BLASTX nr result

ID: Coptis21_contig00000365 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000365
         (2872 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25055.3| unnamed protein product [Vitis vinifera]              246   2e-62
ref|XP_002280876.1| PREDICTED: uncharacterized protein LOC100251...   246   2e-62
ref|XP_002306802.1| predicted protein [Populus trichocarpa] gi|2...   233   3e-58
ref|XP_002520955.1| cyclophilin, putative [Ricinus communis] gi|...   232   4e-58
emb|CAN75764.1| hypothetical protein VITISV_034442 [Vitis vinifera]   232   5e-58

>emb|CBI25055.3| unnamed protein product [Vitis vinifera]
          Length = 700

 Score =  246 bits (629), Expect = 2e-62
 Identities = 132/210 (62%), Positives = 147/210 (70%)
 Frame = +1

Query: 406  MAKSKNPLVFLDVVIDGGRPEKIVIELFSDVVPKTAENFRALCTGEKGTGPCTKKQLHFK 585
            M K KNPLVFLDV IDG   EKIVIELF+DVVPKTAENFRALCTGEKG G  T K LH+K
Sbjct: 1    MTKKKNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGVGTSTGKPLHYK 60

Query: 586  GSLFHRIIKGFMVQGGDFSKRDGTGGESIWGGRFADENFKLSHNEAGLLSMANAGKHTNG 765
            GS FHRIIKGFM QGGDFSK +GTGGESI+GG+FADENFK +H   G LSMAN+G +TNG
Sbjct: 61   GSFFHRIIKGFMAQGGDFSKGNGTGGESIYGGKFADENFKRAHEGPGFLSMANSGPNTNG 120

Query: 766  SQFFITLKATPHLDXXXXXXXXXXXXMDTVFRIEKQAGSEDGKPCCLVKIVDCGEGSEKK 945
            SQFF+T K  PHLD            +DT+ +IE Q G+ DGKP  LVKIVDCGE SE K
Sbjct: 121  SQFFMTFKRQPHLDGKHVVFGKVVQGIDTLKKIE-QLGTGDGKPARLVKIVDCGETSENK 179

Query: 946  INXXXXXXXXXXXXXXXXXXSFSDDSSDEK 1035
            I+                    SDDSSDE+
Sbjct: 180  IHGAVGTEKGRKKKSGKALS--SDDSSDEQ 207



 Score = 98.2 bits (243), Expect = 1e-17
 Identities = 100/398 (25%), Positives = 131/398 (32%), Gaps = 6/398 (1%)
 Frame = +1

Query: 1348 TDSGISESDDDVAHPQESAPAAFINSLHDEIKSSEDPAVDKHPPQPISRKADIDR----- 1512
            T S  S SDD+ A    SA     NS H E          KHP     +   +++     
Sbjct: 320  TSSSRSSSDDEKASHHVSAHKTS-NSTHTE---------SKHPRNLGKKTGALEQDTITK 369

Query: 1513 -QKKDGLKLAKDDSSHEEGEFAQEKGDHLNNGHDTEMKLDKIENKYPDSDNEXXXXXXXX 1689
             QK   LK+++DDSSHEEGEF+Q K + LNNGH TE K +K   ++P SD+         
Sbjct: 370  PQKDHELKMSEDDSSHEEGEFSQ-KNELLNNGHGTEAKSEKTAKQHPLSDDSGKSRSLTP 428

Query: 1690 XXXXXYQXXXXXXXXXXXXXXXXXXXXXXXXXXXAGRYSRQTNXXXXXXXXXXXXXXXXX 1869
                  +                             R S + N                 
Sbjct: 429  SPRRRAKISPRRNPSISPKKISTMSPRYQHDSRSPARKSGKRNQGNSRSPLGSPARKATE 488

Query: 1870 XXVAXXXXXXXXXXXPNGNPKRIRRGRGFTERYASARKXXXXXXXXXXXXXXXXXXXNIQ 2049
               +           PNG PKRIR+GRGFT+R++ AR+                   N+ 
Sbjct: 489  PPASNHGRGLSRSPSPNGAPKRIRKGRGFTDRFSFARRYRTPSPERSPRRSYPYGGRNVN 548

Query: 2050 EXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGRDRDQSR 2229
                                                               +GR+R +SR
Sbjct: 549  ARNRDRYSSYRSYSERSPQRRYRSPPRGRSPPRYRRRRSRSRSASRSPGAYHGRNRVRSR 608

Query: 2230 SPRHSRSPVDGRSSVSERLQSRLGPRGGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 2409
            SP  S SP D R  +SERL+SRLGP+G +                               
Sbjct: 609  SPMRSPSPTDNRPPISERLRSRLGPQGDD-------QRPSDKGRFRSRSRSRGSSGSGST 661

Query: 2410 XXXXXKPVEKAKLQXXXXXXXXXXVGNRGLVSYGDLSP 2523
                 KP  KA              G +GLVSYGD SP
Sbjct: 662  EATPQKPCGKAASVSPSRSRSSSPDGQKGLVSYGDASP 699


>ref|XP_002280876.1| PREDICTED: uncharacterized protein LOC100251093 [Vitis vinifera]
          Length = 702

 Score =  246 bits (629), Expect = 2e-62
 Identities = 132/210 (62%), Positives = 147/210 (70%)
 Frame = +1

Query: 406  MAKSKNPLVFLDVVIDGGRPEKIVIELFSDVVPKTAENFRALCTGEKGTGPCTKKQLHFK 585
            M K KNPLVFLDV IDG   EKIVIELF+DVVPKTAENFRALCTGEKG G  T K LH+K
Sbjct: 1    MTKKKNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGVGTSTGKPLHYK 60

Query: 586  GSLFHRIIKGFMVQGGDFSKRDGTGGESIWGGRFADENFKLSHNEAGLLSMANAGKHTNG 765
            GS FHRIIKGFM QGGDFSK +GTGGESI+GG+FADENFK +H   G LSMAN+G +TNG
Sbjct: 61   GSFFHRIIKGFMAQGGDFSKGNGTGGESIYGGKFADENFKRAHEGPGFLSMANSGPNTNG 120

Query: 766  SQFFITLKATPHLDXXXXXXXXXXXXMDTVFRIEKQAGSEDGKPCCLVKIVDCGEGSEKK 945
            SQFF+T K  PHLD            +DT+ +IE Q G+ DGKP  LVKIVDCGE SE K
Sbjct: 121  SQFFMTFKRQPHLDGKHVVFGKVVQGIDTLKKIE-QLGTGDGKPARLVKIVDCGETSENK 179

Query: 946  INXXXXXXXXXXXXXXXXXXSFSDDSSDEK 1035
            I+                    SDDSSDE+
Sbjct: 180  IHGAVGTEKGRKKKSGKALS--SDDSSDEQ 207



 Score = 98.6 bits (244), Expect = 8e-18
 Identities = 99/392 (25%), Positives = 129/392 (32%)
 Frame = +1

Query: 1348 TDSGISESDDDVAHPQESAPAAFINSLHDEIKSSEDPAVDKHPPQPISRKADIDRQKKDG 1527
            T S  S SDD+ A    SA     NS H E K   +    K     + +      QK   
Sbjct: 320  TSSSRSSSDDEKASHHVSAHKTS-NSTHTESKHPRNLDAGKKTGA-LEQDTITKPQKDHE 377

Query: 1528 LKLAKDDSSHEEGEFAQEKGDHLNNGHDTEMKLDKIENKYPDSDNEXXXXXXXXXXXXXY 1707
            LK+++DDSSHEEGEF+Q K + LNNGH TE K +K   ++P SD+               
Sbjct: 378  LKMSEDDSSHEEGEFSQ-KNELLNNGHGTEAKSEKTAKQHPLSDDSGKSRSLTPSPRRRA 436

Query: 1708 QXXXXXXXXXXXXXXXXXXXXXXXXXXXAGRYSRQTNXXXXXXXXXXXXXXXXXXXVAXX 1887
            +                             R S + N                    +  
Sbjct: 437  KISPRRNPSISPKKISTMSPRYQHDSRSPARKSGKRNQGNSRSPLGSPARKATEPPASNH 496

Query: 1888 XXXXXXXXXPNGNPKRIRRGRGFTERYASARKXXXXXXXXXXXXXXXXXXXNIQEXXXXX 2067
                     PNG PKRIR+GRGFT+R++ AR+                   N+       
Sbjct: 497  GRGLSRSPSPNGAPKRIRKGRGFTDRFSFARRYRTPSPERSPRRSYPYGGRNVNARNRDR 556

Query: 2068 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGRDRDQSRSPRHSR 2247
                                                         +GR+R +SRSP  S 
Sbjct: 557  YSSYRSYSERSPQRRYRSPPRGRSPPRYRRRRSRSRSASRSPGAYHGRNRVRSRSPMRSP 616

Query: 2248 SPVDGRSSVSERLQSRLGPRGGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK 2427
            SP D R  +SERL+SRLGP+G +                                    K
Sbjct: 617  SPTDNRPPISERLRSRLGPQGDD-------QRPSDKGRFRSRSRSRGSSGSGSTEATPQK 669

Query: 2428 PVEKAKLQXXXXXXXXXXVGNRGLVSYGDLSP 2523
            P  KA              G +GLVSYGD SP
Sbjct: 670  PCGKAASVSPSRSRSSSPDGQKGLVSYGDASP 701


>ref|XP_002306802.1| predicted protein [Populus trichocarpa] gi|222856251|gb|EEE93798.1|
           predicted protein [Populus trichocarpa]
          Length = 206

 Score =  233 bits (593), Expect = 3e-58
 Identities = 123/181 (67%), Positives = 135/181 (74%)
 Frame = +1

Query: 406 MAKSKNPLVFLDVVIDGGRPEKIVIELFSDVVPKTAENFRALCTGEKGTGPCTKKQLHFK 585
           M+K KNPLVFLDV IDG   E+I IELF+DVVP+TAENFRALCTGEKGTG  T K LH+K
Sbjct: 1   MSKKKNPLVFLDVSIDGDPAERIFIELFADVVPRTAENFRALCTGEKGTGKTTGKPLHYK 60

Query: 586 GSLFHRIIKGFMVQGGDFSKRDGTGGESIWGGRFADENFKLSHNEAGLLSMANAGKHTNG 765
           GS FHRIIK FM QGGDFSK +GTGGESI+GG+FADENF L H  AG LSMAN+G +TNG
Sbjct: 61  GSSFHRIIKEFMAQGGDFSKGNGTGGESIYGGKFADENFILRHEGAGHLSMANSGPNTNG 120

Query: 766 SQFFITLKATPHLDXXXXXXXXXXXXMDTVFRIEKQAGSEDGKPCCLVKIVDCGEGSEKK 945
           SQFFITLK   HLD            MD V +IE Q GS  G+P   VKIVDCGE SE K
Sbjct: 121 SQFFITLKPQAHLDGKHVVFGKVVKGMDIVKKIE-QVGSARGQPARPVKIVDCGETSESK 179

Query: 946 I 948
           I
Sbjct: 180 I 180


>ref|XP_002520955.1| cyclophilin, putative [Ricinus communis] gi|223539792|gb|EEF41372.1|
            cyclophilin, putative [Ricinus communis]
          Length = 688

 Score =  232 bits (592), Expect = 4e-58
 Identities = 126/210 (60%), Positives = 141/210 (67%)
 Frame = +1

Query: 406  MAKSKNPLVFLDVVIDGGRPEKIVIELFSDVVPKTAENFRALCTGEKGTGPCTKKQLHFK 585
            M+K KNPLV+ DV IDG   E+IVIELF+DV PKTAENFRALCTGE G G  T K LH+K
Sbjct: 1    MSKKKNPLVYFDVSIDGDPVERIVIELFADVAPKTAENFRALCTGEMGIGKTTGKPLHYK 60

Query: 586  GSLFHRIIKGFMVQGGDFSKRDGTGGESIWGGRFADENFKLSHNEAGLLSMANAGKHTNG 765
            GS FHRIIKGFM QGGDFSK +GTGGESI+GG+F+DENF L H+ AG LSMAN+G +TNG
Sbjct: 61   GSFFHRIIKGFMAQGGDFSKGNGTGGESIYGGKFSDENFILKHDGAGFLSMANSGPNTNG 120

Query: 766  SQFFITLKATPHLDXXXXXXXXXXXXMDTVFRIEKQAGSEDGKPCCLVKIVDCGEGSEKK 945
            SQFFIT K  P LD            ++ V RIE Q G+ DGKP   VKIVDCGE SE K
Sbjct: 121  SQFFITFKRQPQLDRKHVVFGKVIKGIEVVKRIE-QLGTADGKPVHPVKIVDCGETSENK 179

Query: 946  INXXXXXXXXXXXXXXXXXXSFSDDSSDEK 1035
            I                     SD SSDEK
Sbjct: 180  IQ--DTVGKDAGKKKKSGKVPLSDSSSDEK 207


>emb|CAN75764.1| hypothetical protein VITISV_034442 [Vitis vinifera]
          Length = 786

 Score =  232 bits (591), Expect = 5e-58
 Identities = 132/237 (55%), Positives = 147/237 (62%), Gaps = 27/237 (11%)
 Frame = +1

Query: 406  MAKSKNPLVFLDVVIDGGRPEKIVIELFSDVVPKTAENFRALCTGEKGTGPCTKKQLHFK 585
            M K KNPLVFLDV IDG   EKIVIELF+DVVPKTAENFRALCTGEKG G  T K LH+K
Sbjct: 1    MTKKKNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGVGTSTGKPLHYK 60

Query: 586  GSLFHRIIKGFMVQGGDFSKRDG---------------------------TGGESIWGGR 684
            GS FHRIIKGFM QGGDFSK +G                           TGGESI+GG+
Sbjct: 61   GSFFHRIIKGFMAQGGDFSKGNGMCFLFPSSIASVDAYSLFDLYLNAQTCTGGESIYGGK 120

Query: 685  FADENFKLSHNEAGLLSMANAGKHTNGSQFFITLKATPHLDXXXXXXXXXXXXMDTVFRI 864
            FADENFK +H   G LSMAN+G +TNGSQFF+T K  PHLD            +DT+ +I
Sbjct: 121  FADENFKRAHEGPGFLSMANSGPNTNGSQFFMTFKRQPHLDGKHVVFGKVVQGIDTLKKI 180

Query: 865  EKQAGSEDGKPCCLVKIVDCGEGSEKKINXXXXXXXXXXXXXXXXXXSFSDDSSDEK 1035
            E Q G+ DGKP  LVKIVDCGE SE KI+                    SDDSSDE+
Sbjct: 181  E-QLGTGDGKPARLVKIVDCGETSENKIHGAVGTEKGRKKKSGKALS--SDDSSDEQ 234



 Score = 75.9 bits (185), Expect = 6e-11
 Identities = 63/218 (28%), Positives = 85/218 (38%), Gaps = 6/218 (2%)
 Frame = +1

Query: 1348 TDSGISESDDDVAHPQESAPAAFINSLHDEIKSSEDPAVDKHPPQPISRKADIDR----- 1512
            T S  S SDD+ A    SA     NS H E          KHP     +   +++     
Sbjct: 386  TSSSRSSSDDEKASXHVSAHKTS-NSTHTE---------SKHPXNLGKKTGALEQDTIAK 435

Query: 1513 -QKKDGLKLAKDDSSHEEGEFAQEKGDHLNNGHDTEMKLDKIENKYPDSDNEXXXXXXXX 1689
             QK   LK+++DDSSHEEGEF+Q K + LNNGH TE K +K   ++P SD+         
Sbjct: 436  PQKDHELKMSEDDSSHEEGEFSQ-KNELLNNGHGTEAKSEKTAKQHPLSDDSGKSRSLTP 494

Query: 1690 XXXXXYQXXXXXXXXXXXXXXXXXXXXXXXXXXXAGRYSRQTNXXXXXXXXXXXXXXXXX 1869
                  +                             R S + N                 
Sbjct: 495  SPRRRAKISPRRNPSISPKKISTMSPRYQHDSRSPARKSGKRNQGNSRSPLGSPARKATE 554

Query: 1870 XXVAXXXXXXXXXXXPNGNPKRIRRGRGFTERYASARK 1983
               +           PNG PKRIR+GRGFT+R++ AR+
Sbjct: 555  PPASNHGRGLSRSPSPNGAPKRIRKGRGFTDRFSFARR 592


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