BLASTX nr result

ID: Coptis21_contig00000357 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000357
         (545 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532258.1| hypothetical protein RCOM_0624800 [Ricinus c...    67   2e-09
emb|CBI16250.3| unnamed protein product [Vitis vinifera]               61   1e-07
ref|XP_002282000.1| PREDICTED: uncharacterized protein LOC100255...    61   1e-07
ref|XP_003606507.1| hypothetical protein MTR_4g061110 [Medicago ...    59   6e-07

>ref|XP_002532258.1| hypothetical protein RCOM_0624800 [Ricinus communis]
           gi|223528046|gb|EEF30124.1| hypothetical protein
           RCOM_0624800 [Ricinus communis]
          Length = 1044

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 35/68 (51%), Positives = 46/68 (67%)
 Frame = +1

Query: 286 SSCSLEEQHINMKENILSSGGPNQIKRRKKRGCYNLRKSLAWNNAFLTEQGVLNPQELSR 465
           S+ + E  ++N +E    S  P Q+KR+KK G YNLRKSLAW+ AF TE+GVL+P ELS 
Sbjct: 84  SNMNKENVNLNKEEGTKLSIEPQQMKRKKKGGGYNLRKSLAWDRAFFTEEGVLDPLELSM 143

Query: 466 IVGLSGIS 489
           + G  G S
Sbjct: 144 LSGNLGKS 151


>emb|CBI16250.3| unnamed protein product [Vitis vinifera]
          Length = 1132

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 28/42 (66%), Positives = 34/42 (80%)
 Frame = +1

Query: 349 PNQIKRRKKRGCYNLRKSLAWNNAFLTEQGVLNPQELSRIVG 474
           P Q+K+RKK G YNLR+SLAW+ AF TE+GVLNP ELS + G
Sbjct: 42  PQQMKKRKKGGGYNLRQSLAWDRAFFTEEGVLNPLELSVVSG 83


>ref|XP_002282000.1| PREDICTED: uncharacterized protein LOC100255365 [Vitis vinifera]
          Length = 1413

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 28/42 (66%), Positives = 34/42 (80%)
 Frame = +1

Query: 349 PNQIKRRKKRGCYNLRKSLAWNNAFLTEQGVLNPQELSRIVG 474
           P Q+K+RKK G YNLR+SLAW+ AF TE+GVLNP ELS + G
Sbjct: 97  PQQMKKRKKGGGYNLRQSLAWDRAFFTEEGVLNPLELSVVSG 138


>ref|XP_003606507.1| hypothetical protein MTR_4g061110 [Medicago truncatula]
           gi|355507562|gb|AES88704.1| hypothetical protein
           MTR_4g061110 [Medicago truncatula]
          Length = 1527

 Score = 58.5 bits (140), Expect = 6e-07
 Identities = 28/38 (73%), Positives = 31/38 (81%)
 Frame = +1

Query: 361 KRRKKRGCYNLRKSLAWNNAFLTEQGVLNPQELSRIVG 474
           KR+KK G +NLRKSLAW+ AF TEQGVLNP ELS I G
Sbjct: 93  KRKKKLGGFNLRKSLAWDRAFFTEQGVLNPLELSMISG 130


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