BLASTX nr result

ID: Coptis21_contig00000374 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000374
         (719 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514173.1| 60S ribosomal protein L31, putative [Ricinus...   113   4e-23
ref|XP_002521524.1| 60S ribosomal protein L31, putative [Ricinus...   112   1e-22
ref|XP_004135690.1| PREDICTED: 60S ribosomal protein L31-like is...   111   1e-22
ref|XP_004141039.1| PREDICTED: 60S ribosomal protein L31-like is...   111   2e-22
ref|XP_002282984.1| PREDICTED: 60S ribosomal protein L31 [Vitis ...   111   2e-22

>ref|XP_002514173.1| 60S ribosomal protein L31, putative [Ricinus communis]
           gi|223546629|gb|EEF48127.1| 60S ribosomal protein L31,
           putative [Ricinus communis]
          Length = 120

 Score =  113 bits (282), Expect = 4e-23
 Identities = 61/91 (67%), Positives = 67/91 (73%), Gaps = 1/91 (1%)
 Frame = +2

Query: 275 FKKKAPKAIKEIR*FTQKAMGTKDVRVDVKLNKQIWXXXXXXXXXXXXXXXXXXXNDDE- 451
           FKKKAPKAIKEIR F QKAMGTKDVRVDVKLNKQIW                   NDDE 
Sbjct: 30  FKKKAPKAIKEIRKFAQKAMGTKDVRVDVKLNKQIWSRGIRSVPRRIRVRIARRRNDDED 89

Query: 452 AKEELHSLVTVAEIPSEGLRGLGSKVIEEGD 544
           AKEEL+SLVTVAEIP EGL+G+G+K+IE+ D
Sbjct: 90  AKEELYSLVTVAEIPPEGLKGMGTKIIEDED 120


>ref|XP_002521524.1| 60S ribosomal protein L31, putative [Ricinus communis]
           gi|223539202|gb|EEF40795.1| 60S ribosomal protein L31,
           putative [Ricinus communis]
          Length = 119

 Score =  112 bits (279), Expect = 1e-22
 Identities = 62/91 (68%), Positives = 66/91 (72%), Gaps = 1/91 (1%)
 Frame = +2

Query: 275 FKKKAPKAIKEIR*FTQKAMGTKDVRVDVKLNKQIWXXXXXXXXXXXXXXXXXXXNDDE- 451
           FKKKAPKAIKEIR F QKAMGT DVRVDVKLNKQIW                   NDDE 
Sbjct: 29  FKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKQIWSRGIRSVPRRIRVRIARKRNDDED 88

Query: 452 AKEELHSLVTVAEIPSEGLRGLGSKVIEEGD 544
           AKEEL+SLVTVAEIPSEGL GLG+K+IE+ D
Sbjct: 89  AKEELYSLVTVAEIPSEGLGGLGTKIIEDED 119


>ref|XP_004135690.1| PREDICTED: 60S ribosomal protein L31-like isoform 1 [Cucumis
           sativus] gi|449435818|ref|XP_004135691.1| PREDICTED: 60S
           ribosomal protein L31-like isoform 2 [Cucumis sativus]
           gi|449489849|ref|XP_004158436.1| PREDICTED: 60S
           ribosomal protein L31-like isoform 1 [Cucumis sativus]
           gi|449489851|ref|XP_004158437.1| PREDICTED: 60S
           ribosomal protein L31-like isoform 2 [Cucumis sativus]
          Length = 121

 Score =  111 bits (278), Expect = 1e-22
 Identities = 60/92 (65%), Positives = 68/92 (73%), Gaps = 1/92 (1%)
 Frame = +2

Query: 275 FKKKAPKAIKEIR*FTQKAMGTKDVRVDVKLNKQIWXXXXXXXXXXXXXXXXXXXNDDE- 451
           FKKKAPKAIKEIR F +KAMGTKDVRVDVKLNK IW                   NDDE 
Sbjct: 30  FKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDED 89

Query: 452 AKEELHSLVTVAEIPSEGLRGLGSKVIEEGDD 547
           AKEEL+SLVTVAEIP+EGL+GLG+KVI++ +D
Sbjct: 90  AKEELYSLVTVAEIPAEGLKGLGTKVIDDEED 121


>ref|XP_004141039.1| PREDICTED: 60S ribosomal protein L31-like isoform 1 [Cucumis
           sativus] gi|449446562|ref|XP_004141040.1| PREDICTED: 60S
           ribosomal protein L31-like isoform 2 [Cucumis sativus]
           gi|449488001|ref|XP_004157907.1| PREDICTED: 60S
           ribosomal protein L31-like isoform 1 [Cucumis sativus]
           gi|449488003|ref|XP_004157908.1| PREDICTED: 60S
           ribosomal protein L31-like isoform 2 [Cucumis sativus]
          Length = 120

 Score =  111 bits (277), Expect = 2e-22
 Identities = 61/91 (67%), Positives = 66/91 (72%), Gaps = 1/91 (1%)
 Frame = +2

Query: 275 FKKKAPKAIKEIR*FTQKAMGTKDVRVDVKLNKQIWXXXXXXXXXXXXXXXXXXXNDDE- 451
           FKKKAPKAIKEIR F + AMGTKDVRVDVKLNK IW                   NDDE 
Sbjct: 30  FKKKAPKAIKEIRKFAENAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDED 89

Query: 452 AKEELHSLVTVAEIPSEGLRGLGSKVIEEGD 544
           AKEEL+SLVTVAEIP+EGL+GLG+KVIEE D
Sbjct: 90  AKEELYSLVTVAEIPAEGLKGLGTKVIEEED 120


>ref|XP_002282984.1| PREDICTED: 60S ribosomal protein L31 [Vitis vinifera]
          Length = 120

 Score =  111 bits (277), Expect = 2e-22
 Identities = 61/91 (67%), Positives = 66/91 (72%), Gaps = 1/91 (1%)
 Frame = +2

Query: 275 FKKKAPKAIKEIR*FTQKAMGTKDVRVDVKLNKQIWXXXXXXXXXXXXXXXXXXXNDDE- 451
           FKKKAPKAIKEIR F QKAMGTKDVRVDVKLNK IW                   NDDE 
Sbjct: 30  FKKKAPKAIKEIRKFAQKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDED 89

Query: 452 AKEELHSLVTVAEIPSEGLRGLGSKVIEEGD 544
           AKEEL+SLVTVAEIP+EGL+GL +K+IEE D
Sbjct: 90  AKEELYSLVTVAEIPAEGLKGLETKIIEEDD 120


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