BLASTX nr result

ID: Coptis21_contig00000352 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000352
         (935 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK59275.1|AF378571_1 thaumatin-like protein [Sambucus nigra]      355   e-101
ref|XP_002325077.1| predicted protein [Populus trichocarpa] gi|2...   344   6e-98
gb|ACZ67185.1| pathogenesis-related thaumatin, partial [Populus ...   343   1e-97
ref|XP_002299521.1| predicted protein [Populus trichocarpa] gi|2...   343   1e-97
gb|AAU95244.1| putative thaumatin-like protein [Solanum tuberosum]    348   1e-97

>gb|AAK59275.1|AF378571_1 thaumatin-like protein [Sambucus nigra]
          Length = 226

 Score =  355 bits (910), Expect(2) = e-101
 Identities = 157/183 (85%), Positives = 168/183 (91%)
 Frame = -3

Query: 933 YTVWAAAVPGGGRQLNPGQSWTLNVNAGTVQARIWGRTNCNFDGSGRGRCETGDCNGLLS 754
           +TVWAAAVPGGGRQLN GQ W+L+V AGT  ARIW RTNCNFDG+GRGRC+TGDCNGLLS
Sbjct: 35  FTVWAAAVPGGGRQLNRGQVWSLDVPAGTRGARIWARTNCNFDGAGRGRCQTGDCNGLLS 94

Query: 753 CQGFGQPPNTLAEYALNQFNNLDFFDISLVDGFNIPMDFSPLSGGCRGILCTADINGQCP 574
           CQ +G PPNTLAEYALNQFNNLDFFDISLVDGFN+ MDFSP  G  RGI CTADINGQCP
Sbjct: 95  CQAYGAPPNTLAEYALNQFNNLDFFDISLVDGFNVAMDFSPTGGCARGIQCTADINGQCP 154

Query: 573 NELRAPGGCNNPCTVFKTNEYCCTNGQGSCGPTNYSRFFKERCPDAYSYPQDDPTSTFTC 394
           NELRAPGGCNNPCTV++TNEYCCTNGQG+CGPTN+SRFFKERC DAYSYPQDDPTSTFTC
Sbjct: 155 NELRAPGGCNNPCTVYRTNEYCCTNGQGTCGPTNFSRFFKERCRDAYSYPQDDPTSTFTC 214

Query: 393 PGG 385
           PGG
Sbjct: 215 PGG 217



 Score = 40.8 bits (94), Expect(2) = e-101
 Identities = 16/17 (94%), Positives = 16/17 (94%)
 Frame = -1

Query: 323 STFTCPGGGNYRVVFCP 273
           STFTCPGG NYRVVFCP
Sbjct: 210 STFTCPGGTNYRVVFCP 226


>ref|XP_002325077.1| predicted protein [Populus trichocarpa] gi|222866511|gb|EEF03642.1|
           predicted protein [Populus trichocarpa]
          Length = 225

 Score =  344 bits (882), Expect(2) = 6e-98
 Identities = 152/183 (83%), Positives = 163/183 (89%)
 Frame = -3

Query: 933 YTVWAAAVPGGGRQLNPGQSWTLNVNAGTVQARIWGRTNCNFDGSGRGRCETGDCNGLLS 754
           YTVWAAAVPGGGR+L PG+SWT+   AGT QARIWGRTNC FDG+GRG CETGDCNGLL 
Sbjct: 36  YTVWAAAVPGGGRRLGPGESWTITARAGTTQARIWGRTNCIFDGAGRGMCETGDCNGLLQ 95

Query: 753 CQGFGQPPNTLAEYALNQFNNLDFFDISLVDGFNIPMDFSPLSGGCRGILCTADINGQCP 574
           CQ FGQPPNTLAEYALNQFNNLDFFDISLVDGFN+PMDFSP+SG CRGI C ADINGQCP
Sbjct: 96  CQAFGQPPNTLAEYALNQFNNLDFFDISLVDGFNVPMDFSPVSGNCRGIRCAADINGQCP 155

Query: 573 NELRAPGGCNNPCTVFKTNEYCCTNGQGSCGPTNYSRFFKERCPDAYSYPQDDPTSTFTC 394
           N LRA GGCNNPCTVFKT++YCC +  GSC PTNYSRFFK+RCPDAYSYP+DD  STFTC
Sbjct: 156 NPLRASGGCNNPCTVFKTDQYCCNS--GSCEPTNYSRFFKQRCPDAYSYPKDDQRSTFTC 213

Query: 393 PGG 385
           PGG
Sbjct: 214 PGG 216



 Score = 40.8 bits (94), Expect(2) = 6e-98
 Identities = 16/17 (94%), Positives = 16/17 (94%)
 Frame = -1

Query: 323 STFTCPGGGNYRVVFCP 273
           STFTCPGG NYRVVFCP
Sbjct: 209 STFTCPGGTNYRVVFCP 225


>gb|ACZ67185.1| pathogenesis-related thaumatin, partial [Populus deltoides]
          Length = 241

 Score =  343 bits (881), Expect(2) = 1e-97
 Identities = 153/187 (81%), Positives = 167/187 (89%), Gaps = 4/187 (2%)
 Frame = -3

Query: 933 YTVWAAAVPGGGRQLNPGQSWTLNVNAGTVQARIWGRTNCNFDGSGRGRCETGDCNGLLS 754
           YTVWAAA PGGGR+L+ GQ+W LNV AGT  ARIWGRTNCNFDGSGRGRC+TGDC G L 
Sbjct: 34  YTVWAAASPGGGRRLDRGQTWYLNVPAGTSMARIWGRTNCNFDGSGRGRCQTGDCTGGLE 93

Query: 753 CQGFGQPPNTLAEYALNQFNNLDFFDISLVDGFNIPMDFSPLSGG----CRGILCTADIN 586
           C+G+G PPNTLAEYALNQF NLDF+DISLVDGFNIPM+FSP S G    C+ +LCTADIN
Sbjct: 94  CKGWGVPPNTLAEYALNQFGNLDFYDISLVDGFNIPMEFSPTSSGGSGKCQALLCTADIN 153

Query: 585 GQCPNELRAPGGCNNPCTVFKTNEYCCTNGQGSCGPTNYSRFFKERCPDAYSYPQDDPTS 406
           GQCPNELRAPGGCNNPCTVFKTNEYCCTNGQGSCGPT +SRFFK+RCP +YSYPQDDP+S
Sbjct: 154 GQCPNELRAPGGCNNPCTVFKTNEYCCTNGQGSCGPTYFSRFFKDRCPTSYSYPQDDPSS 213

Query: 405 TFTCPGG 385
           TFTCPGG
Sbjct: 214 TFTCPGG 220



 Score = 40.4 bits (93), Expect(2) = 1e-97
 Identities = 15/17 (88%), Positives = 16/17 (94%)
 Frame = -1

Query: 323 STFTCPGGGNYRVVFCP 273
           STFTCPGG NYRV+FCP
Sbjct: 213 STFTCPGGTNYRVIFCP 229


>ref|XP_002299521.1| predicted protein [Populus trichocarpa] gi|222846779|gb|EEE84326.1|
           predicted protein [Populus trichocarpa]
          Length = 231

 Score =  343 bits (881), Expect(2) = 1e-97
 Identities = 153/187 (81%), Positives = 167/187 (89%), Gaps = 4/187 (2%)
 Frame = -3

Query: 933 YTVWAAAVPGGGRQLNPGQSWTLNVNAGTVQARIWGRTNCNFDGSGRGRCETGDCNGLLS 754
           YTVWAAA PGGGR+L+ GQ+W LNV AGT  ARIWGRTNCNFDGSGRGRC+TGDC G L 
Sbjct: 24  YTVWAAASPGGGRRLDRGQTWYLNVPAGTSMARIWGRTNCNFDGSGRGRCQTGDCTGGLE 83

Query: 753 CQGFGQPPNTLAEYALNQFNNLDFFDISLVDGFNIPMDFSPLSGG----CRGILCTADIN 586
           C+G+G PPNTLAEYALNQF NLDF+DISLVDGFNIPM+FSP S G    C+ +LCTADIN
Sbjct: 84  CKGWGVPPNTLAEYALNQFGNLDFYDISLVDGFNIPMEFSPTSSGGSGKCQALLCTADIN 143

Query: 585 GQCPNELRAPGGCNNPCTVFKTNEYCCTNGQGSCGPTNYSRFFKERCPDAYSYPQDDPTS 406
           GQCPNELRAPGGCNNPCTVFKTNEYCCTNGQGSCGPT +SRFFK+RCP +YSYPQDDP+S
Sbjct: 144 GQCPNELRAPGGCNNPCTVFKTNEYCCTNGQGSCGPTYFSRFFKDRCPTSYSYPQDDPSS 203

Query: 405 TFTCPGG 385
           TFTCPGG
Sbjct: 204 TFTCPGG 210



 Score = 40.4 bits (93), Expect(2) = 1e-97
 Identities = 15/17 (88%), Positives = 16/17 (94%)
 Frame = -1

Query: 323 STFTCPGGGNYRVVFCP 273
           STFTCPGG NYRV+FCP
Sbjct: 203 STFTCPGGTNYRVIFCP 219


>gb|AAU95244.1| putative thaumatin-like protein [Solanum tuberosum]
          Length = 227

 Score =  348 bits (894), Expect(2) = 1e-97
 Identities = 151/183 (82%), Positives = 165/183 (90%)
 Frame = -3

Query: 933 YTVWAAAVPGGGRQLNPGQSWTLNVNAGTVQARIWGRTNCNFDGSGRGRCETGDCNGLLS 754
           Y VWAAA PGGGR+L+ GQ+W LNVN GT+QARIWGRTNCNFDGSGRG+CETGDCNGLL 
Sbjct: 36  YPVWAAASPGGGRRLDSGQTWNLNVNPGTIQARIWGRTNCNFDGSGRGKCETGDCNGLLE 95

Query: 753 CQGFGQPPNTLAEYALNQFNNLDFFDISLVDGFNIPMDFSPLSGGCRGILCTADINGQCP 574
           CQG+G PPNTLAE+ALNQ NNLDF DISLVDGFNIPM+FSP++GGCR +LC A IN QCP
Sbjct: 96  CQGYGSPPNTLAEFALNQPNNLDFVDISLVDGFNIPMEFSPINGGCRNLLCNAPINDQCP 155

Query: 573 NELRAPGGCNNPCTVFKTNEYCCTNGQGSCGPTNYSRFFKERCPDAYSYPQDDPTSTFTC 394
           NELR PGGCNNPCTVFKTNE+CCTNG GSCGPT+ SRFFK+RCPDAYSYPQDDPTS FTC
Sbjct: 156 NELRTPGGCNNPCTVFKTNEFCCTNGPGSCGPTDLSRFFKQRCPDAYSYPQDDPTSLFTC 215

Query: 393 PGG 385
           P G
Sbjct: 216 PAG 218



 Score = 35.0 bits (79), Expect(2) = 1e-97
 Identities = 13/17 (76%), Positives = 14/17 (82%)
 Frame = -1

Query: 323 STFTCPGGGNYRVVFCP 273
           S FTCP G NY+VVFCP
Sbjct: 211 SLFTCPAGTNYKVVFCP 227


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