BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000383
         (1296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003604568.1| 40S ribosomal protein S4 [Medicago truncatul...   274   e-118
ref|XP_003544057.1| PREDICTED: 40S ribosomal protein S4-1-like [...   274   e-118
gb|ACU24295.1| unknown [Glycine max]                                  274   e-118
ref|XP_003547932.1| PREDICTED: 40S ribosomal protein S4-1-like [...   274   e-117
ref|NP_001235826.1| 40S ribosomal S4 protein [Glycine max] gi|22...   274   e-117

>ref|XP_003604568.1| 40S ribosomal protein S4 [Medicago truncatula]
           gi|355505623|gb|AES86765.1| 40S ribosomal protein S4
           [Medicago truncatula]
          Length = 264

 Score =  274 bits (700), Expect(2) = e-118
 Identities = 130/137 (94%), Positives = 135/137 (98%)
 Frame = +1

Query: 1   LKRLNAPHHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVVAILMQR 180
           LKRLNAP HWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV+AILMQR
Sbjct: 9   LKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQR 68

Query: 181 HILVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRS 360
           H+LVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++D+EAKFKLCKVRS
Sbjct: 69  HVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDDEAKFKLCKVRS 128

Query: 361 VQLGQKGIPYLNTYDGR 411
           VQ GQKGIPYLNTYDGR
Sbjct: 129 VQFGQKGIPYLNTYDGR 145



 Score =  179 bits (455), Expect(2) = e-118
 Identities = 84/100 (84%), Positives = 95/100 (95%)
 Frame = +2

Query: 530 ESSKIVDFIKFDVGNVIMVTGGRNRGRVGLIKRREKHRGTFETVHVQDATGHEFATRLGN 709
           E++KI DFIKFDVGNV+MVTGGRNRGRVG+IK REKH+GTFET+HVQDA+GHEFATRLGN
Sbjct: 165 ENNKITDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGTFETIHVQDASGHEFATRLGN 224

Query: 710 VYTIGKGTKPWLSLPKGRGIKLTVIEEARKRQSAQAATPA 829
           V+TIGKGTKPW+SLPKG+GIKLTVIEEARKRQ+AQ  T A
Sbjct: 225 VFTIGKGTKPWVSLPKGKGIKLTVIEEARKRQAAQNVTAA 264


>ref|XP_003544057.1| PREDICTED: 40S ribosomal protein S4-1-like [Glycine max]
          Length = 264

 Score =  274 bits (701), Expect(2) = e-118
 Identities = 131/137 (95%), Positives = 135/137 (98%)
 Frame = +1

Query: 1   LKRLNAPHHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVVAILMQR 180
           LKRLNAP HWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV+AILMQR
Sbjct: 9   LKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQR 68

Query: 181 HILVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRS 360
           H+LVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSI+D+EAKFKLCKVRS
Sbjct: 69  HVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDDEAKFKLCKVRS 128

Query: 361 VQLGQKGIPYLNTYDGR 411
           VQ GQKGIPYLNTYDGR
Sbjct: 129 VQFGQKGIPYLNTYDGR 145



 Score =  177 bits (449), Expect(2) = e-118
 Identities = 82/100 (82%), Positives = 95/100 (95%)
 Frame = +2

Query: 530 ESSKIVDFIKFDVGNVIMVTGGRNRGRVGLIKRREKHRGTFETVHVQDATGHEFATRLGN 709
           E +KIVDFIKFDVGNV+MVTGGRNRGRVG+IK REKH+G+FET+HVQDATGHEFATR+GN
Sbjct: 165 EENKIVDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRMGN 224

Query: 710 VYTIGKGTKPWLSLPKGRGIKLTVIEEARKRQSAQAATPA 829
           V+TIGKGTKPW+SLPKG+GIKL++IEEARKR +AQ AT A
Sbjct: 225 VFTIGKGTKPWISLPKGKGIKLSIIEEARKRIAAQQATTA 264


>gb|ACU24295.1| unknown [Glycine max]
          Length = 264

 Score =  274 bits (701), Expect(2) = e-118
 Identities = 131/137 (95%), Positives = 135/137 (98%)
 Frame = +1

Query: 1   LKRLNAPHHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVVAILMQR 180
           LKRLNAP HWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV+AILMQR
Sbjct: 9   LKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQR 68

Query: 181 HILVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRS 360
           H+LVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSI+D+EAKFKLCKVRS
Sbjct: 69  HVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDDEAKFKLCKVRS 128

Query: 361 VQLGQKGIPYLNTYDGR 411
           VQ GQKGIPYLNTYDGR
Sbjct: 129 VQFGQKGIPYLNTYDGR 145



 Score =  177 bits (449), Expect(2) = e-118
 Identities = 82/100 (82%), Positives = 95/100 (95%)
 Frame = +2

Query: 530 ESSKIVDFIKFDVGNVIMVTGGRNRGRVGLIKRREKHRGTFETVHVQDATGHEFATRLGN 709
           E +KIVDFIKFDVGNV+MVTGGRNRGRVG+IK REKH+G+FET+HVQDATGHEFATR+GN
Sbjct: 165 EENKIVDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRMGN 224

Query: 710 VYTIGKGTKPWLSLPKGRGIKLTVIEEARKRQSAQAATPA 829
           V+TIGKGTKPW+SLPKG+GIKL++IEEARKR +AQ AT A
Sbjct: 225 VFTIGKGTKPWISLPKGKGIKLSIIEEARKRIAAQQATTA 264


>ref|XP_003547932.1| PREDICTED: 40S ribosomal protein S4-1-like [Glycine max]
          Length = 264

 Score =  274 bits (700), Expect(2) = e-117
 Identities = 130/137 (94%), Positives = 135/137 (98%)
 Frame = +1

Query: 1   LKRLNAPHHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVVAILMQR 180
           LKRLNAP HWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV+AILMQR
Sbjct: 9   LKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQR 68

Query: 181 HILVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRS 360
           H+LVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++D+EAKFKLCKVRS
Sbjct: 69  HVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDDEAKFKLCKVRS 128

Query: 361 VQLGQKGIPYLNTYDGR 411
           VQ GQKGIPYLNTYDGR
Sbjct: 129 VQFGQKGIPYLNTYDGR 145



 Score =  177 bits (449), Expect(2) = e-117
 Identities = 82/100 (82%), Positives = 95/100 (95%)
 Frame = +2

Query: 530 ESSKIVDFIKFDVGNVIMVTGGRNRGRVGLIKRREKHRGTFETVHVQDATGHEFATRLGN 709
           E +KIVDFIKFDVGNV+MVTGGRNRGRVG+IK REKH+G+FET+HVQDATGHEFATR+GN
Sbjct: 165 EENKIVDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRMGN 224

Query: 710 VYTIGKGTKPWLSLPKGRGIKLTVIEEARKRQSAQAATPA 829
           V+TIGKGTKPW+SLPKG+GIKL++IEEARKR +AQ AT A
Sbjct: 225 VFTIGKGTKPWISLPKGKGIKLSIIEEARKRIAAQQATAA 264


>ref|NP_001235826.1| 40S ribosomal S4 protein [Glycine max] gi|22138108|gb|AAM93434.1|
           40S ribosomal S4 protein [Glycine max]
           gi|255641970|gb|ACU21252.1| unknown [Glycine max]
          Length = 264

 Score =  274 bits (700), Expect(2) = e-117
 Identities = 130/137 (94%), Positives = 135/137 (98%)
 Frame = +1

Query: 1   LKRLNAPHHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVVAILMQR 180
           LKRLNAP HWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV+AILMQR
Sbjct: 9   LKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQR 68

Query: 181 HILVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRS 360
           H+LVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++D+EAKFKLCKVRS
Sbjct: 69  HVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDDEAKFKLCKVRS 128

Query: 361 VQLGQKGIPYLNTYDGR 411
           VQ GQKGIPYLNTYDGR
Sbjct: 129 VQFGQKGIPYLNTYDGR 145



 Score =  176 bits (446), Expect(2) = e-117
 Identities = 81/100 (81%), Positives = 95/100 (95%)
 Frame = +2

Query: 530 ESSKIVDFIKFDVGNVIMVTGGRNRGRVGLIKRREKHRGTFETVHVQDATGHEFATRLGN 709
           E +KIVDFIKFDVGNV+MVTGGRNRGRVG+IK REKH+G+FET+HVQD+TGHEFATR+GN
Sbjct: 165 EENKIVDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHVQDSTGHEFATRMGN 224

Query: 710 VYTIGKGTKPWLSLPKGRGIKLTVIEEARKRQSAQAATPA 829
           V+TIGKGTKPW+SLPKG+GIKL++IEEARKR +AQ AT A
Sbjct: 225 VFTIGKGTKPWISLPKGKGIKLSIIEEARKRIAAQQATAA 264