BLASTX nr result
ID: Coptis21_contig00000270
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00000270 (441 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003536540.1| PREDICTED: cyclin-T1-4-like [Glycine max] 80 2e-13 ref|XP_002315785.1| predicted protein [Populus trichocarpa] gi|2... 80 2e-13 emb|CBI26221.3| unnamed protein product [Vitis vinifera] 79 4e-13 ref|XP_002277920.1| PREDICTED: cyclin-T1-4 [Vitis vinifera] 79 4e-13 ref|XP_002517211.1| Cyclin-L1, putative [Ricinus communis] gi|22... 78 8e-13 >ref|XP_003536540.1| PREDICTED: cyclin-T1-4-like [Glycine max] Length = 372 Score = 79.7 bits (195), Expect = 2e-13 Identities = 39/58 (67%), Positives = 42/58 (72%) Frame = -3 Query: 439 LRSSLWLQFKPHHIXXXXXXXXAKILNFDLATHHGMWQEFQTTPSICQDVVKQLTELF 266 LRSSLWLQFKPHHI AK LN DLA + +WQEFQTTPSI QDV +QL ELF Sbjct: 315 LRSSLWLQFKPHHIAAGAAYLAAKFLNMDLAAYQNIWQEFQTTPSILQDVSQQLMELF 372 >ref|XP_002315785.1| predicted protein [Populus trichocarpa] gi|222864825|gb|EEF01956.1| predicted protein [Populus trichocarpa] Length = 181 Score = 79.7 bits (195), Expect = 2e-13 Identities = 38/58 (65%), Positives = 44/58 (75%) Frame = -3 Query: 439 LRSSLWLQFKPHHIXXXXXXXXAKILNFDLATHHGMWQEFQTTPSICQDVVKQLTELF 266 LRSSLWLQFKPHHI AK+LNFDLA + +WQEF+TTP+I QDV +QL ELF Sbjct: 124 LRSSLWLQFKPHHIAAGAAYLAAKLLNFDLAFYQNIWQEFETTPAILQDVSEQLMELF 181 >emb|CBI26221.3| unnamed protein product [Vitis vinifera] Length = 88 Score = 79.0 bits (193), Expect = 4e-13 Identities = 38/58 (65%), Positives = 44/58 (75%) Frame = -3 Query: 439 LRSSLWLQFKPHHIXXXXXXXXAKILNFDLATHHGMWQEFQTTPSICQDVVKQLTELF 266 LRSSLWLQFKPHHI AKILN D+A++ +WQEFQTTP+I QDV +QL ELF Sbjct: 31 LRSSLWLQFKPHHIAAGAAYLAAKILNLDVASYQYIWQEFQTTPAILQDVAQQLMELF 88 >ref|XP_002277920.1| PREDICTED: cyclin-T1-4 [Vitis vinifera] Length = 363 Score = 79.0 bits (193), Expect = 4e-13 Identities = 38/58 (65%), Positives = 44/58 (75%) Frame = -3 Query: 439 LRSSLWLQFKPHHIXXXXXXXXAKILNFDLATHHGMWQEFQTTPSICQDVVKQLTELF 266 LRSSLWLQFKPHHI AKILN D+A++ +WQEFQTTP+I QDV +QL ELF Sbjct: 306 LRSSLWLQFKPHHIAAGAAYLAAKILNLDVASYQYIWQEFQTTPAILQDVAQQLMELF 363 >ref|XP_002517211.1| Cyclin-L1, putative [Ricinus communis] gi|223543846|gb|EEF45374.1| Cyclin-L1, putative [Ricinus communis] Length = 403 Score = 77.8 bits (190), Expect = 8e-13 Identities = 37/58 (63%), Positives = 42/58 (72%) Frame = -3 Query: 439 LRSSLWLQFKPHHIXXXXXXXXAKILNFDLATHHGMWQEFQTTPSICQDVVKQLTELF 266 LRSSLWLQFKPHHI A+ LN DLA + +WQEFQTTP+I QDV +QL ELF Sbjct: 346 LRSSLWLQFKPHHIAAGAAYLAARFLNLDLACYQNIWQEFQTTPAIIQDVAQQLMELF 403