BLASTX nr result

ID: Coptis21_contig00000318 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000318
         (761 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002333629.1| predicted protein [Populus trichocarpa] gi|2...    66   7e-09
ref|XP_002320002.1| predicted protein [Populus trichocarpa] gi|2...    64   5e-08
ref|XP_003598504.1| Disease resistance protein I-2 [Medicago tru...    56   7e-06

>ref|XP_002333629.1| predicted protein [Populus trichocarpa] gi|222837837|gb|EEE76202.1|
           predicted protein [Populus trichocarpa]
          Length = 634

 Score = 66.2 bits (160), Expect = 7e-09
 Identities = 52/167 (31%), Positives = 76/167 (45%), Gaps = 16/167 (9%)
 Frame = +1

Query: 1   EFYGLGSTSTGGEDSVQSVVLFPKLHTLNIEEMKECEEWHLPFRRGVEIFPKLRKLNV-- 174
           EFY +  ++T         +LFP L  L +E M   EEW +P   G ++FP L KL++  
Sbjct: 94  EFYSISGSAT---------ILFPALKELTLEYMDGLEEWMIPGGEGDQVFPFLEKLSIQQ 144

Query: 175 --------TMMKLKSLEELYLDGM-KFRCL--ELFGISSDDDNVTPVAVFPVLKKLTL-- 315
                   T+  L  L+ L + G+   +C+  E + IS      +P  +FP LK+LTL  
Sbjct: 145 CGKLRQLPTLGCLPRLKILKMSGINNVKCIGNEFYSISG-----SPTILFPALKELTLEY 199

Query: 316 -SSLPEWEEQGDEIKLPIRRDEEGGEGFIMPCLRKLQIISCPKLKVV 453
              L EW   G E+              + PCL +L I  C KLK +
Sbjct: 200 MDGLEEWMVPGGEVVA------------VFPCLEELSIQQCGKLKSI 234


>ref|XP_002320002.1| predicted protein [Populus trichocarpa] gi|222860775|gb|EEE98317.1|
           predicted protein [Populus trichocarpa]
          Length = 855

 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 58/166 (34%), Positives = 76/166 (45%), Gaps = 17/166 (10%)
 Frame = +1

Query: 1   EFYGLGSTSTGGEDSVQSVVLFPKLHTLNIEEMKECEEWHLPFRRGVEIFPKLRKLNV-- 174
           EFY  GS S        + VLFP L  L +  M   EEW +P   G  +FP L KL++  
Sbjct: 310 EFYSSGSGS--------ATVLFPALKELTLRYMDGLEEWMVPGGEGDRVFPCLEKLSIEM 361

Query: 175 --------TMMKLKSLEELYLDGM-KFRCL--ELFGISSDDDNVTPVAVFPVLKKLTL-- 315
                   T+  L  L+ LY+  M   +C+  E +  SS  + V    +FP LK+LTL  
Sbjct: 362 CGKLRQLPTLGCLPRLKILYMSRMPNVKCIGKEFYSSSSGSEAV----LFPALKELTLRY 417

Query: 316 -SSLPEWEEQGDEIKLPIRRDEEGGEG-FIMPCLRKLQIISCPKLK 447
              L EW        +P      GGEG  + PCL KL I  C KL+
Sbjct: 418 MDGLEEW-------MVP------GGEGDRVFPCLEKLSIEMCGKLR 450



 Score = 60.1 bits (144), Expect = 5e-07
 Identities = 56/165 (33%), Positives = 76/165 (46%), Gaps = 14/165 (8%)
 Frame = +1

Query: 1   EFYGLGSTSTGGEDSVQSVVLFPKLHTLNIEEMKECEEWHLPFRRGVEIFPKLRKLNVTM 180
           EFY   S+S+G E      VLFP L  L +  M   EEW +P   G  +FP L KL++ M
Sbjct: 394 EFY---SSSSGSE-----AVLFPALKELTLRYMDGLEEWMVPGGEGDRVFPCLEKLSIEM 445

Query: 181 M-------------KLKSLEELYLDGMKFRCLELFGISSDDDNVTPVAVFPVLKKLTLSS 321
                         +LK L+ + +  +K    E +  SS    V    +FP LK L+L S
Sbjct: 446 CGKLRQLPTLGCLPRLKILDMIGMPNVKCIGKEFYSSSSGSAAV----LFPALKGLSLFS 501

Query: 322 LPEWEEQGDEIKLPIRRDEEGGEGF-IMPCLRKLQIISCPKLKVV 453
           +   EE      +P      GGEG  + PCL KL I  C KL+ +
Sbjct: 502 MGGLEEW----MVP------GGEGDQVFPCLEKLSIEWCGKLESI 536


>ref|XP_003598504.1| Disease resistance protein I-2 [Medicago truncatula]
            gi|355487552|gb|AES68755.1| Disease resistance protein
            I-2 [Medicago truncatula]
          Length = 1319

 Score = 56.2 bits (134), Expect = 7e-06
 Identities = 46/139 (33%), Positives = 68/139 (48%), Gaps = 11/139 (7%)
 Frame = +1

Query: 64   FPKLHTLNIEEMKECEEWHLPFRRGVEIFPKLRKL----------NVTMMKLKSLEELYL 213
            F  L TL  + M E E+W L      E FP+L++L          N+ + +L++LEE+ L
Sbjct: 823  FSFLETLEFDTMLEWEDWKLIGGTTAE-FPRLKRLSLRQCPKLKGNLPLGQLQNLEEIIL 881

Query: 214  DGMK-FRCLELFGISSDDDNVTPVAVFPVLKKLTLSSLPEWEEQGDEIKLPIRRDEEGGE 390
            +GMK  + L+     S    +     FP LK L+ +++ EWEE     KL       GG 
Sbjct: 882  EGMKSLKTLDTGFYGSSSSRL--FQPFPFLKTLSFTNMQEWEEW----KL------IGGA 929

Query: 391  GFIMPCLRKLQIISCPKLK 447
                P L +L + +CPKLK
Sbjct: 930  SIEFPSLTRLLLCNCPKLK 948


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