDICTED: uncharacterized protein LOC100267570 [Vitis vinifera]
Length = 443
Score = 262 bits (669), Expect = 2e-67
Identities = 158/367 (43%), Positives = 210/367 (57%), Gaps = 22/367 (5%)
Frame = +1
Query: 262 SSLQNRQPPISTETSSFDRIRQNLSQFQSKTAPP----------SNTVSFHELYKKNVSE 411
SS + PP+S++ +S + IR+NLS+F+S+++ P S+ +SF ELYK+NV
Sbjct: 82 SSSPSSSPPLSSKIASLEEIRKNLSEFRSRSSVPNPSPSQQSSSSSPISFQELYKRNVIP 141
Query: 412 KGGEEMV-KTSFASIRANLKLVKPGNQNLNSRERDSGKIXXXXXXXXXXXXXXXXXXXXX 588
K + K SF +IR +LK ++P + + + +
Sbjct: 142 KPEDSPKGKLSFDAIRESLKQLRPSSSAEGGQTKGKTDVLSLSAFQDSLRLRPVDSGATK 201
Query: 589 XXXVP-------PSSMFRKE----KESVSEATKTRSMEYVRSYNYNELGEKLKQLRPTDV 735
V P S+F K+ KE+ S A KT +V+ Y ELG+KL++LRP +
Sbjct: 202 SSVVIGGSDDALPMSVFGKDIRDRKEAESTAMKT---SFVKWYGPEELGKKLRELRP-ET 257
Query: 736 KGKNCFSFXXXXXXXXXXXXXXAKELDSRIGGVVTKDLKECIQTLRQVTEEKNKKAMVQR 915
++CFS KE +S I GV KDL+E + LR +EK KK+ +
Sbjct: 258 GAESCFSLKELNERLMKLREMEEKETESSIPGVSFKDLRESLVRLRMADDEKTKKSSSE- 316
Query: 916 LEIVGNIGGTPKYMLQPPQEQLVEKYFHPDNMSSXXXXXXXXXXVRDEFKMSESDCGSSR 1095
L+I+G +GGTP +ML PP+E LVE+YFHPDNMSS VRDEFKMSESDCGS+R
Sbjct: 317 LDILGRLGGTPSFMLAPPKEHLVEQYFHPDNMSSAEKLKVELKKVRDEFKMSESDCGSAR 376
Query: 1096 VQVAQLTTKIKHLSSVLHKKDKHSRKGLQEMVQXXXXXXXXXXXTDWESFCFCLDKLGLR 1275
VQVAQLTTKIKHL+S LHKKDKHSRKGLQ MVQ TDW+S+C L KLGLR
Sbjct: 377 VQVAQLTTKIKHLNSALHKKDKHSRKGLQAMVQRRKKLLKYLRRTDWDSYCLVLSKLGLR 436
Query: 1276 DNPDYKN 1296
DNP+YKN
Sbjct: 437 DNPNYKN 443
>ref|XP_004152189.1| PREDICTED: uncharacterized protein LOC101212028 [Cucumis sativus]
Length = 449
Score = 247 bits (630), Expect = 8e-63
Identities = 147/366 (40%), Positives = 199/366 (54%), Gaps = 26/366 (7%)
Frame = +1
Query: 274 NRQPPISTETSSFDRIRQNLSQFQSKTA--PPSNT-------------VSFHELYKKNVS 408
NR +++ +S + IR+NLS+F+++++ PPS+ +SF +LYK N
Sbjct: 85 NRSTSPASKAASLEEIRKNLSEFRNRSSVPPPSDLGSTPSSSSSWQRGISFQDLYKNNSM 144
Query: 409 EKG-----------GEEMVKTSFASIRANLKLVKPGNQNLNSRERDSGKIXXXXXXXXXX 555
KG G + F SI+ +L+ V + + S E SG
Sbjct: 145 RKGEDSNDAPANSTGGGRIGMPFDSIKESLRKVSSA-RGMQS-ELKSGDSLSLSAFKDSL 202
Query: 556 XXXXXXXXXXXXXXVPPSSMFRKEKESVSEATKTRSMEYVRSYNYNELGEKLKQLRPTDV 735
+P S ++ KE E+V+ Y+Y+ELG KL+ LRP
Sbjct: 203 KLKPSDPVMGGTERLPVSVFGKEMKEKKDGKNVGLKTEFVKMYSYDELGNKLRNLRPDKE 262
Query: 736 KGKNCFSFXXXXXXXXXXXXXXAKELDSRIGGVVTKDLKECIQTLRQVTEEKNKKAMVQR 915
KGKN FS KE +SRIGG+ +DL+ + ++ +E+ KKA +QR
Sbjct: 263 KGKNWFSLTELNDRLVKLRTMEEKETESRIGGISFQDLRASLMQMKISDDEREKKATLQR 322
Query: 916 LEIVGNIGGTPKYMLQPPQEQLVEKYFHPDNMSSXXXXXXXXXXVRDEFKMSESDCGSSR 1095
L+I+G + TP YML+PP E LVEKYFHPDNMSS VR++FKMSESDCGS+R
Sbjct: 323 LDIMGQLVRTPNYMLEPPNEHLVEKYFHPDNMSSAEKMKIELAKVREKFKMSESDCGSAR 382
Query: 1096 VQVAQLTTKIKHLSSVLHKKDKHSRKGLQEMVQXXXXXXXXXXXTDWESFCFCLDKLGLR 1275
VQVAQLTTKI HL++VLHKKDKHS+KGL MVQ TDW+S+C L+ LGLR
Sbjct: 383 VQVAQLTTKINHLTAVLHKKDKHSKKGLLGMVQQRKKLLKYLRRTDWDSYCMILNTLGLR 442
Query: 1276 DNPDYK 1293
DNPDYK
Sbjct: 443 DNPDYK 448
>ref|XP_004167412.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101229401
[Cucumis sativus]
Length = 449
Score = 242 bits (618), Expect = 2e-61
Identities = 149/377 (39%), Positives = 202/377 (53%), Gaps = 37/377 (9%)
Frame = +1
Query: 274 NRQPPISTETSSFDRIRQNLSQFQSKTA--PPSNT-------------VSFHELYKKNVS 408
NR +++ +S + IR+NLS+F+++++ PPS+ +SF +LYK N
Sbjct: 85 NRSTSPASKAASLEEIRKNLSEFRNRSSVPPPSDLGSTPSSSSSWQRGISFQDLYKNNSM 144
Query: 409 EKG-----------GEEMVKTSFASIRANLKLV----------KPGNQNLNSRERDSGKI 525
KG G + F SI+ +L+ V K G+ S +DS K+
Sbjct: 145 RKGEDSNDAPANSTGGGRIGMPFDSIKESLRKVSSARGMQSELKSGDSLSLSAFKDSLKL 204
Query: 526 XXXXXXXXXXXXXXXXXXXXXXXXVPPSSMFRKEKESVSEATKTRSMEYVRSYNYNELGE 705
P S+F KE + E+V+ Y+Y+ELG
Sbjct: 205 KPSDPVMGGTERL-------------PVSVFGKEMKEKDGKNVGLKTEFVKMYSYDELGN 251
Query: 706 KLKQLRPTDVKGKNCFSFXXXXXXXXXXXXXXAKELDSRIGGVVTKDLKECIQTLRQVTE 885
KL+ LRP KGKN FS KE +SRIGG+ +DL+ + ++ +
Sbjct: 252 KLRNLRPDKEKGKNWFSLTELNDRLVKLRTMEEKETESRIGGISFQDLRASLMQMKISDD 311
Query: 886 EKNKKA-MVQRLEIVGNIGGTPKYMLQPPQEQLVEKYFHPDNMSSXXXXXXXXXXVRDEF 1062
E+ KK ++QRL+I+G + TP YML+PP E LVEKYFHPDNMSS VR++F
Sbjct: 312 EREKKRHVIQRLDIMGQLVRTPNYMLEPPNEHLVEKYFHPDNMSSAEKMKIELAKVREKF 371
Query: 1063 KMSESDCGSSRVQVAQLTTKIKHLSSVLHKKDKHSRKGLQEMVQXXXXXXXXXXXTDWES 1242
KMSESDCGS+RVQVAQLTTKI HL++VLHKKDKHS+KGL MVQ TDW+S
Sbjct: 372 KMSESDCGSARVQVAQLTTKINHLTAVLHKKDKHSKKGLLGMVQQRKKLLKYLRRTDWDS 431
Query: 1243 FCFCLDKLGLRDNPDYK 1293
+C L+ LGLRDNPDYK
Sbjct: 432 YCMILNTLGLRDNPDYK 448
>ref|XP_002303830.1| predicted protein [Populus trichocarpa] gi|222841262|gb|EEE78809.1|
predicted protein [Populus trichocarpa]
Length = 470
Score = 229 bits (585), Expect = 1e-57
Identities = 146/370 (39%), Positives = 198/370 (53%), Gaps = 36/370 (9%)
Frame = +1
Query: 292 STETSSFDRIRQNLSQFQSKTAPP---------------SNTVSFHELYKKNVSEK--GG 420
++ +SFD IR+NLS+F+ +++ P +SF ELYK+NV + GG
Sbjct: 98 TSNIASFDEIRKNLSEFRLRSSDPPPREPNSAPSQEPSSKQQISFQELYKRNVLARSTGG 157
Query: 421 EEMVKT-------------SFASIRANLKLVKPGNQNLNSRERDSGKIXXXXXXXXXXXX 561
++ +F +IR +L+ +K G N N+ G++
Sbjct: 158 SGTTQSGGINANQPISGRLTFDAIRESLRQMKGGGDN-NNTAAGRGRVGELSFSSFKLKP 216
Query: 562 XXXXXXXXXXXXVP-----PSSMFRKEKESVSEATKTRSMEYVRSYNYNELGEKLKQLRP 726
+ PS++F +E E A S E+V+ Y++ ELG+KL+ LRP
Sbjct: 217 GNENEPMNKSTIIGGTEGLPSAVFGREMEGEGGAKGEMSTEFVKMYSHGELGDKLRILRP 276
Query: 727 TDVKG-KNCFSFXXXXXXXXXXXXXXAKELDSRIGGVVTKDLKECIQTLRQVTEEKNKKA 903
+G K F+ KE +SRI GV +DL+E + L+ ++EK K
Sbjct: 277 KVKRGEKGWFTLKELNERLRKLREMEEKETESRISGVSFRDLRESLVKLKASSDEKAIKN 336
Query: 904 MVQRLEIVGNIGGTPKYMLQPPQEQLVEKYFHPDNMSSXXXXXXXXXXVRDEFKMSESDC 1083
VQRL ++G + + LQPP++ LVEKYFHPDNMSS VRDEFKMSESDC
Sbjct: 337 SVQRLNLMGQLRAS-NVTLQPPKKHLVEKYFHPDNMSSSEKMKIELARVRDEFKMSESDC 395
Query: 1084 GSSRVQVAQLTTKIKHLSSVLHKKDKHSRKGLQEMVQXXXXXXXXXXXTDWESFCFCLDK 1263
GS+RVQVA LTTKIKHLSSVL+KKDKHSRKGL MVQ TDW+S+C L K
Sbjct: 396 GSARVQVALLTTKIKHLSSVLNKKDKHSRKGLIGMVQKRKKLLKYLRRTDWDSYCLVLSK 455
Query: 1264 LGLRDNPDYK 1293
LGLRDNPD+K
Sbjct: 456 LGLRDNPDHK 465
>ref|NP_849914.1| S15/NS1, RNA-binding protein [Arabidopsis thaliana]
gi|6730725|gb|AAF27115.1|AC018849_3 unknown protein;
13226-11448 [Arabidopsis thaliana]
gi|332198307|gb|AEE36428.1| S15/NS1, RNA-binding protein
[Arabidopsis thaliana]
Length = 414
Score = 211 bits (538), Expect = 4e-52
Identities = 132/328 (40%), Positives = 174/328 (53%), Gaps = 3/328 (0%)
Frame = +1
Query: 319 IRQNLSQFQSK-TAPPSNTVSFHELYKKNV-SEKGGEEMVK-TSFASIRANLKLVKPGNQ 489
IR+NL++F+S+ TAPP + +L+K+NV S+ GG ++ +I+ANL+ ++P
Sbjct: 92 IRRNLNEFRSRATAPPPRDMQ--DLFKQNVLSKSGGTRRIEGVPLTNIKANLRQMRPQQA 149
Query: 490 NLNSRERDSGKIXXXXXXXXXXXXXXXXXXXXXXXXVPPSSMFRKEKESVSEATKTRSME 669
S+ + I P S+ KE E + E
Sbjct: 150 TTESKWANLSGIQNIMKTNINDNIRSNVIGGAAEGL--PHSVVGKELEEEDVTEEEMKSE 207
Query: 670 YVRSYNYNELGEKLKQLRPTDVKGKNCFSFXXXXXXXXXXXXXXAKELDSRIGGVVTKDL 849
+++SY+ ELGEKL+ RP K + FS ++ +V
Sbjct: 208 FIKSYDPIELGEKLRLYRPEGKKEEGWFSLQELNQRLVKLRAMEEEQFQKT--SIVHPSF 265
Query: 850 KECIQTLRQVTEEKNKKAMVQRLEIVGNIGGTPKYMLQPPQEQLVEKYFHPDNMSSXXXX 1029
+++ + K Q I G + GTPKYML+PP++QLVE YFHPDNMSS
Sbjct: 266 VNNLRSEFHKFTKAQKSDPFQNTNIWGVLSGTPKYMLEPPKDQLVETYFHPDNMSSAEKM 325
Query: 1030 XXXXXXVRDEFKMSESDCGSSRVQVAQLTTKIKHLSSVLHKKDKHSRKGLQEMVQXXXXX 1209
VR+EFKMSESDCGS+RVQVAQLTTKIKHLSSVLHKKDKHSRKGL MVQ
Sbjct: 326 KIELAKVREEFKMSESDCGSARVQVAQLTTKIKHLSSVLHKKDKHSRKGLIAMVQRRKKL 385
Query: 1210 XXXXXXTDWESFCFCLDKLGLRDNPDYK 1293
TDW+S+C L KLGLRDNPDYK
Sbjct: 386 LKYMRRTDWDSYCLSLSKLGLRDNPDYK 413