BLASTX nr result

ID: Coptis21_contig00000355 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000355
         (882 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510992.1| Rho GTPase activator, putative [Ricinus comm...   375   e-102
ref|XP_002328831.1| predicted protein [Populus trichocarpa] gi|2...   374   e-101
ref|XP_004146905.1| PREDICTED: uncharacterized Rho GTPase-activa...   365   6e-99
ref|NP_001242623.1| uncharacterized protein LOC100810167 [Glycin...   364   2e-98
ref|NP_001190587.1| uncharacterized Rho GTPase-activating protei...   363   2e-98

>ref|XP_002510992.1| Rho GTPase activator, putative [Ricinus communis]
           gi|223550107|gb|EEF51594.1| Rho GTPase activator,
           putative [Ricinus communis]
          Length = 369

 Score =  375 bits (962), Expect = e-102
 Identities = 200/292 (68%), Positives = 234/292 (80%)
 Frame = +2

Query: 2   KLKEARQTAGPIXXXXXXXXXXXXXXXXGRVGSLMKSRWSIIQQVTQRPRSREAMQERLI 181
           KLKEA Q+AG +                 RVGS +KS+W+ +++    P +R  +QE+LI
Sbjct: 14  KLKEAGQSAGTLVGDFAKDAKVNVADAAERVGSAVKSQWTFLRE----PATRHILQEQLI 69

Query: 182 CAAASTGTLLRKGIYETKEKVSVGKIKVEEVAKKTAQKSKTILTNIERRQKGVASTDVFG 361
            AAA+TG  LRKG+  TK+KV+VGK KVEEVAK+TAQKSKTILT+IER QKGVASTDVFG
Sbjct: 70  TAAATTGMFLRKGMSGTKDKVAVGKTKVEEVAKRTAQKSKTILTDIERWQKGVASTDVFG 129

Query: 362 VPIEVTVQRQESSRPIPHVLVKCADCLVLSGLNTENLFKYEGDRKTIQMLISLFNEDWNA 541
           VPIEVTVQRQESSRPIPH+LVKCAD L+LSGLN+  LFK EGD K IQ LIS++N+D +A
Sbjct: 130 VPIEVTVQRQESSRPIPHILVKCADYLILSGLNSMQLFKAEGDIKAIQQLISIYNQDASA 189

Query: 542 SLPEGVNSLDVATLLKCYLASLPEPLTTFLLYHEIRGARSSIHAMRNILKKLPNVNYMTL 721
           SLPEGVN LDVA L+K YLASLPEPLTTF LY+EI+GARSSI+AM+NILKKLP VNYMTL
Sbjct: 190 SLPEGVNPLDVAALIKFYLASLPEPLTTFELYNEIKGARSSIYAMKNILKKLPTVNYMTL 249

Query: 722 EFITALLLRVSQKSTLNKMDARSLAMEMAPLIIWQMGQKPAYFDQFGHQTSR 877
           E ITALLLRVSQKS LNKMDARSLAME AP+I+W+  QKP  + QF +Q SR
Sbjct: 250 ELITALLLRVSQKSLLNKMDARSLAMETAPVIMWRKEQKPEIYRQFWNQASR 301


>ref|XP_002328831.1| predicted protein [Populus trichocarpa] gi|222839129|gb|EEE77480.1|
           predicted protein [Populus trichocarpa]
          Length = 377

 Score =  374 bits (960), Expect = e-101
 Identities = 197/292 (67%), Positives = 232/292 (79%)
 Frame = +2

Query: 2   KLKEARQTAGPIXXXXXXXXXXXXXXXXGRVGSLMKSRWSIIQQVTQRPRSREAMQERLI 181
           KLKEA Q+AG                   +VGS +K+RW+I+++    P +R AMQERLI
Sbjct: 23  KLKEAGQSAGTFVGEVAKDAKGNVADVAEKVGSAVKTRWAILRE----PSTRHAMQERLI 78

Query: 182 CAAASTGTLLRKGIYETKEKVSVGKIKVEEVAKKTAQKSKTILTNIERRQKGVASTDVFG 361
            AAA+TG   RKGI ETK+KV+VGK KVEEVAKKTAQKSKTILT+IER QKGVASTDVFG
Sbjct: 79  TAAATTGMFFRKGISETKDKVTVGKTKVEEVAKKTAQKSKTILTDIERWQKGVASTDVFG 138

Query: 362 VPIEVTVQRQESSRPIPHVLVKCADCLVLSGLNTENLFKYEGDRKTIQMLISLFNEDWNA 541
           VPIEVTVQRQE S+ +PH+LVKCAD L+LSGLN+ +LFK EGD+K IQ L+SL+N+D NA
Sbjct: 139 VPIEVTVQRQEFSKLVPHILVKCADYLILSGLNSVDLFKAEGDKKVIQQLVSLYNQDSNA 198

Query: 542 SLPEGVNSLDVATLLKCYLASLPEPLTTFLLYHEIRGARSSIHAMRNILKKLPNVNYMTL 721
           SLPEG+N +DVA L KCYLASLPEPLTTF LY EI+GARSSIH M+NILKKLP VNYMTL
Sbjct: 199 SLPEGLNPIDVAFLAKCYLASLPEPLTTFELYDEIKGARSSIHVMKNILKKLPAVNYMTL 258

Query: 722 EFITALLLRVSQKSTLNKMDARSLAMEMAPLIIWQMGQKPAYFDQFGHQTSR 877
           EFITALLLRVSQKS LNKMDAR++A EMAP+I+WQ  +KP  +  + +  SR
Sbjct: 259 EFITALLLRVSQKSLLNKMDARAIATEMAPVIMWQKERKPETYRSYWNNLSR 310


>ref|XP_004146905.1| PREDICTED: uncharacterized Rho GTPase-activating protein
           At5g61530-like [Cucumis sativus]
          Length = 383

 Score =  365 bits (938), Expect = 6e-99
 Identities = 189/286 (66%), Positives = 228/286 (79%)
 Frame = +2

Query: 2   KLKEARQTAGPIXXXXXXXXXXXXXXXXGRVGSLMKSRWSIIQQVTQRPRSREAMQERLI 181
           KLKEA  +AG                   RVG+L KSRW+++QQ    P +R A+QERLI
Sbjct: 27  KLKEAGHSAGNFVEEVAKDAKGNAADVAERVGTLFKSRWALLQQ----PATRHAVQERLI 82

Query: 182 CAAASTGTLLRKGIYETKEKVSVGKIKVEEVAKKTAQKSKTILTNIERRQKGVASTDVFG 361
            AAA+TGT  RKG+ ETK+KV VGK+KVEEVAKKTAQKSKTILT+IER QKGVASTDVFG
Sbjct: 83  SAAATTGTFFRKGVSETKDKVVVGKVKVEEVAKKTAQKSKTILTDIERWQKGVASTDVFG 142

Query: 362 VPIEVTVQRQESSRPIPHVLVKCADCLVLSGLNTENLFKYEGDRKTIQMLISLFNEDWNA 541
           V IEVTVQ+Q+SSR IPH+LV+CAD LVLSGLN+  LFK +GD+K +Q L+S++N+D NA
Sbjct: 143 VSIEVTVQKQQSSRVIPHILVRCADYLVLSGLNSPWLFKSDGDKKVLQQLVSMYNQDPNA 202

Query: 542 SLPEGVNSLDVATLLKCYLASLPEPLTTFLLYHEIRGARSSIHAMRNILKKLPNVNYMTL 721
            LPEG N +DVA L KCYLASLPEPL TF LY+EIRGAR+SI+A+RNI KKLPNVNYMTL
Sbjct: 203 PLPEGTNPVDVAALAKCYLASLPEPLVTFELYNEIRGARTSINALRNIFKKLPNVNYMTL 262

Query: 722 EFITALLLRVSQKSTLNKMDARSLAMEMAPLIIWQMGQKPAYFDQF 859
           EF TALLLRVSQK+ LNKMDARSL+MEM P+I+WQ  ++P ++ ++
Sbjct: 263 EFTTALLLRVSQKALLNKMDARSLSMEMTPIIMWQNDRRPEFYREY 308


>ref|NP_001242623.1| uncharacterized protein LOC100810167 [Glycine max]
           gi|255635720|gb|ACU18209.1| unknown [Glycine max]
          Length = 379

 Score =  364 bits (934), Expect = 2e-98
 Identities = 188/292 (64%), Positives = 232/292 (79%)
 Frame = +2

Query: 2   KLKEARQTAGPIXXXXXXXXXXXXXXXXGRVGSLMKSRWSIIQQVTQRPRSREAMQERLI 181
           KLKEA+++AG                  GRVGS++KSRW+++QQ    P +R A+Q+R I
Sbjct: 23  KLKEAKESAGTFVGEVTKDTKSNVAEVAGRVGSMVKSRWALLQQ----PSTRHAVQDRFI 78

Query: 182 CAAASTGTLLRKGIYETKEKVSVGKIKVEEVAKKTAQKSKTILTNIERRQKGVASTDVFG 361
            AAA+TGTLLR+G   TK+KV VGK KVEEVAK TAQKSKTILT+IER QKG+ASTD+FG
Sbjct: 79  SAAATTGTLLRRGFSGTKDKVVVGKSKVEEVAKITAQKSKTILTDIERWQKGIASTDLFG 138

Query: 362 VPIEVTVQRQESSRPIPHVLVKCADCLVLSGLNTENLFKYEGDRKTIQMLISLFNEDWNA 541
           VPIEVT QRQ+ S+PIP +LVKC D L++SGLN+ NLFK EGD+K I  L+SL+N+D  A
Sbjct: 139 VPIEVTAQRQDCSKPIPQILVKCGDYLIVSGLNSPNLFKSEGDKKVIHQLVSLYNQDSTA 198

Query: 542 SLPEGVNSLDVATLLKCYLASLPEPLTTFLLYHEIRGARSSIHAMRNILKKLPNVNYMTL 721
           S+PEG N +DVA L+K YLASLPEPLTT  LY+EIR ARSSI++MRNILK+L +VNYMTL
Sbjct: 199 SVPEGTNPVDVAALVKYYLASLPEPLTTLELYNEIRSARSSIYSMRNILKRLSSVNYMTL 258

Query: 722 EFITALLLRVSQKSTLNKMDARSLAMEMAPLIIWQMGQKPAYFDQFGHQTSR 877
           EFITALLLRVSQKS LNKMDARSLAMEMAP+I+WQ  ++P ++ Q+ +Q S+
Sbjct: 259 EFITALLLRVSQKSLLNKMDARSLAMEMAPVIMWQKERRPEFYHQYWNQVSK 310


>ref|NP_001190587.1| uncharacterized Rho GTPase-activating protein [Arabidopsis
           thaliana] gi|332010099|gb|AED97482.1| uncharacterized
           Rho GTPase-activating protein [Arabidopsis thaliana]
          Length = 376

 Score =  363 bits (933), Expect = 2e-98
 Identities = 196/292 (67%), Positives = 227/292 (77%)
 Frame = +2

Query: 2   KLKEARQTAGPIXXXXXXXXXXXXXXXXGRVGSLMKSRWSIIQQVTQRPRSREAMQERLI 181
           KL+EA QTAG                   RVGSL KSRW+I+QQ    P +R A+QE LI
Sbjct: 23  KLREAGQTAGSFVGEVAKDAKVNVADVAERVGSLFKSRWAILQQ----PATRHAVQEHLI 78

Query: 182 CAAASTGTLLRKGIYETKEKVSVGKIKVEEVAKKTAQKSKTILTNIERRQKGVASTDVFG 361
            AAA+TGT +RKGI ETKEKVSVGKIKVEE AKKTAQKSKTILT+IER QKGVAS+DVFG
Sbjct: 79  TAAATTGTFVRKGITETKEKVSVGKIKVEEAAKKTAQKSKTILTDIERWQKGVASSDVFG 138

Query: 362 VPIEVTVQRQESSRPIPHVLVKCADCLVLSGLNTENLFKYEGDRKTIQMLISLFNEDWNA 541
           V IE+TVQRQESSRPIP +LVKCAD L+L+GLN+ NLFK EGDRK IQ L+S +N+D  A
Sbjct: 139 VAIEITVQRQESSRPIPLILVKCADYLILTGLNSPNLFKAEGDRKLIQQLVSAYNQDPRA 198

Query: 542 SLPEGVNSLDVATLLKCYLASLPEPLTTFLLYHEIRGARSSIHAMRNILKKLPNVNYMTL 721
           S+PEGVN +DVA LLK YLASLP PLTTF LY+EI+ ARSSIH MR  L+KL NVNY TL
Sbjct: 199 SIPEGVNPVDVAALLKYYLASLPTPLTTFELYNEIKDARSSIHRMRQSLQKLSNVNYNTL 258

Query: 722 EFITALLLRVSQKSTLNKMDARSLAMEMAPLIIWQMGQKPAYFDQFGHQTSR 877
           EFITALLLRVSQKS LNKMD+ SLAMEMAP+I+W+   +P  + ++  + SR
Sbjct: 259 EFITALLLRVSQKSLLNKMDSHSLAMEMAPVIMWREDNRPESYREYWRRPSR 310


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