BLASTX nr result

ID: Coptis21_contig00000342 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000342
         (2129 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273782.1| PREDICTED: uncharacterized protein LOC100256...   786   0.0  
ref|XP_002321460.1| predicted protein [Populus trichocarpa] gi|2...   773   0.0  
ref|XP_002317932.1| predicted protein [Populus trichocarpa] gi|2...   761   0.0  
ref|XP_004154923.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   758   0.0  
ref|XP_004138227.1| PREDICTED: uncharacterized protein LOC101215...   746   0.0  

>ref|XP_002273782.1| PREDICTED: uncharacterized protein LOC100256061 [Vitis vinifera]
            gi|297734166|emb|CBI15413.3| unnamed protein product
            [Vitis vinifera]
          Length = 466

 Score =  786 bits (2030), Expect = 0.0
 Identities = 376/467 (80%), Positives = 405/467 (86%)
 Frame = -3

Query: 1908 MSWRRVGKSAQAVAAHGXXXXXXXXLVFKLDRVKFHSWWLVFAPLWLFHAVVARGRFSLP 1729
            MSWRRV KS QA+ AH         LV KL     +SWW++F PLWLFHAVVARGRFSLP
Sbjct: 1    MSWRRVAKSLQALTAHSLLLSFTLLLVLKLHHTISYSWWIIFFPLWLFHAVVARGRFSLP 60

Query: 1728 APSIPHDRHWAPCHAIVATPLLVAFELLLCIYLENIYVSGFAAVNLKVVFLPLLAFEIII 1549
            AP +PH+RHWAPCHA+VATPLL+AFELLLCIYLE+IY  G AAVNLK++FLPLLAFEI I
Sbjct: 61   APLVPHNRHWAPCHAVVATPLLIAFELLLCIYLESIYAYGHAAVNLKIIFLPLLAFEITI 120

Query: 1548 LIDNFRMCRALMPGDEESMSDEAIWETLPHFWVAISMVFFVAATTFTLLKLSGDVGALGW 1369
            L+DNFRMC+ALMPGDEESMSDEAIWETLPHFWVAISMVFFVAAT FTLLKL GD+GALGW
Sbjct: 121  LVDNFRMCKALMPGDEESMSDEAIWETLPHFWVAISMVFFVAATLFTLLKLCGDIGALGW 180

Query: 1368 WDLFINFGIAECFAFLVCTKWSNPVIHRQSYNREASSSSTAIRYLDWNSGLVVSSEEDSD 1189
            WDLFINFGIAE FAFLVCTKWSNPVIHR S+  EA SSST IRYLDWNSGLVVS++ED  
Sbjct: 181  WDLFINFGIAESFAFLVCTKWSNPVIHRNSHTTEAGSSSTTIRYLDWNSGLVVSTDEDQH 240

Query: 1188 QDRLCGLQDIGGHIMKIPLVGFQVLLCMRLEGTPPRARNIXXXXXXXXXXXLQGVGVLFA 1009
            QDR+CGLQDIGGHIMK+PL+GFQVLLCMRLEGTP  AR+I           LQG GVLF+
Sbjct: 241  QDRMCGLQDIGGHIMKVPLIGFQVLLCMRLEGTPAAARDIPIPVLFSPIFLLQGAGVLFS 300

Query: 1008 MSRLVEKIVLLLRSGAFTGRYFTISSRARDCFGFLHHGSRLLGWWSIDEGSREEQARIYH 829
             SRLVEKIVLLL +GA TGRYFT SSRA DCFGFLHHGSRLLGWWSIDEGSREEQAR+ H
Sbjct: 301  ASRLVEKIVLLLHNGAGTGRYFTYSSRAHDCFGFLHHGSRLLGWWSIDEGSREEQARLVH 360

Query: 828  SGTTGYNTFCGYPPEIVKKMPKKDLAEEVWRLQAALGEQAEITKYSQQAYERLQTEKVLC 649
             G  GYNTFCGYPPEIVKKMPKKDLAEEVWRLQAALGEQ+EITKYS+Q YERLQ EK+LC
Sbjct: 361  DG-AGYNTFCGYPPEIVKKMPKKDLAEEVWRLQAALGEQSEITKYSKQEYERLQNEKILC 419

Query: 648  RVCFEGEISVVLLPCRHRVLCSICSEKCKKCPICRVSIEERLPVYDV 508
            R+CFEGEISVVLLPCRHR+LCS C EKCKKCPICRV IEERLPVYDV
Sbjct: 420  RICFEGEISVVLLPCRHRILCSTCCEKCKKCPICRVPIEERLPVYDV 466


>ref|XP_002321460.1| predicted protein [Populus trichocarpa] gi|222868456|gb|EEF05587.1|
            predicted protein [Populus trichocarpa]
          Length = 466

 Score =  773 bits (1995), Expect = 0.0
 Identities = 372/467 (79%), Positives = 401/467 (85%)
 Frame = -3

Query: 1908 MSWRRVGKSAQAVAAHGXXXXXXXXLVFKLDRVKFHSWWLVFAPLWLFHAVVARGRFSLP 1729
            M+WRRV KS QA+AAH         LV KLD V  +SWWL+F PLW FH VVARGRFSLP
Sbjct: 1    MNWRRVLKSVQALAAHCLLFSFTLFLVLKLDHVVSYSWWLIFFPLWTFHVVVARGRFSLP 60

Query: 1728 APSIPHDRHWAPCHAIVATPLLVAFELLLCIYLENIYVSGFAAVNLKVVFLPLLAFEIII 1549
            APS+P +RHWAPCHA+VATPLL+AFELLLCIYLE++YV   AAVNLK+VF+PLLAFE+II
Sbjct: 61   APSVPRNRHWAPCHAVVATPLLIAFELLLCIYLESVYVYHIAAVNLKIVFIPLLAFEVII 120

Query: 1548 LIDNFRMCRALMPGDEESMSDEAIWETLPHFWVAISMVFFVAATTFTLLKLSGDVGALGW 1369
            LIDNFRMC+ALMPG+EES+SDEAIWETLPHFWVAISMVFFVAAT FTLLKL GDVGALGW
Sbjct: 121  LIDNFRMCKALMPGEEESISDEAIWETLPHFWVAISMVFFVAATVFTLLKLGGDVGALGW 180

Query: 1368 WDLFINFGIAECFAFLVCTKWSNPVIHRQSYNREASSSSTAIRYLDWNSGLVVSSEEDSD 1189
            WDLFINF IAECFAFLVCTKWSNPVIHR S  REASSS T IRYLDWN GL+VS EE+  
Sbjct: 181  WDLFINFSIAECFAFLVCTKWSNPVIHRNSQTREASSSMT-IRYLDWNGGLMVSPEENQH 239

Query: 1188 QDRLCGLQDIGGHIMKIPLVGFQVLLCMRLEGTPPRARNIXXXXXXXXXXXLQGVGVLFA 1009
            QDR+CGLQDIGGH+MKIPL+GFQVLLCM LEGTP  ARNI           LQG GVLFA
Sbjct: 240  QDRMCGLQDIGGHLMKIPLIGFQVLLCMHLEGTPAGARNIPLLVLFSPLFLLQGAGVLFA 299

Query: 1008 MSRLVEKIVLLLRSGAFTGRYFTISSRARDCFGFLHHGSRLLGWWSIDEGSREEQARIYH 829
             S+L EK+VLLLRS A TGRYFT SSRA DC GFLHHGSRLLGWWSIDEGS+EEQAR+YH
Sbjct: 300  ASKLAEKLVLLLRSEAGTGRYFTFSSRAHDCLGFLHHGSRLLGWWSIDEGSQEEQARLYH 359

Query: 828  SGTTGYNTFCGYPPEIVKKMPKKDLAEEVWRLQAALGEQAEITKYSQQAYERLQTEKVLC 649
             G   YNTFCGYPPEIVKKMPKKDLAEEVWRLQAALGEQ EITKYSQQ +ERLQ EKVLC
Sbjct: 360  MGDASYNTFCGYPPEIVKKMPKKDLAEEVWRLQAALGEQTEITKYSQQEFERLQNEKVLC 419

Query: 648  RVCFEGEISVVLLPCRHRVLCSICSEKCKKCPICRVSIEERLPVYDV 508
            RVCFEGEISVVLLPCRHR+LCS C E+CKKCPICRVS+EERL VYDV
Sbjct: 420  RVCFEGEISVVLLPCRHRILCSTCCERCKKCPICRVSVEERLSVYDV 466


>ref|XP_002317932.1| predicted protein [Populus trichocarpa] gi|222858605|gb|EEE96152.1|
            predicted protein [Populus trichocarpa]
          Length = 467

 Score =  761 bits (1966), Expect = 0.0
 Identities = 366/467 (78%), Positives = 394/467 (84%)
 Frame = -3

Query: 1908 MSWRRVGKSAQAVAAHGXXXXXXXXLVFKLDRVKFHSWWLVFAPLWLFHAVVARGRFSLP 1729
            M WRRV KS QA+AAH         LV KLD V  +SWWL+F PLW FH VVARGRF+LP
Sbjct: 1    MGWRRVLKSLQALAAHSLLFSFTLFLVLKLDHVASYSWWLIFFPLWTFHGVVARGRFALP 60

Query: 1728 APSIPHDRHWAPCHAIVATPLLVAFELLLCIYLENIYVSGFAAVNLKVVFLPLLAFEIII 1549
            APS+PH+RHWAPCHA+VATPLL+AFELLLCIYLE++YV    AVNLK+VF+PLLAFEIII
Sbjct: 61   APSVPHNRHWAPCHAVVATPLLIAFELLLCIYLESVYVYHIPAVNLKIVFIPLLAFEIII 120

Query: 1548 LIDNFRMCRALMPGDEESMSDEAIWETLPHFWVAISMVFFVAATTFTLLKLSGDVGALGW 1369
            LIDNFRMC+ALMPG+EES+SDEAIWETLPHFWVAISMVFFVAAT FTLLKL GDVGALGW
Sbjct: 121  LIDNFRMCKALMPGEEESISDEAIWETLPHFWVAISMVFFVAATVFTLLKLCGDVGALGW 180

Query: 1368 WDLFINFGIAECFAFLVCTKWSNPVIHRQSYNREASSSSTAIRYLDWNSGLVVSSEEDSD 1189
            WDLFINF IAE FAFLVCTKWSNP IHR S  RE SSSST IRYLDWN GL+VS EE+  
Sbjct: 181  WDLFINFSIAEFFAFLVCTKWSNPAIHRNSRTREVSSSSTTIRYLDWNGGLMVSPEENQH 240

Query: 1188 QDRLCGLQDIGGHIMKIPLVGFQVLLCMRLEGTPPRARNIXXXXXXXXXXXLQGVGVLFA 1009
            QDR+CGLQ+IGGHIMKIPL+GFQVLL M LEG P  ARN+           LQG GVLFA
Sbjct: 241  QDRMCGLQEIGGHIMKIPLIGFQVLLFMHLEGRPAGARNLPFLVLFSPLFLLQGAGVLFA 300

Query: 1008 MSRLVEKIVLLLRSGAFTGRYFTISSRARDCFGFLHHGSRLLGWWSIDEGSREEQARIYH 829
             S+L EK++LLLRS A TGRYF  SSRA DC GFLHHGSRLLGWWSIDEGSREEQAR+YH
Sbjct: 301  ASKLAEKLILLLRSEAGTGRYFRFSSRAHDCLGFLHHGSRLLGWWSIDEGSREEQARLYH 360

Query: 828  SGTTGYNTFCGYPPEIVKKMPKKDLAEEVWRLQAALGEQAEITKYSQQAYERLQTEKVLC 649
             G  GYNTFCGYPPEIVKKMPKKDLAEEVWRLQAALGEQ EITKYSQQ +ERL  EKVLC
Sbjct: 361  GGDAGYNTFCGYPPEIVKKMPKKDLAEEVWRLQAALGEQTEITKYSQQEFERLTNEKVLC 420

Query: 648  RVCFEGEISVVLLPCRHRVLCSICSEKCKKCPICRVSIEERLPVYDV 508
            RVCFEGEISVVLLPCRHR+LCS C EKCKKCPICRVS+EE L VYDV
Sbjct: 421  RVCFEGEISVVLLPCRHRILCSTCCEKCKKCPICRVSVEECLSVYDV 467


>ref|XP_004154923.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101215825 [Cucumis
            sativus]
          Length = 467

 Score =  758 bits (1957), Expect = 0.0
 Identities = 361/467 (77%), Positives = 394/467 (84%)
 Frame = -3

Query: 1908 MSWRRVGKSAQAVAAHGXXXXXXXXLVFKLDRVKFHSWWLVFAPLWLFHAVVARGRFSLP 1729
            M+WRRV KS QA+ AHG        LV KLD    HSWW+VF PLW+FH VVARGRFSLP
Sbjct: 1    MTWRRVLKSVQALLAHGSLFCFTLLLVLKLDHFVSHSWWVVFFPLWVFHVVVARGRFSLP 60

Query: 1728 APSIPHDRHWAPCHAIVATPLLVAFELLLCIYLENIYVSGFAAVNLKVVFLPLLAFEIII 1549
            APS+PH+RHWAPCHA+VATPLL+AFELLLC+YLE++ V GF AVNLK+VFLPLLAFEIII
Sbjct: 61   APSLPHNRHWAPCHAVVATPLLIAFELLLCVYLESLSVYGFTAVNLKIVFLPLLAFEIII 120

Query: 1548 LIDNFRMCRALMPGDEESMSDEAIWETLPHFWVAISMVFFVAATTFTLLKLSGDVGALGW 1369
            LIDNFRMCR+LMPGD+ESMSDEAIWETLPHFWVAISMVFFVAAT FTLLKLSG+VGALGW
Sbjct: 121  LIDNFRMCRSLMPGDDESMSDEAIWETLPHFWVAISMVFFVAATVFTLLKLSGNVGALGW 180

Query: 1368 WDLFINFGIAECFAFLVCTKWSNPVIHRQSYNREASSSSTAIRYLDWNSGLVVSSEEDSD 1189
            WDLFINFGIAECFAFLVCTKWSNP IHR    RE  SSS+ +RYLDWNSGL+V  E+D  
Sbjct: 181  WDLFINFGIAECFAFLVCTKWSNPAIHRNIQTRERCSSSSVVRYLDWNSGLIVYPEQDQH 240

Query: 1188 QDRLCGLQDIGGHIMKIPLVGFQVLLCMRLEGTPPRARNIXXXXXXXXXXXLQGVGVLFA 1009
            QDR+CGLQDIGGHIMKIP++ FQ+LLCM LEGTP  A+N+           LQG  V++A
Sbjct: 241  QDRICGLQDIGGHIMKIPIIXFQILLCMYLEGTPAAAKNMPLPILFSPLFMLQGAAVIYA 300

Query: 1008 MSRLVEKIVLLLRSGAFTGRYFTISSRARDCFGFLHHGSRLLGWWSIDEGSREEQARIYH 829
             SRL+EK VLLLR G+ T  YF+ S RA  C  F HHGSRLLGWWSIDE SREEQAR+YH
Sbjct: 301  TSRLLEKAVLLLRGGSGTALYFSFSIRAHACLEFFHHGSRLLGWWSIDESSREEQARLYH 360

Query: 828  SGTTGYNTFCGYPPEIVKKMPKKDLAEEVWRLQAALGEQAEITKYSQQAYERLQTEKVLC 649
             G +GYNTF GYPPE+VKKMPKKDLAEEVWRLQAALGEQ EITKYSQQ YERLQ EKVLC
Sbjct: 361  EGASGYNTFSGYPPEVVKKMPKKDLAEEVWRLQAALGEQTEITKYSQQEYERLQNEKVLC 420

Query: 648  RVCFEGEISVVLLPCRHRVLCSICSEKCKKCPICRVSIEERLPVYDV 508
            RVCFEGEISVVLLPCRHRVLCS CSEKCKKCPICRV IEERLPVYDV
Sbjct: 421  RVCFEGEISVVLLPCRHRVLCSSCSEKCKKCPICRVVIEERLPVYDV 467


>ref|XP_004138227.1| PREDICTED: uncharacterized protein LOC101215825 [Cucumis sativus]
          Length = 474

 Score =  746 bits (1927), Expect = 0.0
 Identities = 355/474 (74%), Positives = 393/474 (82%)
 Frame = -3

Query: 1929 LMLPGKAMSWRRVGKSAQAVAAHGXXXXXXXXLVFKLDRVKFHSWWLVFAPLWLFHAVVA 1750
            +++  + M+WRRV KS QA+ AHG        LV KLD    HSWW+VF PLW+FH VVA
Sbjct: 1    MVVEKRGMTWRRVLKSVQALLAHGSLFCFTLLLVLKLDHFVSHSWWVVFFPLWVFHVVVA 60

Query: 1749 RGRFSLPAPSIPHDRHWAPCHAIVATPLLVAFELLLCIYLENIYVSGFAAVNLKVVFLPL 1570
            RGRFSLPAPS+PH+RHWAPCHA+VATPLL+AFELLLC+YLE++ V GF AVNLK+VFLPL
Sbjct: 61   RGRFSLPAPSLPHNRHWAPCHAVVATPLLIAFELLLCVYLESLSVYGFTAVNLKIVFLPL 120

Query: 1569 LAFEIIILIDNFRMCRALMPGDEESMSDEAIWETLPHFWVAISMVFFVAATTFTLLKLSG 1390
            LAFEIIILIDNFRMCR+LMPGD+ESMSDEAIWETLPHFWVAISMVFFVAAT   +L   G
Sbjct: 121  LAFEIIILIDNFRMCRSLMPGDDESMSDEAIWETLPHFWVAISMVFFVAATVLIMLTFVG 180

Query: 1389 DVGALGWWDLFINFGIAECFAFLVCTKWSNPVIHRQSYNREASSSSTAIRYLDWNSGLVV 1210
            +VGALGWWDLFINFGIAECFAFLVCTKWSNP IHR    RE  SSS+ +RYLDWNSGL+V
Sbjct: 181  NVGALGWWDLFINFGIAECFAFLVCTKWSNPAIHRNIQTRERCSSSSVVRYLDWNSGLIV 240

Query: 1209 SSEEDSDQDRLCGLQDIGGHIMKIPLVGFQVLLCMRLEGTPPRARNIXXXXXXXXXXXLQ 1030
              E+D  QDR+CGLQDIGGHIMKIP++ FQ+LLCM LEGTP  A+N+           LQ
Sbjct: 241  YPEQDQHQDRICGLQDIGGHIMKIPIIIFQILLCMYLEGTPAAAKNMPLPILFSPLFMLQ 300

Query: 1029 GVGVLFAMSRLVEKIVLLLRSGAFTGRYFTISSRARDCFGFLHHGSRLLGWWSIDEGSRE 850
            G  V++A SRL+EK VLLLR G+ T  YF+ S RA  C  F HHGSRLLGWWSIDE SRE
Sbjct: 301  GAAVIYATSRLLEKAVLLLRGGSGTALYFSFSIRAHACLEFFHHGSRLLGWWSIDESSRE 360

Query: 849  EQARIYHSGTTGYNTFCGYPPEIVKKMPKKDLAEEVWRLQAALGEQAEITKYSQQAYERL 670
            EQAR+YH G +GYNTF GYPPE+VKKMPKKDLAEEVWRLQAALGEQ EITKYSQQ YERL
Sbjct: 361  EQARLYHEGASGYNTFSGYPPEVVKKMPKKDLAEEVWRLQAALGEQTEITKYSQQEYERL 420

Query: 669  QTEKVLCRVCFEGEISVVLLPCRHRVLCSICSEKCKKCPICRVSIEERLPVYDV 508
            Q EKVLCRVCFEGEISVVLLPCRHRVLCS CSEKCKKCPICRV IEERLPVYDV
Sbjct: 421  QNEKVLCRVCFEGEISVVLLPCRHRVLCSSCSEKCKKCPICRVVIEERLPVYDV 474


Top