BLASTX nr result

ID: Coptis21_contig00000353 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000353
         (1597 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304478.1| predicted protein [Populus trichocarpa] gi|2...   466   e-156
dbj|BAG09236.2| UDP-glucose 4-epimerase [Pisum sativum]               471   e-155
sp|Q43070.1|GALE1_PEA RecName: Full=UDP-glucose 4-epimerase; Alt...   469   e-154
ref|XP_002283103.1| PREDICTED: UDP-glucose 4-epimerase [Vitis vi...   465   e-154
ref|NP_172738.1| UDP-D-glucose/UDP-D-galactose 4-epimerase 1 [Ar...   464   e-153

>ref|XP_002304478.1| predicted protein [Populus trichocarpa] gi|222841910|gb|EEE79457.1|
           predicted protein [Populus trichocarpa]
          Length = 350

 Score =  466 bits (1198), Expect(2) = e-156
 Identities = 228/258 (88%), Positives = 244/258 (94%)
 Frame = +2

Query: 218 ILVTGGAGFIGTHTVVQLLNEGFGVTIIDNFDNSVEEAVVRVRGLVGDQLSKKLDFHLGD 397
           ILVTGGAGFIGTHTVVQLL EGF V+IIDN DNSV EAV RV+ +VG QLSK L+F+LGD
Sbjct: 6   ILVTGGAGFIGTHTVVQLLKEGFKVSIIDNLDNSVTEAVDRVKEVVGPQLSKNLEFNLGD 65

Query: 398 LRNKDDLDKLFSKNKFDAVIHFAGLKAVGESVANPQRYFDNNLVGTINLYEVMAKYGCKK 577
           LRNKDDL+KLFS+ KFDAVIHFAGLKAVGESVANP+RYFDNNLVGTINLYEVMAKY CKK
Sbjct: 66  LRNKDDLEKLFSRTKFDAVIHFAGLKAVGESVANPRRYFDNNLVGTINLYEVMAKYNCKK 125

Query: 578 MVFSSSATVYGQPEKIPCVEDFSLKAMNPYGRTKLFLEEIARDIQKAEPDWRIILLRYFN 757
           MVFSSSATVYGQPEKIPCVEDF+L AMNPYGRTKLFLEEIARDIQKAEP+W IILLRYFN
Sbjct: 126 MVFSSSATVYGQPEKIPCVEDFNLMAMNPYGRTKLFLEEIARDIQKAEPEWSIILLRYFN 185

Query: 758 PVGAHESGKIGEDPKGIPNNLMPYIQQVAVDRLPELNVYGHDYPTKDGSAVRDYIHVMDL 937
           PVGAHESGK+GEDPKGIPNNLMPYIQQVAV RLPELNVYGHDYPTKDGSAVRDYIHVMDL
Sbjct: 186 PVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRLPELNVYGHDYPTKDGSAVRDYIHVMDL 245

Query: 938 ADGHIAALRKLFTTENIG 991
           ADGH+AALRK+ T+++IG
Sbjct: 246 ADGHVAALRKISTSKDIG 263



 Score =  114 bits (284), Expect(2) = e-156
 Identities = 48/53 (90%), Positives = 52/53 (98%)
 Frame = +3

Query: 1074 LCPRRPGDATAVYASTEKAEKELGWKAKYGIEEMCRDQWKWASTNPYGYESKP 1232
            LCPRRPGDATAVYASTEKAE+ELGWKAKYG+EEMCRDQWKWAS NP+GY+SKP
Sbjct: 296  LCPRRPGDATAVYASTEKAERELGWKAKYGVEEMCRDQWKWASNNPWGYQSKP 348


>dbj|BAG09236.2| UDP-glucose 4-epimerase [Pisum sativum]
          Length = 350

 Score =  471 bits (1212), Expect(2) = e-155
 Identities = 229/258 (88%), Positives = 245/258 (94%)
 Frame = +2

Query: 218 ILVTGGAGFIGTHTVVQLLNEGFGVTIIDNFDNSVEEAVVRVRGLVGDQLSKKLDFHLGD 397
           ILVTGGAGFIGTHTVVQLLN GF V+IIDNFDNSV EAV RVR +VG  LS+ L+F LGD
Sbjct: 8   ILVTGGAGFIGTHTVVQLLNNGFNVSIIDNFDNSVMEAVERVREVVGSNLSQNLEFTLGD 67

Query: 398 LRNKDDLDKLFSKNKFDAVIHFAGLKAVGESVANPQRYFDNNLVGTINLYEVMAKYGCKK 577
           LRNKDDL+KLFSK+KFDAVIHFAGLKAVGESV NP+RYFDNNLVGTINLYEVMAK+ CKK
Sbjct: 68  LRNKDDLEKLFSKSKFDAVIHFAGLKAVGESVENPRRYFDNNLVGTINLYEVMAKHNCKK 127

Query: 578 MVFSSSATVYGQPEKIPCVEDFSLKAMNPYGRTKLFLEEIARDIQKAEPDWRIILLRYFN 757
           MVFSSSATVYGQPEKIPCVEDF L+AMNPYGRTKLFLEEIARDIQKAEP+WRI+LLRYFN
Sbjct: 128 MVFSSSATVYGQPEKIPCVEDFKLQAMNPYGRTKLFLEEIARDIQKAEPEWRIVLLRYFN 187

Query: 758 PVGAHESGKIGEDPKGIPNNLMPYIQQVAVDRLPELNVYGHDYPTKDGSAVRDYIHVMDL 937
           PVGAHESGK+GEDP+GIPNNLMPYIQQVAV RLPELNVYGHDYPT+DGSA+RDYIHVMDL
Sbjct: 188 PVGAHESGKLGEDPRGIPNNLMPYIQQVAVGRLPELNVYGHDYPTRDGSAIRDYIHVMDL 247

Query: 938 ADGHIAALRKLFTTENIG 991
           ADGHIAALRKLFT+ENIG
Sbjct: 248 ADGHIAALRKLFTSENIG 265



 Score =  105 bits (261), Expect(2) = e-155
 Identities = 44/53 (83%), Positives = 46/53 (86%)
 Frame = +3

Query: 1074 LCPRRPGDATAVYASTEKAEKELGWKAKYGIEEMCRDQWKWASTNPYGYESKP 1232
            LCPRRPGDAT VYAST KAEKELGWKAKYG+EEMCRDQW WA  NP+GY  KP
Sbjct: 298  LCPRRPGDATEVYASTAKAEKELGWKAKYGVEEMCRDQWNWAKNNPWGYSGKP 350


>sp|Q43070.1|GALE1_PEA RecName: Full=UDP-glucose 4-epimerase; AltName:
           Full=Galactowaldenase; AltName: Full=UDP-galactose
           4-epimerase gi|1173555|gb|AAA86532.1|
           UDP-galactose-4-epimerase [Pisum sativum]
          Length = 350

 Score =  469 bits (1206), Expect(2) = e-154
 Identities = 228/258 (88%), Positives = 244/258 (94%)
 Frame = +2

Query: 218 ILVTGGAGFIGTHTVVQLLNEGFGVTIIDNFDNSVEEAVVRVRGLVGDQLSKKLDFHLGD 397
           ILVTG AGFIGTHTVVQLLN GF V+IIDNFDNSV EAV RVR +VG  LS+ L+F LGD
Sbjct: 8   ILVTGSAGFIGTHTVVQLLNNGFNVSIIDNFDNSVMEAVERVREVVGSNLSQNLEFTLGD 67

Query: 398 LRNKDDLDKLFSKNKFDAVIHFAGLKAVGESVANPQRYFDNNLVGTINLYEVMAKYGCKK 577
           LRNKDDL+KLFSK+KFDAVIHFAGLKAVGESV NP+RYFDNNLVGTINLYEVMAK+ CKK
Sbjct: 68  LRNKDDLEKLFSKSKFDAVIHFAGLKAVGESVENPRRYFDNNLVGTINLYEVMAKHNCKK 127

Query: 578 MVFSSSATVYGQPEKIPCVEDFSLKAMNPYGRTKLFLEEIARDIQKAEPDWRIILLRYFN 757
           MVFSSSATVYGQPEKIPCVEDF L+AMNPYGRTKLFLEEIARDIQKAEP+WRI+LLRYFN
Sbjct: 128 MVFSSSATVYGQPEKIPCVEDFKLQAMNPYGRTKLFLEEIARDIQKAEPEWRIVLLRYFN 187

Query: 758 PVGAHESGKIGEDPKGIPNNLMPYIQQVAVDRLPELNVYGHDYPTKDGSAVRDYIHVMDL 937
           PVGAHESGK+GEDP+GIPNNLMPYIQQVAV RLPELNVYGHDYPT+DGSA+RDYIHVMDL
Sbjct: 188 PVGAHESGKLGEDPRGIPNNLMPYIQQVAVGRLPELNVYGHDYPTRDGSAIRDYIHVMDL 247

Query: 938 ADGHIAALRKLFTTENIG 991
           ADGHIAALRKLFT+ENIG
Sbjct: 248 ADGHIAALRKLFTSENIG 265



 Score =  105 bits (261), Expect(2) = e-154
 Identities = 44/53 (83%), Positives = 46/53 (86%)
 Frame = +3

Query: 1074 LCPRRPGDATAVYASTEKAEKELGWKAKYGIEEMCRDQWKWASTNPYGYESKP 1232
            LCPRRPGDAT VYAST KAEKELGWKAKYG+EEMCRDQW WA  NP+GY  KP
Sbjct: 298  LCPRRPGDATEVYASTAKAEKELGWKAKYGVEEMCRDQWNWAKNNPWGYSGKP 350


>ref|XP_002283103.1| PREDICTED: UDP-glucose 4-epimerase [Vitis vinifera]
           gi|297742582|emb|CBI34731.3| unnamed protein product
           [Vitis vinifera]
          Length = 350

 Score =  465 bits (1196), Expect(2) = e-154
 Identities = 226/258 (87%), Positives = 244/258 (94%)
 Frame = +2

Query: 218 ILVTGGAGFIGTHTVVQLLNEGFGVTIIDNFDNSVEEAVVRVRGLVGDQLSKKLDFHLGD 397
           ILVTGGAGFIGTHTVVQLL+EGF V IIDN DNSV EA+ RVR LVG +LS+KL F+LGD
Sbjct: 8   ILVTGGAGFIGTHTVVQLLSEGFTVWIIDNLDNSVLEAIERVRDLVGAELSRKLHFNLGD 67

Query: 398 LRNKDDLDKLFSKNKFDAVIHFAGLKAVGESVANPQRYFDNNLVGTINLYEVMAKYGCKK 577
           LRNK DL+KLFS+ KFDAVIHFAGLKAVGESV NP+RYFDNNL+GTINLYE+MAKY CKK
Sbjct: 68  LRNKADLEKLFSQTKFDAVIHFAGLKAVGESVVNPRRYFDNNLIGTINLYEIMAKYNCKK 127

Query: 578 MVFSSSATVYGQPEKIPCVEDFSLKAMNPYGRTKLFLEEIARDIQKAEPDWRIILLRYFN 757
           MVFSSSATVYGQP+KIPCVEDF+L AMNPYGRTKLFLEEIARDIQKAEPDW+IILLRYFN
Sbjct: 128 MVFSSSATVYGQPDKIPCVEDFNLMAMNPYGRTKLFLEEIARDIQKAEPDWKIILLRYFN 187

Query: 758 PVGAHESGKIGEDPKGIPNNLMPYIQQVAVDRLPELNVYGHDYPTKDGSAVRDYIHVMDL 937
           PVGAHESGK+GEDPKGIPNNLMPYIQQVAV RLPELNVYGHDYPT+DGSA+RDYIHVMDL
Sbjct: 188 PVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRLPELNVYGHDYPTRDGSAIRDYIHVMDL 247

Query: 938 ADGHIAALRKLFTTENIG 991
           ADGHIAALRKLFT+E+IG
Sbjct: 248 ADGHIAALRKLFTSEDIG 265



 Score =  107 bits (266), Expect(2) = e-154
 Identities = 47/53 (88%), Positives = 48/53 (90%)
 Frame = +3

Query: 1074 LCPRRPGDATAVYASTEKAEKELGWKAKYGIEEMCRDQWKWASTNPYGYESKP 1232
            LCPRR GDATAVYASTEKA KELGWKAKYGI EMCRDQWKWAS NP+GY SKP
Sbjct: 298  LCPRRAGDATAVYASTEKAAKELGWKAKYGIAEMCRDQWKWASNNPWGYHSKP 350


>ref|NP_172738.1| UDP-D-glucose/UDP-D-galactose 4-epimerase 1 [Arabidopsis thaliana]
           gi|12643760|sp|Q42605.2|GALE1_ARATH RecName:
           Full=UDP-glucose 4-epimerase 1; AltName:
           Full=Galactowaldenase 1; AltName: Full=UDP-galactose
           4-epimerase 1 gi|8698725|gb|AAF78483.1|AC012187_3 Strong
           similarity to UDPglucose 4-epimerase from Arabidopsis
           thaliana gi|2129759 and is a member of the NAD dependent
           Epimerase/Dehydratase PF|01370 family. ESTs gb|AI100184,
           gb|T22969, gb|T22968, gb|H76416, gb|AI998807 come from
           this gene [Arabidopsis thaliana]
           gi|12248021|gb|AAG50102.1|AF334724_1 putative uridine
           diphosphate glucose epimerase [Arabidopsis thaliana]
           gi|15809880|gb|AAL06868.1| At1g12780/F13K23_21
           [Arabidopsis thaliana] gi|21539429|gb|AAM53267.1|
           uridine diphosphate glucose epimerase [Arabidopsis
           thaliana] gi|23197648|gb|AAN15351.1| uridine diphosphate
           glucose epimerase [Arabidopsis thaliana]
           gi|332190807|gb|AEE28928.1|
           UDP-D-glucose/UDP-D-galactose 4-epimerase 1 [Arabidopsis
           thaliana]
          Length = 351

 Score =  464 bits (1194), Expect(2) = e-153
 Identities = 229/261 (87%), Positives = 240/261 (91%)
 Frame = +2

Query: 209 KNNILVTGGAGFIGTHTVVQLLNEGFGVTIIDNFDNSVEEAVVRVRGLVGDQLSKKLDFH 388
           + NILVTGGAGFIGTHTVVQLL +GF V+IIDNFDNSV EAV RVR LVG  LSKKLDF+
Sbjct: 6   EQNILVTGGAGFIGTHTVVQLLKDGFKVSIIDNFDNSVIEAVDRVRELVGPDLSKKLDFN 65

Query: 389 LGDLRNKDDLDKLFSKNKFDAVIHFAGLKAVGESVANPQRYFDNNLVGTINLYEVMAKYG 568
           LGDLRNK D++KLFSK +FDAVIHFAGLKAVGESV NP+RYFDNNLVGTINLYE MAKY 
Sbjct: 66  LGDLRNKGDIEKLFSKQRFDAVIHFAGLKAVGESVENPRRYFDNNLVGTINLYETMAKYN 125

Query: 569 CKKMVFSSSATVYGQPEKIPCVEDFSLKAMNPYGRTKLFLEEIARDIQKAEPDWRIILLR 748
           CK MVFSSSATVYGQPEKIPC+EDF LKAMNPYGRTKLFLEEIARDIQKAEP+WRIILLR
Sbjct: 126 CKMMVFSSSATVYGQPEKIPCMEDFELKAMNPYGRTKLFLEEIARDIQKAEPEWRIILLR 185

Query: 749 YFNPVGAHESGKIGEDPKGIPNNLMPYIQQVAVDRLPELNVYGHDYPTKDGSAVRDYIHV 928
           YFNPVGAHESG IGEDPKGIPNNLMPYIQQVAV RLPELNVYGHDYPT+DGSAVRDYIHV
Sbjct: 186 YFNPVGAHESGSIGEDPKGIPNNLMPYIQQVAVGRLPELNVYGHDYPTEDGSAVRDYIHV 245

Query: 929 MDLADGHIAALRKLFTTENIG 991
           MDLADGHIAALRKLF    IG
Sbjct: 246 MDLADGHIAALRKLFADPKIG 266



 Score =  105 bits (263), Expect(2) = e-153
 Identities = 44/52 (84%), Positives = 50/52 (96%)
 Frame = +3

Query: 1074 LCPRRPGDATAVYASTEKAEKELGWKAKYGIEEMCRDQWKWASTNPYGYESK 1229
            LCPRR GDATAVYASTEKAEKELGWKAKYG++EMCRDQWKWA+ NP+GY++K
Sbjct: 299  LCPRRSGDATAVYASTEKAEKELGWKAKYGVDEMCRDQWKWANNNPWGYQNK 350


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