BLASTX nr result

ID: Coptis21_contig00000373 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000373
         (652 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135690.1| PREDICTED: 60S ribosomal protein L31-like is...   148   4e-37
ref|XP_002282984.1| PREDICTED: 60S ribosomal protein L31 [Vitis ...   149   5e-37
emb|CAN62000.1| hypothetical protein VITISV_007877 [Vitis vinifera]   149   5e-37
ref|XP_004141039.1| PREDICTED: 60S ribosomal protein L31-like is...   146   5e-37
gb|ACJ02351.1| 60S ribosomal protein L31 [Vernicia fordii]            147   1e-36

>ref|XP_004135690.1| PREDICTED: 60S ribosomal protein L31-like isoform 1 [Cucumis
           sativus] gi|449435818|ref|XP_004135691.1| PREDICTED: 60S
           ribosomal protein L31-like isoform 2 [Cucumis sativus]
           gi|449489849|ref|XP_004158436.1| PREDICTED: 60S
           ribosomal protein L31-like isoform 1 [Cucumis sativus]
           gi|449489851|ref|XP_004158437.1| PREDICTED: 60S
           ribosomal protein L31-like isoform 2 [Cucumis sativus]
          Length = 121

 Score =  148 bits (373), Expect(2) = 4e-37
 Identities = 74/92 (80%), Positives = 76/92 (82%)
 Frame = +2

Query: 110 YTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTKDVRVDVKLNKHIWSSGIXXXXXXX 289
           YTINLHKRLHGCTFKKKAPKAIKEIRKFA+KAMGTKDVRVDVKLNKHIWS GI       
Sbjct: 17  YTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRI 76

Query: 290 XXXXXXXXNDDEDAKEELYSLVTVAEIPSEGL 385
                   NDDEDAKEELYSLVTVAEIP+EGL
Sbjct: 77  RVRIARKRNDDEDAKEELYSLVTVAEIPAEGL 108



 Score = 32.7 bits (73), Expect(2) = 4e-37
 Identities = 13/19 (68%), Positives = 18/19 (94%)
 Frame = +1

Query: 448 IPSEGLRGLGTKVIEEGDD 504
           IP+EGL+GLGTKVI++ +D
Sbjct: 103 IPAEGLKGLGTKVIDDEED 121


>ref|XP_002282984.1| PREDICTED: 60S ribosomal protein L31 [Vitis vinifera]
          Length = 120

 Score =  149 bits (376), Expect(2) = 5e-37
 Identities = 75/92 (81%), Positives = 76/92 (82%)
 Frame = +2

Query: 110 YTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTKDVRVDVKLNKHIWSSGIXXXXXXX 289
           YTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTKDVRVDVKLNKHIWS GI       
Sbjct: 17  YTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTKDVRVDVKLNKHIWSRGIRSVPRRI 76

Query: 290 XXXXXXXXNDDEDAKEELYSLVTVAEIPSEGL 385
                   NDDEDAKEELYSLVTVAEIP+EGL
Sbjct: 77  RVRIARKRNDDEDAKEELYSLVTVAEIPAEGL 108



 Score = 31.2 bits (69), Expect(2) = 5e-37
 Identities = 13/18 (72%), Positives = 16/18 (88%)
 Frame = +1

Query: 448 IPSEGLRGLGTKVIEEGD 501
           IP+EGL+GL TK+IEE D
Sbjct: 103 IPAEGLKGLETKIIEEDD 120


>emb|CAN62000.1| hypothetical protein VITISV_007877 [Vitis vinifera]
          Length = 120

 Score =  149 bits (376), Expect(2) = 5e-37
 Identities = 75/92 (81%), Positives = 76/92 (82%)
 Frame = +2

Query: 110 YTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTKDVRVDVKLNKHIWSSGIXXXXXXX 289
           YTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTKDVRVDVKLNKHIWS GI       
Sbjct: 17  YTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTKDVRVDVKLNKHIWSRGIRSVPRRI 76

Query: 290 XXXXXXXXNDDEDAKEELYSLVTVAEIPSEGL 385
                   NDDEDAKEELYSLVTVAEIP+EGL
Sbjct: 77  RVRIARKRNDDEDAKEELYSLVTVAEIPAEGL 108



 Score = 31.2 bits (69), Expect(2) = 5e-37
 Identities = 13/18 (72%), Positives = 16/18 (88%)
 Frame = +1

Query: 448 IPSEGLRGLGTKVIEEGD 501
           IP+EGL+GL TK+IEE D
Sbjct: 103 IPAEGLKGLETKIIEEDD 120


>ref|XP_004141039.1| PREDICTED: 60S ribosomal protein L31-like isoform 1 [Cucumis
           sativus] gi|449446562|ref|XP_004141040.1| PREDICTED: 60S
           ribosomal protein L31-like isoform 2 [Cucumis sativus]
           gi|449488001|ref|XP_004157907.1| PREDICTED: 60S
           ribosomal protein L31-like isoform 1 [Cucumis sativus]
           gi|449488003|ref|XP_004157908.1| PREDICTED: 60S
           ribosomal protein L31-like isoform 2 [Cucumis sativus]
          Length = 120

 Score =  146 bits (368), Expect(2) = 5e-37
 Identities = 73/92 (79%), Positives = 75/92 (81%)
 Frame = +2

Query: 110 YTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTKDVRVDVKLNKHIWSSGIXXXXXXX 289
           YTINLHKRLHGCTFKKKAPKAIKEIRKFA+ AMGTKDVRVDVKLNKHIWS GI       
Sbjct: 17  YTINLHKRLHGCTFKKKAPKAIKEIRKFAENAMGTKDVRVDVKLNKHIWSRGIRSVPRRI 76

Query: 290 XXXXXXXXNDDEDAKEELYSLVTVAEIPSEGL 385
                   NDDEDAKEELYSLVTVAEIP+EGL
Sbjct: 77  RVRIARKRNDDEDAKEELYSLVTVAEIPAEGL 108



 Score = 34.3 bits (77), Expect(2) = 5e-37
 Identities = 15/18 (83%), Positives = 17/18 (94%)
 Frame = +1

Query: 448 IPSEGLRGLGTKVIEEGD 501
           IP+EGL+GLGTKVIEE D
Sbjct: 103 IPAEGLKGLGTKVIEEED 120


>gb|ACJ02351.1| 60S ribosomal protein L31 [Vernicia fordii]
          Length = 120

 Score =  147 bits (371), Expect(2) = 1e-36
 Identities = 74/92 (80%), Positives = 75/92 (81%)
 Frame = +2

Query: 110 YTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTKDVRVDVKLNKHIWSSGIXXXXXXX 289
           YTINLHKRLHGCTFKKKAPKAIKEIRKFA KAMGTKDVRVDVKLNKHIWS GI       
Sbjct: 17  YTINLHKRLHGCTFKKKAPKAIKEIRKFAHKAMGTKDVRVDVKLNKHIWSRGIRSVPRRI 76

Query: 290 XXXXXXXXNDDEDAKEELYSLVTVAEIPSEGL 385
                   NDDEDAKEELYSLVTVAEIP+EGL
Sbjct: 77  RVRIARRRNDDEDAKEELYSLVTVAEIPAEGL 108



 Score = 32.0 bits (71), Expect(2) = 1e-36
 Identities = 13/18 (72%), Positives = 17/18 (94%)
 Frame = +1

Query: 448 IPSEGLRGLGTKVIEEGD 501
           IP+EGL+G+GTKVIE+ D
Sbjct: 103 IPAEGLKGVGTKVIEDED 120


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