BLASTX nr result

ID: Coptis21_contig00000288 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000288
         (2160 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270644.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   993   0.0  
ref|XP_003631587.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   992   0.0  
ref|XP_004145628.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   975   0.0  
ref|XP_004156907.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP...   973   0.0  
ref|XP_003551050.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   972   0.0  

>ref|XP_002270644.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like [Vitis
            vinifera]
          Length = 709

 Score =  993 bits (2566), Expect = 0.0
 Identities = 497/552 (90%), Positives = 517/552 (93%)
 Frame = -3

Query: 2158 EKFRFSFDWENTEDTSRDMNILYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREE 1979
            EKFRFSFDWENTEDTSRDMN LYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREE
Sbjct: 158  EKFRFSFDWENTEDTSRDMNSLYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREE 217

Query: 1978 IRKKDGVEERPXXXXXXXXXXXXXEVYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNI 1799
            IRKK+GVEERP             E+YDTFDMRVDRHW+EKKLEEMTERDWRIFREDFN+
Sbjct: 218  IRKKEGVEERPEEAAAQRQKEQAAELYDTFDMRVDRHWTEKKLEEMTERDWRIFREDFNV 277

Query: 1798 SYKGSRIPRPMRSWVESRLTTELLKAVDKAGYKTPSPIQMAAIPLGLQQRDVIGIAETGS 1619
            SYKGS+IPRPMRSWVES+L+ ELLKAV++AGYKTPSPIQMAAIPLGLQQRDVIGIAETGS
Sbjct: 278  SYKGSKIPRPMRSWVESKLSPELLKAVERAGYKTPSPIQMAAIPLGLQQRDVIGIAETGS 337

Query: 1618 GKTAAFVLPMLTYISRLPPMSEENEAEGPYAVVMAPTRELAQQIEDETVKFAHYLGIKVV 1439
            GKTAAFVLPMLTYISRLPP+SEENEAEGPYAVVMAPTRELAQQIEDETVKFAHYLGIKVV
Sbjct: 338  GKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEDETVKFAHYLGIKVV 397

Query: 1438 SIVGGQSIEEQGFKIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFE 1259
            SIVGGQSIEEQGF+IRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFE
Sbjct: 398  SIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFE 457

Query: 1258 PQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTI 1079
            PQVVGVLDAMPSSNLKPENEDEELDEK+IYRTTYMFSATMPPAVERLARKYLRNPVVVTI
Sbjct: 458  PQVVGVLDAMPSSNLKPENEDEELDEKKIYRTTYMFSATMPPAVERLARKYLRNPVVVTI 517

Query: 1078 GTAGKATDLITQHVIMIKDSDKWPRLQKLLNDLGDKTAIVFINTKKSADYLSKNLDKAGY 899
            GTAGKATDLITQHVIM+K S+K P+LQKLL++LGDKTAIVFINTKKS D L+K LDKAGY
Sbjct: 518  GTAGKATDLITQHVIMVKGSEKMPKLQKLLDELGDKTAIVFINTKKSTDTLAKGLDKAGY 577

Query: 898  RVTTLHGGKSQEQREISLDGFRNKRFNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYT 719
            RVTTLHGGKSQEQREISL+GFR KR+NVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYT
Sbjct: 578  RVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYT 637

Query: 718  HRIXXXXXXXXXXXXXTFLTLHDSDVFYDLKQMLIQSNSPVAPELARHEASKFKPGSIPD 539
            HRI             TFLTLHDSDVFYDLKQMLIQSNSPV PELARHEASKFKPGSIPD
Sbjct: 638  HRIGRTGRAGKTGVATTFLTLHDSDVFYDLKQMLIQSNSPVPPELARHEASKFKPGSIPD 697

Query: 538  RPPRRNDTVFAH 503
            RPPRRNDTVFAH
Sbjct: 698  RPPRRNDTVFAH 709


>ref|XP_003631587.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like [Vitis
            vinifera]
          Length = 712

 Score =  992 bits (2565), Expect = 0.0
 Identities = 498/552 (90%), Positives = 519/552 (94%)
 Frame = -3

Query: 2158 EKFRFSFDWENTEDTSRDMNILYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREE 1979
            EKFRFSFDWENTEDTSRDMN LYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREE
Sbjct: 161  EKFRFSFDWENTEDTSRDMNSLYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREE 220

Query: 1978 IRKKDGVEERPXXXXXXXXXXXXXEVYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNI 1799
            IRKK+GVEERP             E+YDTFDMRVDRHW+EKKLEEMTERDWRIFREDFNI
Sbjct: 221  IRKKEGVEERPEEAAAQRQKEQAAELYDTFDMRVDRHWTEKKLEEMTERDWRIFREDFNI 280

Query: 1798 SYKGSRIPRPMRSWVESRLTTELLKAVDKAGYKTPSPIQMAAIPLGLQQRDVIGIAETGS 1619
            SYKGS+IPRPMRSWVES+L+TELLKAV++AGYKTPSPIQMAAIPLGLQQRDVIGIAETGS
Sbjct: 281  SYKGSKIPRPMRSWVESKLSTELLKAVERAGYKTPSPIQMAAIPLGLQQRDVIGIAETGS 340

Query: 1618 GKTAAFVLPMLTYISRLPPMSEENEAEGPYAVVMAPTRELAQQIEDETVKFAHYLGIKVV 1439
            GKTAAFVLPMLTYISRLPPMSEENEAEGPYAVVMAPTRELAQQIEDETVKFAHYLGIKVV
Sbjct: 341  GKTAAFVLPMLTYISRLPPMSEENEAEGPYAVVMAPTRELAQQIEDETVKFAHYLGIKVV 400

Query: 1438 SIVGGQSIEEQGFKIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFE 1259
            SIVGGQSIEEQGF+IRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFE
Sbjct: 401  SIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFE 460

Query: 1258 PQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTI 1079
            PQVVGVLDAMPSSNLKPENEDEELDEK+IYRTTYMFSATMPPAVERLARKYLRNPVVVTI
Sbjct: 461  PQVVGVLDAMPSSNLKPENEDEELDEKKIYRTTYMFSATMPPAVERLARKYLRNPVVVTI 520

Query: 1078 GTAGKATDLITQHVIMIKDSDKWPRLQKLLNDLGDKTAIVFINTKKSADYLSKNLDKAGY 899
            GTAGKATDLITQHVIM+K+S+K  +LQKLL++LGDKTAIVFINTKKSAD L+K LDKAGY
Sbjct: 521  GTAGKATDLITQHVIMMKESEKMFKLQKLLDELGDKTAIVFINTKKSADNLAKGLDKAGY 580

Query: 898  RVTTLHGGKSQEQREISLDGFRNKRFNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYT 719
            RVTTLHGGKSQEQREISL+GFR KR+NVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYT
Sbjct: 581  RVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYT 640

Query: 718  HRIXXXXXXXXXXXXXTFLTLHDSDVFYDLKQMLIQSNSPVAPELARHEASKFKPGSIPD 539
            HRI             TFLTLHDSDVFYDLKQMLIQ+NSPV PELARHEASKFKPG+IPD
Sbjct: 641  HRIGRTGRAGKTGVATTFLTLHDSDVFYDLKQMLIQNNSPVPPELARHEASKFKPGAIPD 700

Query: 538  RPPRRNDTVFAH 503
            RPPRRNDTVFAH
Sbjct: 701  RPPRRNDTVFAH 712


>ref|XP_004145628.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like [Cucumis
            sativus]
          Length = 715

 Score =  975 bits (2521), Expect = 0.0
 Identities = 484/552 (87%), Positives = 517/552 (93%)
 Frame = -3

Query: 2158 EKFRFSFDWENTEDTSRDMNILYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREE 1979
            EKFRFSFDWENTEDTSRDMN+LYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREE
Sbjct: 164  EKFRFSFDWENTEDTSRDMNLLYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREE 223

Query: 1978 IRKKDGVEERPXXXXXXXXXXXXXEVYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNI 1799
            IRKKDGVEE+P             ++YD+FDMRVDRHWSEKKLEEMTERDWRIFREDFNI
Sbjct: 224  IRKKDGVEEKPEEAAAQKLKEKAADLYDSFDMRVDRHWSEKKLEEMTERDWRIFREDFNI 283

Query: 1798 SYKGSRIPRPMRSWVESRLTTELLKAVDKAGYKTPSPIQMAAIPLGLQQRDVIGIAETGS 1619
            SYKGS+IPRPMRSW ES+LTTELLKAV++AGYK+PSPIQMAAIPLGLQQRDVIGIAETGS
Sbjct: 284  SYKGSKIPRPMRSWTESKLTTELLKAVERAGYKSPSPIQMAAIPLGLQQRDVIGIAETGS 343

Query: 1618 GKTAAFVLPMLTYISRLPPMSEENEAEGPYAVVMAPTRELAQQIEDETVKFAHYLGIKVV 1439
            GKTAAFVLPML YI+RLPP++EENEAEGPYAVVMAPTRELAQQIEDETVKF+HYLGIKVV
Sbjct: 344  GKTAAFVLPMLAYITRLPPINEENEAEGPYAVVMAPTRELAQQIEDETVKFSHYLGIKVV 403

Query: 1438 SIVGGQSIEEQGFKIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFE 1259
            SIVGGQSIEEQGFKIRQGCEVVIATPGRL+DCLERRYAVLNQCNYVVLDEADRMIDMGFE
Sbjct: 404  SIVGGQSIEEQGFKIRQGCEVVIATPGRLLDCLERRYAVLNQCNYVVLDEADRMIDMGFE 463

Query: 1258 PQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTI 1079
            PQV+GVLDAMPSSNLKPENEDEELDEK+IYRTTYMFSATMPPAVERLARKYLRNPVVVTI
Sbjct: 464  PQVMGVLDAMPSSNLKPENEDEELDEKKIYRTTYMFSATMPPAVERLARKYLRNPVVVTI 523

Query: 1078 GTAGKATDLITQHVIMIKDSDKWPRLQKLLNDLGDKTAIVFINTKKSADYLSKNLDKAGY 899
            GTAGKATDLI+QHVIM+K+S+K+ RLQ LL++LGDKTAIVF+NTKK+AD ++KNLDKAGY
Sbjct: 524  GTAGKATDLISQHVIMMKESEKFYRLQNLLDNLGDKTAIVFVNTKKNADTVAKNLDKAGY 583

Query: 898  RVTTLHGGKSQEQREISLDGFRNKRFNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYT 719
            RVTTLHGGKSQEQREISL+GFR KR+NVLVATDVAGRGIDIPDVAHVINYDMP NIEMYT
Sbjct: 584  RVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPSNIEMYT 643

Query: 718  HRIXXXXXXXXXXXXXTFLTLHDSDVFYDLKQMLIQSNSPVAPELARHEASKFKPGSIPD 539
            HRI             TFLTL DS+VFYDLKQMLIQSNSPV PELARHEASKFKPGSIPD
Sbjct: 644  HRIGRTGRAGKTGVATTFLTLQDSEVFYDLKQMLIQSNSPVPPELARHEASKFKPGSIPD 703

Query: 538  RPPRRNDTVFAH 503
            RPPRRN+T+FAH
Sbjct: 704  RPPRRNETLFAH 715


>ref|XP_004156907.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
            21-like [Cucumis sativus]
          Length = 715

 Score =  973 bits (2516), Expect = 0.0
 Identities = 483/552 (87%), Positives = 516/552 (93%)
 Frame = -3

Query: 2158 EKFRFSFDWENTEDTSRDMNILYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREE 1979
            EKFRFSFDWENTEDTSRDMN+LYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREE
Sbjct: 164  EKFRFSFDWENTEDTSRDMNLLYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREE 223

Query: 1978 IRKKDGVEERPXXXXXXXXXXXXXEVYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNI 1799
            IRKKDGVEE+P             ++YD+FDMRVDRHWSEKKLEEMTERDWRIFREDFNI
Sbjct: 224  IRKKDGVEEKPEEAAAQKLKEKAADLYDSFDMRVDRHWSEKKLEEMTERDWRIFREDFNI 283

Query: 1798 SYKGSRIPRPMRSWVESRLTTELLKAVDKAGYKTPSPIQMAAIPLGLQQRDVIGIAETGS 1619
            SYKGS+IPRPMRSW ES+LTTELLKAV++AGYK+PSPIQMAAIPLGLQQRDVIGIAETGS
Sbjct: 284  SYKGSKIPRPMRSWTESKLTTELLKAVERAGYKSPSPIQMAAIPLGLQQRDVIGIAETGS 343

Query: 1618 GKTAAFVLPMLTYISRLPPMSEENEAEGPYAVVMAPTRELAQQIEDETVKFAHYLGIKVV 1439
            GKTAAFVLPML YI+RLPP++EENEAEGPYAVVMAPTRELAQQIEDETVKF+HYLGIKVV
Sbjct: 344  GKTAAFVLPMLAYITRLPPINEENEAEGPYAVVMAPTRELAQQIEDETVKFSHYLGIKVV 403

Query: 1438 SIVGGQSIEEQGFKIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFE 1259
            SIVGGQSIEEQGFKIRQGCEVVIATPGRL+DCLERRYAVLNQCNYVVLDEADRMIDMGFE
Sbjct: 404  SIVGGQSIEEQGFKIRQGCEVVIATPGRLLDCLERRYAVLNQCNYVVLDEADRMIDMGFE 463

Query: 1258 PQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTI 1079
            PQV+GVLDAMPSSNLKPENEDEELDEK+ YRTTYMFSATMPPAVERLARKYLRNPVVVTI
Sbjct: 464  PQVMGVLDAMPSSNLKPENEDEELDEKKXYRTTYMFSATMPPAVERLARKYLRNPVVVTI 523

Query: 1078 GTAGKATDLITQHVIMIKDSDKWPRLQKLLNDLGDKTAIVFINTKKSADYLSKNLDKAGY 899
            GTAGKATDLI+QHVIM+K+S+K+ RLQ LL++LGDKTAIVF+NTKK+AD ++KNLDKAGY
Sbjct: 524  GTAGKATDLISQHVIMMKESEKFYRLQNLLDNLGDKTAIVFVNTKKNADTVAKNLDKAGY 583

Query: 898  RVTTLHGGKSQEQREISLDGFRNKRFNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYT 719
            RVTTLHGGKSQEQREISL+GFR KR+NVLVATDVAGRGIDIPDVAHVINYDMP NIEMYT
Sbjct: 584  RVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPSNIEMYT 643

Query: 718  HRIXXXXXXXXXXXXXTFLTLHDSDVFYDLKQMLIQSNSPVAPELARHEASKFKPGSIPD 539
            HRI             TFLTL DS+VFYDLKQMLIQSNSPV PELARHEASKFKPGSIPD
Sbjct: 644  HRIGRTGRAGKTGVATTFLTLQDSEVFYDLKQMLIQSNSPVPPELARHEASKFKPGSIPD 703

Query: 538  RPPRRNDTVFAH 503
            RPPRRN+T+FAH
Sbjct: 704  RPPRRNETLFAH 715


>ref|XP_003551050.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like isoform 1
            [Glycine max] gi|356565649|ref|XP_003551051.1| PREDICTED:
            DEAD-box ATP-dependent RNA helicase 21-like isoform 2
            [Glycine max]
          Length = 706

 Score =  972 bits (2513), Expect = 0.0
 Identities = 481/552 (87%), Positives = 516/552 (93%)
 Frame = -3

Query: 2158 EKFRFSFDWENTEDTSRDMNILYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREE 1979
            EKFRFSFDWENTEDTSRDMN LYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEK+MR++
Sbjct: 155  EKFRFSFDWENTEDTSRDMNSLYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKDMRDQ 214

Query: 1978 IRKKDGVEERPXXXXXXXXXXXXXEVYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNI 1799
            IRKKDG+EERP             ++YDTFDMRVDRHWSEKKLEEMTERDWRIFRED+NI
Sbjct: 215  IRKKDGLEERPEEADAQRRKEAAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDYNI 274

Query: 1798 SYKGSRIPRPMRSWVESRLTTELLKAVDKAGYKTPSPIQMAAIPLGLQQRDVIGIAETGS 1619
            SYKGS+IPRPMRSW ES+LT ELLKAV+KAGYKTPSPIQMAAIPLGLQQRDVIGIAETGS
Sbjct: 275  SYKGSKIPRPMRSWNESKLTNELLKAVEKAGYKTPSPIQMAAIPLGLQQRDVIGIAETGS 334

Query: 1618 GKTAAFVLPMLTYISRLPPMSEENEAEGPYAVVMAPTRELAQQIEDETVKFAHYLGIKVV 1439
            GKTAAFVLPML+YI+RLPP+SE+NEAEGPYAVVMAPTRELAQQIEDETVKFA YLGIKVV
Sbjct: 335  GKTAAFVLPMLSYITRLPPISEDNEAEGPYAVVMAPTRELAQQIEDETVKFAQYLGIKVV 394

Query: 1438 SIVGGQSIEEQGFKIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFE 1259
            SIVGGQSIEEQGFKIRQGCE+VIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFE
Sbjct: 395  SIVGGQSIEEQGFKIRQGCEIVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFE 454

Query: 1258 PQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTI 1079
            PQV+GVLDAMPSSNLKPENEDEELDEK+IYRTTYMFSATMPPAVERLARKYLRNPVVVTI
Sbjct: 455  PQVMGVLDAMPSSNLKPENEDEELDEKKIYRTTYMFSATMPPAVERLARKYLRNPVVVTI 514

Query: 1078 GTAGKATDLITQHVIMIKDSDKWPRLQKLLNDLGDKTAIVFINTKKSADYLSKNLDKAGY 899
            GTAGKATDLI+QHVIM+K+++K+ +L +LL++L DKTAIVF+NTKK+AD+++KNLDK GY
Sbjct: 515  GTAGKATDLISQHVIMMKEAEKFSKLHRLLDELNDKTAIVFVNTKKNADHVAKNLDKDGY 574

Query: 898  RVTTLHGGKSQEQREISLDGFRNKRFNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYT 719
            RVTTLHGGKSQEQREISL+GFR KR+NVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYT
Sbjct: 575  RVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYT 634

Query: 718  HRIXXXXXXXXXXXXXTFLTLHDSDVFYDLKQMLIQSNSPVAPELARHEASKFKPGSIPD 539
            HRI             TFLTLHDSDVFYDLKQMLIQSNSPV PELARHEASKFKPG+IPD
Sbjct: 635  HRIGRTGRAGKTGVATTFLTLHDSDVFYDLKQMLIQSNSPVPPELARHEASKFKPGTIPD 694

Query: 538  RPPRRNDTVFAH 503
            RPPRRNDTVFAH
Sbjct: 695  RPPRRNDTVFAH 706


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