BLASTX nr result

ID: Coptis21_contig00000304 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000304
         (244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002884783.1| hypothetical protein ARALYDRAFT_897197 [Arab...   111   7e-23
ref|XP_002531499.1| conserved hypothetical protein [Ricinus comm...   109   2e-22
ref|XP_002275793.1| PREDICTED: ganglioside-induced differentiati...   109   2e-22
ref|XP_003625015.1| Ganglioside-induced differentiation-associat...   107   8e-22
ref|NP_001242373.1| uncharacterized protein LOC100810365 [Glycin...   105   4e-21

>ref|XP_002884783.1| hypothetical protein ARALYDRAFT_897197 [Arabidopsis lyrata subsp.
           lyrata] gi|297330623|gb|EFH61042.1| hypothetical protein
           ARALYDRAFT_897197 [Arabidopsis lyrata subsp. lyrata]
          Length = 237

 Score =  111 bits (277), Expect = 7e-23
 Identities = 52/79 (65%), Positives = 65/79 (82%)
 Frame = +3

Query: 6   LSPSERIQEEDNFHDCQSYLLNNDEDFSDLDLLQAFTVQGLDKSGNRILRIVGKYFPAPI 185
           L+ S+ + E++N+HDC  YL   DEDFSDLDLLQ FT+QGLDKSGNRI R+VGKYFPA +
Sbjct: 22  LTRSDEVDEQENWHDCPQYL--EDEDFSDLDLLQFFTLQGLDKSGNRIFRVVGKYFPARV 79

Query: 186 ISAERLKKYVFHKIFSELS 242
           +SAERLKKY+F KI ++ S
Sbjct: 80  VSAERLKKYIFQKISNQCS 98


>ref|XP_002531499.1| conserved hypothetical protein [Ricinus communis]
           gi|223528886|gb|EEF30886.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 261

 Score =  109 bits (273), Expect = 2e-22
 Identities = 52/71 (73%), Positives = 60/71 (84%)
 Frame = +3

Query: 27  QEEDNFHDCQSYLLNNDEDFSDLDLLQAFTVQGLDKSGNRILRIVGKYFPAPIISAERLK 206
           +E DN+HDC  YLL  DEDFSDLDLLQ F +QG DKSGNRI R++GKYFPA +ISAERLK
Sbjct: 47  EEADNWHDCSQYLLP-DEDFSDLDLLQFFRLQGSDKSGNRIFRVIGKYFPAQVISAERLK 105

Query: 207 KYVFHKIFSEL 239
           KY+FHK+ SEL
Sbjct: 106 KYIFHKMCSEL 116


>ref|XP_002275793.1| PREDICTED: ganglioside-induced differentiation-associated-protein 2
           [Vitis vinifera] gi|297739900|emb|CBI30082.3| unnamed
           protein product [Vitis vinifera]
          Length = 247

 Score =  109 bits (273), Expect = 2e-22
 Identities = 55/79 (69%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
 Frame = +3

Query: 6   LSPSERIQEED-NFHDCQSYLLNNDEDFSDLDLLQAFTVQGLDKSGNRILRIVGKYFPAP 182
           L    +I+E+D N+HDC  YL  +DEDFSDLDLLQ   +QG DKSGNRILRIVGKY PAP
Sbjct: 26  LDAQAQIEEQDENWHDCSQYL--SDEDFSDLDLLQFIRIQGSDKSGNRILRIVGKYLPAP 83

Query: 183 IISAERLKKYVFHKIFSEL 239
           ++S ERLKKYVFHKI SEL
Sbjct: 84  VVSGERLKKYVFHKIVSEL 102


>ref|XP_003625015.1| Ganglioside-induced differentiation-associated protein [Medicago
           truncatula] gi|87162529|gb|ABD28324.1| Cellular
           retinaldehyde-binding/triple function, C-terminal
           [Medicago truncatula] gi|355500030|gb|AES81233.1|
           Ganglioside-induced differentiation-associated protein
           [Medicago truncatula] gi|388519869|gb|AFK47996.1|
           unknown [Medicago truncatula]
          Length = 249

 Score =  107 bits (268), Expect = 8e-22
 Identities = 49/74 (66%), Positives = 64/74 (86%)
 Frame = +3

Query: 18  ERIQEEDNFHDCQSYLLNNDEDFSDLDLLQAFTVQGLDKSGNRILRIVGKYFPAPIISAE 197
           E+ +EE+N+HDC  YL + DEDFSDL+ LQ FT+QG DK+G RILRI+GK++PA ++SAE
Sbjct: 27  EQQEEEENWHDCSQYL-SPDEDFSDLEFLQFFTLQGTDKNGTRILRIIGKHYPATVVSAE 85

Query: 198 RLKKYVFHKIFSEL 239
           RLK+YVFHK+FSEL
Sbjct: 86  RLKRYVFHKLFSEL 99


>ref|NP_001242373.1| uncharacterized protein LOC100810365 [Glycine max]
           gi|255634536|gb|ACU17631.1| unknown [Glycine max]
          Length = 246

 Score =  105 bits (262), Expect = 4e-21
 Identities = 52/78 (66%), Positives = 62/78 (79%)
 Frame = +3

Query: 6   LSPSERIQEEDNFHDCQSYLLNNDEDFSDLDLLQAFTVQGLDKSGNRILRIVGKYFPAPI 185
           L   ++ QEE+N+HDC  YL + DEDFSDLD LQ   +QG DK+ NRILRIVGKYFPA +
Sbjct: 25  LEHDQQQQEEENWHDCSQYL-SPDEDFSDLDQLQFLRLQGSDKNSNRILRIVGKYFPATV 83

Query: 186 ISAERLKKYVFHKIFSEL 239
           +SAERLK+YVFHKI SEL
Sbjct: 84  VSAERLKRYVFHKICSEL 101


Top