BLASTX nr result

ID: Coptis21_contig00000305 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000305
         (967 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275793.1| PREDICTED: ganglioside-induced differentiati...   372   e-101
ref|XP_002531499.1| conserved hypothetical protein [Ricinus comm...   366   4e-99
ref|XP_002307993.1| predicted protein [Populus trichocarpa] gi|2...   353   3e-95
ref|XP_003625015.1| Ganglioside-induced differentiation-associat...   352   8e-95
gb|ABK94010.1| unknown [Populus trichocarpa]                          352   1e-94

>ref|XP_002275793.1| PREDICTED: ganglioside-induced differentiation-associated-protein 2
           [Vitis vinifera] gi|297739900|emb|CBI30082.3| unnamed
           protein product [Vitis vinifera]
          Length = 247

 Score =  372 bits (954), Expect = e-101
 Identities = 176/220 (80%), Positives = 196/220 (89%), Gaps = 1/220 (0%)
 Frame = -3

Query: 962 LSPSERIQEED-NFHDCQSYLLNNDEDFSDLDLLQAFTVQGLDKSGNRILRIVGKYFPAP 786
           L    +I+E+D N+HDC  YL  +DEDFSDLDLLQ   +QG DKSGNRILRIVGKY PAP
Sbjct: 26  LDAQAQIEEQDENWHDCSQYL--SDEDFSDLDLLQFIRIQGSDKSGNRILRIVGKYLPAP 83

Query: 785 IISAERLKKYVFHKIFSELSEGPFCIVYIHSTVQKEDNSPGMTILRWIYEELPSEFKDKL 606
           ++S ERLKKYVFHKI SEL EGPFCIVY+HSTVQKEDNSPG+TILRWIYEELPS+FKD+L
Sbjct: 84  VVSGERLKKYVFHKIVSELPEGPFCIVYMHSTVQKEDNSPGLTILRWIYEELPSDFKDRL 143

Query: 605 QVVYFVHPGLRSRLLLATLGRFFLSGGVYWKIKYVSRLQYLWEDIKKGEVEIPEFVKNHD 426
           Q VYFVHPGLRSRLL ATLGRFFLSGG+YWKIKYVSRLQYLWED+KKGEVEIPEFV++HD
Sbjct: 144 QTVYFVHPGLRSRLLFATLGRFFLSGGLYWKIKYVSRLQYLWEDVKKGEVEIPEFVQSHD 203

Query: 425 DVLEHRPLTDYGIEPDPLHLGEIPSMGSSYGRYDERWPTR 306
           DVLEHRPLTDYGIEPDPLHL E+PS   S+GRY+ERW +R
Sbjct: 204 DVLEHRPLTDYGIEPDPLHLTEMPSTAYSFGRYEERWTSR 243


>ref|XP_002531499.1| conserved hypothetical protein [Ricinus communis]
           gi|223528886|gb|EEF30886.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 261

 Score =  366 bits (940), Expect = 4e-99
 Identities = 168/216 (77%), Positives = 193/216 (89%)
 Frame = -3

Query: 941 QEEDNFHDCQSYLLNNDEDFSDLDLLQAFTVQGLDKSGNRILRIVGKYFPAPIISAERLK 762
           +E DN+HDC  YLL  DEDFSDLDLLQ F +QG DKSGNRI R++GKYFPA +ISAERLK
Sbjct: 47  EEADNWHDCSQYLLP-DEDFSDLDLLQFFRLQGSDKSGNRIFRVIGKYFPAQVISAERLK 105

Query: 761 KYVFHKIFSELSEGPFCIVYIHSTVQKEDNSPGMTILRWIYEELPSEFKDKLQVVYFVHP 582
           KY+FHK+ SEL EGPFCIVY+HSTVQKEDNSPG+TILRWIYEELP+++K++LQVVYF+HP
Sbjct: 106 KYIFHKMCSELPEGPFCIVYMHSTVQKEDNSPGITILRWIYEELPADYKNRLQVVYFIHP 165

Query: 581 GLRSRLLLATLGRFFLSGGVYWKIKYVSRLQYLWEDIKKGEVEIPEFVKNHDDVLEHRPL 402
           GLRSRL+ ATLGRFFLSGG+YWKIKYVSRLQYLWEDIKKGEVEIPEFV++HDD+LEHRPL
Sbjct: 166 GLRSRLVFATLGRFFLSGGLYWKIKYVSRLQYLWEDIKKGEVEIPEFVQSHDDILEHRPL 225

Query: 401 TDYGIEPDPLHLGEIPSMGSSYGRYDERWPTRSFTT 294
           TDYGIEPDP HL EIP+   S G+Y+ERW  R + T
Sbjct: 226 TDYGIEPDPFHLNEIPTTAYSLGKYEERWAAREYAT 261


>ref|XP_002307993.1| predicted protein [Populus trichocarpa] gi|222853969|gb|EEE91516.1|
           predicted protein [Populus trichocarpa]
          Length = 252

 Score =  353 bits (906), Expect = 3e-95
 Identities = 163/216 (75%), Positives = 190/216 (87%), Gaps = 1/216 (0%)
 Frame = -3

Query: 938 EEDNFHDC-QSYLLNNDEDFSDLDLLQAFTVQGLDKSGNRILRIVGKYFPAPIISAERLK 762
           E +N+HDC Q ++  +DEDFSDLDLLQ FT+QG DKSGNR+ RIVGKYFPA ++S ERLK
Sbjct: 39  EPENWHDCCQDFI--SDEDFSDLDLLQFFTLQGSDKSGNRVFRIVGKYFPAQVVSGERLK 96

Query: 761 KYVFHKIFSELSEGPFCIVYIHSTVQKEDNSPGMTILRWIYEELPSEFKDKLQVVYFVHP 582
           KY+FHKI SEL EGP CIVY+HSTVQKEDNSPG+TILRWIYEELP+  KD+LQ VYF+HP
Sbjct: 97  KYIFHKICSELPEGPLCIVYMHSTVQKEDNSPGVTILRWIYEELPAGIKDRLQTVYFIHP 156

Query: 581 GLRSRLLLATLGRFFLSGGVYWKIKYVSRLQYLWEDIKKGEVEIPEFVKNHDDVLEHRPL 402
           GLRSRL+ ATLGRFFLSGG+YWKIKYVSRLQYLWEDIKKGE+EIPEFV+NHD++LE+RPL
Sbjct: 157 GLRSRLVFATLGRFFLSGGLYWKIKYVSRLQYLWEDIKKGEIEIPEFVQNHDNILENRPL 216

Query: 401 TDYGIEPDPLHLGEIPSMGSSYGRYDERWPTRSFTT 294
           TDYGIEPDP HL E+P    S+GRY+ERW +R F +
Sbjct: 217 TDYGIEPDPFHLSEMPMTAYSFGRYEERWSSREFAS 252


>ref|XP_003625015.1| Ganglioside-induced differentiation-associated protein [Medicago
           truncatula] gi|87162529|gb|ABD28324.1| Cellular
           retinaldehyde-binding/triple function, C-terminal
           [Medicago truncatula] gi|355500030|gb|AES81233.1|
           Ganglioside-induced differentiation-associated protein
           [Medicago truncatula] gi|388519869|gb|AFK47996.1|
           unknown [Medicago truncatula]
          Length = 249

 Score =  352 bits (903), Expect = 8e-95
 Identities = 158/215 (73%), Positives = 192/215 (89%)
 Frame = -3

Query: 950 ERIQEEDNFHDCQSYLLNNDEDFSDLDLLQAFTVQGLDKSGNRILRIVGKYFPAPIISAE 771
           E+ +EE+N+HDC  YL + DEDFSDL+ LQ FT+QG DK+G RILRI+GK++PA ++SAE
Sbjct: 27  EQQEEEENWHDCSQYL-SPDEDFSDLEFLQFFTLQGTDKNGTRILRIIGKHYPATVVSAE 85

Query: 770 RLKKYVFHKIFSELSEGPFCIVYIHSTVQKEDNSPGMTILRWIYEELPSEFKDKLQVVYF 591
           RLK+YVFHK+FSEL +GPFCIVY+HSTV  EDNSPGMTILRWIYE+LP EFKD+LQ +YF
Sbjct: 86  RLKRYVFHKLFSELPDGPFCIVYLHSTVTNEDNSPGMTILRWIYEDLPDEFKDRLQTLYF 145

Query: 590 VHPGLRSRLLLATLGRFFLSGGVYWKIKYVSRLQYLWEDIKKGEVEIPEFVKNHDDVLEH 411
           +HPGLRSRL++ATLGRFFLSGG+YWKIKYVSRLQYLW+DIKKGE+EIPEFV+ HDD+LE+
Sbjct: 146 IHPGLRSRLVMATLGRFFLSGGLYWKIKYVSRLQYLWDDIKKGEIEIPEFVQKHDDILEN 205

Query: 410 RPLTDYGIEPDPLHLGEIPSMGSSYGRYDERWPTR 306
           RPLTDYGIEPDP HL  +PS+  S+G+Y+ERW  R
Sbjct: 206 RPLTDYGIEPDPFHLTGMPSVAYSFGKYEERWAGR 240


>gb|ABK94010.1| unknown [Populus trichocarpa]
          Length = 252

 Score =  352 bits (902), Expect = 1e-94
 Identities = 163/216 (75%), Positives = 189/216 (87%), Gaps = 1/216 (0%)
 Frame = -3

Query: 938 EEDNFHDC-QSYLLNNDEDFSDLDLLQAFTVQGLDKSGNRILRIVGKYFPAPIISAERLK 762
           E +N+HDC Q ++  +DEDFSDLDLLQ FT+QG DKSGNR+ RIVGKYFPA ++S ERLK
Sbjct: 39  EPENWHDCCQDFI--SDEDFSDLDLLQFFTLQGSDKSGNRVFRIVGKYFPAQVVSGERLK 96

Query: 761 KYVFHKIFSELSEGPFCIVYIHSTVQKEDNSPGMTILRWIYEELPSEFKDKLQVVYFVHP 582
           KY+FHKI SEL EGP CIVY HSTVQKEDNSPG+TILRWIYEELP+  KD+LQ VYF+HP
Sbjct: 97  KYIFHKICSELPEGPLCIVYKHSTVQKEDNSPGVTILRWIYEELPAGIKDRLQTVYFIHP 156

Query: 581 GLRSRLLLATLGRFFLSGGVYWKIKYVSRLQYLWEDIKKGEVEIPEFVKNHDDVLEHRPL 402
           GLRSRL+ ATLGRFFLSGG+YWKIKYVSRLQYLWEDIKKGE+EIPEFV+NHD++LE+RPL
Sbjct: 157 GLRSRLVFATLGRFFLSGGLYWKIKYVSRLQYLWEDIKKGEIEIPEFVQNHDNILENRPL 216

Query: 401 TDYGIEPDPLHLGEIPSMGSSYGRYDERWPTRSFTT 294
           TDYGIEPDP HL E+P    S+GRY+ERW +R F +
Sbjct: 217 TDYGIEPDPFHLSEMPMTAYSFGRYEERWSSREFAS 252


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