BLASTX nr result

ID: Coptis21_contig00000270 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000270
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536540.1| PREDICTED: cyclin-T1-4-like [Glycine max]          80   2e-13
ref|XP_002315785.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
emb|CBI26221.3| unnamed protein product [Vitis vinifera]               79   4e-13
ref|XP_002277920.1| PREDICTED: cyclin-T1-4 [Vitis vinifera]            79   4e-13
ref|XP_002517211.1| Cyclin-L1, putative [Ricinus communis] gi|22...    78   8e-13

>ref|XP_003536540.1| PREDICTED: cyclin-T1-4-like [Glycine max]
          Length = 372

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 39/58 (67%), Positives = 42/58 (72%)
 Frame = -3

Query: 439 LRSSLWLQFKPHHIXXXXXXXXAKILNFDLATHHGMWQEFQTTPSICQDVVKQLTELF 266
           LRSSLWLQFKPHHI        AK LN DLA +  +WQEFQTTPSI QDV +QL ELF
Sbjct: 315 LRSSLWLQFKPHHIAAGAAYLAAKFLNMDLAAYQNIWQEFQTTPSILQDVSQQLMELF 372


>ref|XP_002315785.1| predicted protein [Populus trichocarpa] gi|222864825|gb|EEF01956.1|
           predicted protein [Populus trichocarpa]
          Length = 181

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 38/58 (65%), Positives = 44/58 (75%)
 Frame = -3

Query: 439 LRSSLWLQFKPHHIXXXXXXXXAKILNFDLATHHGMWQEFQTTPSICQDVVKQLTELF 266
           LRSSLWLQFKPHHI        AK+LNFDLA +  +WQEF+TTP+I QDV +QL ELF
Sbjct: 124 LRSSLWLQFKPHHIAAGAAYLAAKLLNFDLAFYQNIWQEFETTPAILQDVSEQLMELF 181


>emb|CBI26221.3| unnamed protein product [Vitis vinifera]
          Length = 88

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 38/58 (65%), Positives = 44/58 (75%)
 Frame = -3

Query: 439 LRSSLWLQFKPHHIXXXXXXXXAKILNFDLATHHGMWQEFQTTPSICQDVVKQLTELF 266
           LRSSLWLQFKPHHI        AKILN D+A++  +WQEFQTTP+I QDV +QL ELF
Sbjct: 31  LRSSLWLQFKPHHIAAGAAYLAAKILNLDVASYQYIWQEFQTTPAILQDVAQQLMELF 88


>ref|XP_002277920.1| PREDICTED: cyclin-T1-4 [Vitis vinifera]
          Length = 363

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 38/58 (65%), Positives = 44/58 (75%)
 Frame = -3

Query: 439 LRSSLWLQFKPHHIXXXXXXXXAKILNFDLATHHGMWQEFQTTPSICQDVVKQLTELF 266
           LRSSLWLQFKPHHI        AKILN D+A++  +WQEFQTTP+I QDV +QL ELF
Sbjct: 306 LRSSLWLQFKPHHIAAGAAYLAAKILNLDVASYQYIWQEFQTTPAILQDVAQQLMELF 363


>ref|XP_002517211.1| Cyclin-L1, putative [Ricinus communis] gi|223543846|gb|EEF45374.1|
           Cyclin-L1, putative [Ricinus communis]
          Length = 403

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 37/58 (63%), Positives = 42/58 (72%)
 Frame = -3

Query: 439 LRSSLWLQFKPHHIXXXXXXXXAKILNFDLATHHGMWQEFQTTPSICQDVVKQLTELF 266
           LRSSLWLQFKPHHI        A+ LN DLA +  +WQEFQTTP+I QDV +QL ELF
Sbjct: 346 LRSSLWLQFKPHHIAAGAAYLAARFLNLDLACYQNIWQEFQTTPAIIQDVAQQLMELF 403


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