BLASTX nr result
ID: Coptis21_contig00000284
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00000284
(1040 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFK49379.1| unknown [Medicago truncatula] 198 2e-48
gb|AFK38569.1| unknown [Medicago truncatula] 198 2e-48
ref|XP_003608715.1| CWC15-like protein [Medicago truncatula] gi|... 198 2e-48
ref|NP_001149090.1| LOC100282711 [Zea mays] gi|195613170|gb|ACG2... 194 2e-47
gb|ACJ85892.1| unknown [Medicago truncatula] 181 2e-43
>gb|AFK49379.1| unknown [Medicago truncatula]
Length = 227
Score = 198 bits (504), Expect = 2e-48
Identities = 114/228 (50%), Positives = 124/228 (54%), Gaps = 2/228 (0%)
Frame = -1
Query: 956 MTTAARPTWAPAKGGNEQGGTRIFGPSQKFSSRDIASHTTLKPRKEGQDTQDEVQKRN-- 783
MTTAARPTWAPAKGGNEQGGTRIFGPSQK+SSRDIASHTTLKPRK+GQDTQDE+++RN
Sbjct: 1 MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKDGQDTQDELKRRNLR 60
Query: 782 XXXXXXXXXXXXXXXXXXXXXXXXXXXSHLLLEGAKRDTEDRIFPRPXXXXXXXXXXXXX 603
HL LEG KRD ED I PR
Sbjct: 61 DELDERERRHFSSKNKSYNDDRDHGRSGHLFLEGTKRDIEDNIIPRSVDADDSDVEVNGD 120
Query: 602 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVRGNPLLNNNT 423
L+RGNPL+NN T
Sbjct: 121 DESDDDDDEDDTEALLAELEQIKKERAQEKLRKEQQQQEEDLKVKEAELMRGNPLINNPT 180
Query: 422 SAHIVKKRWDEDVVFKNQTRGETKATKRFINDTIRSDFHRKFLHKYMK 279
S VK+RWD+DVVFKNQ RGETK KRFINDTIR+DFHRKFLHKYMK
Sbjct: 181 S-FSVKRRWDDDVVFKNQARGETKLAKRFINDTIRNDFHRKFLHKYMK 227
>gb|AFK38569.1| unknown [Medicago truncatula]
Length = 227
Score = 198 bits (504), Expect = 2e-48
Identities = 114/228 (50%), Positives = 124/228 (54%), Gaps = 2/228 (0%)
Frame = -1
Query: 956 MTTAARPTWAPAKGGNEQGGTRIFGPSQKFSSRDIASHTTLKPRKEGQDTQDEVQKRN-- 783
MTTAARPTWAPAKGGNEQGGTRIFGPSQK+SSRDIASHTTLKPRK+GQDTQDE+++RN
Sbjct: 1 MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKDGQDTQDELKRRNLR 60
Query: 782 XXXXXXXXXXXXXXXXXXXXXXXXXXXSHLLLEGAKRDTEDRIFPRPXXXXXXXXXXXXX 603
HL LEG KRD ED I PR
Sbjct: 61 DKLDERERRHFPSKNKSYNDDRDHGRSGHLFLEGTKRDIEDNIIPRSVDADDSDVEVNSD 120
Query: 602 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVRGNPLLNNNT 423
L+RGNPL+NN T
Sbjct: 121 DESDDDDDEDDTEALLAELEQIKKERAQEKLRKEQQQQEEDLKVKEAELMRGNPLINNPT 180
Query: 422 SAHIVKKRWDEDVVFKNQTRGETKATKRFINDTIRSDFHRKFLHKYMK 279
S VK+RWD+DVVFKNQ RGETK KRFINDTIR+DFHRKFLHKYMK
Sbjct: 181 S-FSVKRRWDDDVVFKNQARGETKLAKRFINDTIRNDFHRKFLHKYMK 227
>ref|XP_003608715.1| CWC15-like protein [Medicago truncatula]
gi|355509770|gb|AES90912.1| CWC15-like protein [Medicago
truncatula] gi|388502986|gb|AFK39559.1| unknown
[Medicago truncatula]
Length = 227
Score = 198 bits (504), Expect = 2e-48
Identities = 114/228 (50%), Positives = 124/228 (54%), Gaps = 2/228 (0%)
Frame = -1
Query: 956 MTTAARPTWAPAKGGNEQGGTRIFGPSQKFSSRDIASHTTLKPRKEGQDTQDEVQKRN-- 783
MTTAARPTWAPAKGGNEQGGTRIFGPSQK+SSRDIASHTTLKPRK+GQDTQDE+++RN
Sbjct: 1 MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKDGQDTQDELKRRNLR 60
Query: 782 XXXXXXXXXXXXXXXXXXXXXXXXXXXSHLLLEGAKRDTEDRIFPRPXXXXXXXXXXXXX 603
HL LEG KRD ED I PR
Sbjct: 61 DELDERERRHFSSKNKSYNDDRDHGRSGHLFLEGTKRDIEDNIIPRSVDADDSDVEVNSD 120
Query: 602 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVRGNPLLNNNT 423
L+RGNPL+NN T
Sbjct: 121 DESDDDDDEDDTEALLAELEQIKKERAQEKLRKEQQQQEEDLKVKEAELMRGNPLINNPT 180
Query: 422 SAHIVKKRWDEDVVFKNQTRGETKATKRFINDTIRSDFHRKFLHKYMK 279
S VK+RWD+DVVFKNQ RGETK KRFINDTIR+DFHRKFLHKYMK
Sbjct: 181 S-FSVKRRWDDDVVFKNQARGETKLAKRFINDTIRNDFHRKFLHKYMK 227
>ref|NP_001149090.1| LOC100282711 [Zea mays] gi|195613170|gb|ACG28415.1|
pre-mRNA-splicing factor cwc15 [Zea mays]
gi|195624656|gb|ACG34158.1| pre-mRNA-splicing factor
cwc15 [Zea mays] gi|223973401|gb|ACN30888.1| unknown
[Zea mays] gi|223973659|gb|ACN31017.1| unknown [Zea
mays] gi|414875696|tpg|DAA52827.1| TPA:
pre-mRNA-splicing factor cwc15 [Zea mays]
Length = 230
Score = 194 bits (494), Expect = 2e-47
Identities = 111/230 (48%), Positives = 126/230 (54%), Gaps = 4/230 (1%)
Frame = -1
Query: 956 MTTAARPTWAPAKGGNEQGGTRIFGPSQKFSSRDIASHTTLKPRKEGQDTQDEVQKRNXX 777
MTTAARPTWAPAKGGNEQGGTRIFGPSQKFSSRD+A+HT+LKPRK+GQ TQ+E+QKRN
Sbjct: 1 MTTAARPTWAPAKGGNEQGGTRIFGPSQKFSSRDLAAHTSLKPRKDGQQTQEELQKRNLR 60
Query: 776 XXXXXXXXXXXXXXXXXXXXXXXXXS---HLLLEGAKRDTEDRIFPRPXXXXXXXXXXXX 606
HLLLEG+KR+TED+I PR
Sbjct: 61 EELEERERKHYSSKDKSYAEERDRRKSSSHLLLEGSKRETEDKIVPREIDADDSDVEPKS 120
Query: 605 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVRGNPLLN-N 429
L+RGNPL+N N
Sbjct: 121 DDESDEDDDDDDTEALMAELERIKKERAEEKLRKERQQAEEEAKMKEAELMRGNPLININ 180
Query: 428 NTSAHIVKKRWDEDVVFKNQTRGETKATKRFINDTIRSDFHRKFLHKYMK 279
N + VK+RWD+DVVFKNQ RGETK KRFINDTIRSDFHRKFL +YMK
Sbjct: 181 NAGSFSVKRRWDDDVVFKNQARGETKTPKRFINDTIRSDFHRKFLQRYMK 230
>gb|ACJ85892.1| unknown [Medicago truncatula]
Length = 250
Score = 181 bits (460), Expect = 2e-43
Identities = 106/221 (47%), Positives = 117/221 (52%), Gaps = 2/221 (0%)
Frame = -1
Query: 956 MTTAARPTWAPAKGGNEQGGTRIFGPSQKFSSRDIASHTTLKPRKEGQDTQDEVQKRN-- 783
MTTAARPTWAPAKGGNEQGGTRIFGPSQK+SSRDIASHTTLKPRK+GQDTQDE+++RN
Sbjct: 1 MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKDGQDTQDELKRRNLR 60
Query: 782 XXXXXXXXXXXXXXXXXXXXXXXXXXXSHLLLEGAKRDTEDRIFPRPXXXXXXXXXXXXX 603
HL LEG KRD ED I PR
Sbjct: 61 DELDERERRHFSSKNKSYNDDRDHGRSGHLFLEGTKRDIEDNIIPRSVDADDSDVEVNSD 120
Query: 602 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVRGNPLLNNNT 423
L+RGNPL+NN T
Sbjct: 121 DESDDDDDEDDTEALLAELEQIKKERAQEKLRKEQQQQEEDLKVKEAELMRGNPLINNPT 180
Query: 422 SAHIVKKRWDEDVVFKNQTRGETKATKRFINDTIRSDFHRK 300
S VK+RWD+DVVFKNQ RGETK KRFINDTIR+DFHR+
Sbjct: 181 S-FSVKRRWDDDVVFKNQARGETKLAKRFINDTIRNDFHRE 220